RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 PNMA6EA0A0J9YXQ4 647 aa21.76■■□□□ 1.07
TPM1-214ENST00000558544 RTKN2Q8IZC4 609 aa21.76■■□□□ 1.07
TPM1-214ENST00000558544 TAOK3Q9H2K8 898 aa21.76■■□□□ 1.07
TPM1-214ENST00000558544 GPSM2P81274 684 aa21.75■■□□□ 1.07
TPM1-214ENST00000558544 LDHAL6AQ6ZMR3 332 aa21.75■■□□□ 1.07
TPM1-214ENST00000558544 MPNDQ8N594 471 aa21.75■■□□□ 1.07
TPM1-214ENST00000558544 CNNM1Q9NRU3 951 aa21.75■■□□□ 1.07
TPM1-214ENST00000558544 MINPP1Q9UNW1 487 aa21.75■■□□□ 1.07
TPM1-214ENST00000558544 FKBP4Q02790 459 aaKnown RBP eCLIP21.74■■□□□ 1.07
TPM1-214ENST00000558544 PTPN12Q05209 780 aaKnown RBP21.74■■□□□ 1.07
TPM1-214ENST00000558544 CEP85Q6P2H3 762 aa21.74■■□□□ 1.07
TPM1-214ENST00000558544 DPP8Q6V1X1 898 aaPredicted RBP21.74■■□□□ 1.07
TPM1-214ENST00000558544 PUS3Q9BZE2 481 aaKnown RBP21.74■■□□□ 1.07
TPM1-214ENST00000558544 NSFL1CQ9UNZ2 370 aaKnown RBP21.74■■□□□ 1.07
TPM1-214ENST00000558544 PA2G4Q9UQ80 394 aaKnown RBP21.74■■□□□ 1.07
TPM1-214ENST00000558544 LTBP3Q9NS15 1303 aa21.74■■□□□ 1.07
TPM1-214ENST00000558544 IRX6P78412 446 aaPredicted RBP21.74■■□□□ 1.07
TPM1-214ENST00000558544 ATP8B2P98198 1209 aa21.74■■□□□ 1.07
TPM1-214ENST00000558544 GRIPAP1Q4V328 841 aa21.74■■□□□ 1.07
TPM1-214ENST00000558544 SIL1Q9H173 461 aa21.74■■□□□ 1.07
TPM1-214ENST00000558544 ANKIB1Q9P2G1 1089 aa21.74■■□□□ 1.07
TPM1-214ENST00000558544 XDHP47989 1333 aa21.73■■□□□ 1.07
TPM1-214ENST00000558544 CHRNDQ07001 517 aa21.73■■□□□ 1.07
TPM1-214ENST00000558544 LRRC24Q50LG9 513 aa21.73■■□□□ 1.07
TPM1-214ENST00000558544 PSMD1Q99460 953 aa21.73■■□□□ 1.07
TPM1-214ENST00000558544 PRELPP51888 382 aa21.72■■□□□ 1.07
TPM1-214ENST00000558544 ZNF277Q9NRM2 450 aaPredicted RBP21.72■■□□□ 1.07
TPM1-214ENST00000558544 POLA2Q14181 598 aa21.71■■□□□ 1.07
TPM1-214ENST00000558544 SSH3Q8TE77 659 aa21.71■■□□□ 1.07
TPM1-214ENST00000558544 COPRSQ9NQ92 184 aa21.71■■□□□ 1.07
TPM1-214ENST00000558544 PODXL2Q9NZ53 605 aa21.71■■□□□ 1.07
TPM1-214ENST00000558544 EYA2O00167 538 aa21.7■■□□□ 1.06
TPM1-214ENST00000558544 UFL1O94874 794 aa21.7■■□□□ 1.06
TPM1-214ENST00000558544 HELBQ8NG08 1087 aaPredicted RBP21.7■■□□□ 1.06
TPM1-214ENST00000558544 EXOC6Q8TAG9 804 aa21.7■■□□□ 1.06
TPM1-214ENST00000558544 RTFDC1Q9BY42 306 aaPredicted RBP21.7■■□□□ 1.06
TPM1-214ENST00000558544 ANKRD2Q9GZV1 360 aa21.7■■□□□ 1.06
TPM1-214ENST00000558544 POLLQ9UGP5 575 aa21.7■■□□□ 1.06
TPM1-214ENST00000558544 GGA1Q9UJY5 639 aa21.7■■□□□ 1.06
TPM1-214ENST00000558544 RIPOR2Q9Y4F9 1068 aa21.7■■□□□ 1.06
TPM1-214ENST00000558544 COL4A5P29400 1685 aa21.69■■□□□ 1.06
TPM1-214ENST00000558544 C6orf229H3BNL8 230 aa21.69■■□□□ 1.06
TPM1-214ENST00000558544 TAF5LO75529 589 aa21.69■■□□□ 1.06
TPM1-214ENST00000558544 LMNB1P20700 586 aa21.69■■□□□ 1.06
TPM1-214ENST00000558544 RPAP2Q8IXW5 612 aaPredicted RBP21.69■■□□□ 1.06
TPM1-214ENST00000558544 SUPT20HQ8NEM7 779 aa21.69■■□□□ 1.06
TPM1-214ENST00000558544 TBC1D16Q8TBP0 767 aa21.69■■□□□ 1.06
TPM1-214ENST00000558544 GPR101Q96P66 508 aaPredicted RBP21.69■■□□□ 1.06
TPM1-214ENST00000558544 MROH5Q6ZUA9 1318 aa21.68■■□□□ 1.06
TPM1-214ENST00000558544 METTL24Q5JXM2 366 aa21.68■■□□□ 1.06
TPM1-214ENST00000558544 ATG9AQ7Z3C6 839 aa21.68■■□□□ 1.06
TPM1-214ENST00000558544 RNF181Q9P0P0 153 aa21.68■■□□□ 1.06
TPM1-214ENST00000558544 WTIPA6NIX2 430 aaPredicted RBP21.67■■□□□ 1.06
TPM1-214ENST00000558544 CIAO1O76071 339 aa21.67■■□□□ 1.06
TPM1-214ENST00000558544 ATP2B4P23634 1241 aa21.67■■□□□ 1.06
TPM1-214ENST00000558544 IARSP41252 1262 aaKnown RBP21.67■■□□□ 1.06
TPM1-214ENST00000558544 C9orf131Q5VYM1 1079 aa21.67■■□□□ 1.06
TPM1-214ENST00000558544 SIRT2Q8IXJ6 389 aa21.67■■□□□ 1.06
TPM1-214ENST00000558544 FBXO3Q9UK99 471 aa21.67■■□□□ 1.06
TPM1-214ENST00000558544 PPIP5K2O43314 1243 aa21.66■■□□□ 1.06
TPM1-214ENST00000558544 AOC3Q16853 763 aa21.66■■□□□ 1.06
TPM1-214ENST00000558544 ARAP2Q8WZ64 1704 aa21.66■■□□□ 1.06
TPM1-214ENST00000558544 ZNF804BA4D1E1 1349 aa21.66■■□□□ 1.06
TPM1-214ENST00000558544 SNAP23O00161 211 aa21.65■■□□□ 1.06
TPM1-214ENST00000558544 HMMRO75330 724 aa21.65■■□□□ 1.06
TPM1-214ENST00000558544 KCNJ4P48050 445 aa21.65■■□□□ 1.06
TPM1-214ENST00000558544 EYA3Q99504 573 aa21.65■■□□□ 1.06
TPM1-214ENST00000558544 LEMD3Q9Y2U8 911 aa21.65■■□□□ 1.06
TPM1-214ENST00000558544 RIMBP2O15034 1052 aa21.64■■□□□ 1.06
TPM1-214ENST00000558544 IL15P40933 162 aaPredicted RBP21.64■■□□□ 1.06
TPM1-214ENST00000558544 WASHC4Q2M389 1173 aa21.64■■□□□ 1.06
TPM1-214ENST00000558544 LARGE2Q8N3Y3 721 aa21.64■■□□□ 1.06
TPM1-214ENST00000558544 VGLL2Q8N8G2 317 aa21.64■■□□□ 1.06
TPM1-214ENST00000558544 PCDHB15Q9Y5E8 787 aa21.64■■□□□ 1.06
TPM1-214ENST00000558544 MED23Q9ULK4 1368 aa21.63■■□□□ 1.05
TPM1-214ENST00000558544 SURF6O75683 361 aaKnown RBP21.63■■□□□ 1.05
TPM1-214ENST00000558544 KIAA2012Q0VF49 1180 aa21.63■■□□□ 1.05
TPM1-214ENST00000558544 G3BP1Q13283 466 aaKnown RBP eCLIP21.63■■□□□ 1.05
TPM1-214ENST00000558544 MYH13Q9UKX3 1938 aa21.62■■□□□ 1.05
TPM1-214ENST00000558544 PSME4Q14997 1843 aa21.62■■□□□ 1.05
TPM1-214ENST00000558544 PDE8BO95263 885 aa21.62■■□□□ 1.05
TPM1-214ENST00000558544 KLRK1P26718 216 aa21.62■■□□□ 1.05
TPM1-214ENST00000558544 OS9Q13438 667 aaPredicted RBP21.62■■□□□ 1.05
TPM1-214ENST00000558544 SCN9AQ15858 1988 aa21.62■■□□□ 1.05
TPM1-214ENST00000558544 ZC3H12CQ9C0D7 883 aaKnown RBP21.61■■□□□ 1.05
TPM1-214ENST00000558544 VPS33BQ9H267 617 aa21.61■■□□□ 1.05
TPM1-214ENST00000558544 CEP126Q9P2H0 1117 aa21.61■■□□□ 1.05
TPM1-214ENST00000558544 EXOC6BQ9Y2D4 811 aa21.61■■□□□ 1.05
TPM1-214ENST00000558544 NOP58Q9Y2X3 529 aaKnown RBP21.61■■□□□ 1.05
TPM1-214ENST00000558544 AAMPQ13685 434 aa21.61■■□□□ 1.05
TPM1-214ENST00000558544 JDP2Q8WYK2 163 aa21.61■■□□□ 1.05
TPM1-214ENST00000558544 TFCP2Q12800 502 aa21.6■■□□□ 1.05
TPM1-214ENST00000558544 UBE4AQ14139 1066 aa21.6■■□□□ 1.05
TPM1-214ENST00000558544 TXNRD3Q86VQ6 643 aa21.6■■□□□ 1.05
TPM1-214ENST00000558544 NIM1KQ8IY84 436 aa21.6■■□□□ 1.05
TPM1-214ENST00000558544 IRS2Q9Y4H2 1338 aa21.59■■□□□ 1.05
TPM1-214ENST00000558544 SASH1O94885 1247 aa21.59■■□□□ 1.05
TPM1-214ENST00000558544 PUM3Q15397 648 aaKnown RBP21.59■■□□□ 1.05
TPM1-214ENST00000558544 DOK7Q18PE1 504 aa21.59■■□□□ 1.05
TPM1-214ENST00000558544 DBNDD1Q9H9R9 158 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms