RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 STX6O43752 255 aa12.62□□□□□ -0.39
TPM1-210ENST00000558264 CYP21A2P08686 494 aa12.62□□□□□ -0.39
TPM1-210ENST00000558264 RPS6KB1P23443 525 aa12.62□□□□□ -0.39
TPM1-210ENST00000558264 KCNQ4P56696 695 aa12.62□□□□□ -0.39
TPM1-210ENST00000558264 TTC39AQ5SRH9 613 aa12.62□□□□□ -0.39
TPM1-210ENST00000558264 CNPY2Q9Y2B0 182 aa12.62□□□□□ -0.39
TPM1-210ENST00000558264 UBN2Q6ZU65 1347 aa12.61□□□□□ -0.39
TPM1-210ENST00000558264 IRS4O14654 1257 aaPredicted RBP12.61□□□□□ -0.39
TPM1-210ENST00000558264 PSMA5P28066 241 aa12.61□□□□□ -0.39
TPM1-210ENST00000558264 TOB2Q14106 344 aaPredicted RBP12.61□□□□□ -0.39
TPM1-210ENST00000558264 METTL24Q5JXM2 366 aa12.61□□□□□ -0.39
TPM1-210ENST00000558264 MARCH10Q8NA82 808 aaPredicted RBP12.61□□□□□ -0.39
TPM1-210ENST00000558264 SPATA31A1Q5TZJ5 1347 aa12.61□□□□□ -0.39
TPM1-210ENST00000558264 CIAO1O76071 339 aa12.61□□□□□ -0.39
TPM1-210ENST00000558264 ZSCAN22P10073 491 aaPredicted RBP12.61□□□□□ -0.39
TPM1-210ENST00000558264 ATP6V1AP38606 617 aa12.61□□□□□ -0.39
TPM1-210ENST00000558264 TRIM28Q13263 835 aaKnown RBP12.61□□□□□ -0.39
TPM1-210ENST00000558264 LDHAL6AQ6ZMR3 332 aa12.61□□□□□ -0.39
TPM1-210ENST00000558264 HELBQ8NG08 1087 aaPredicted RBP12.61□□□□□ -0.39
TPM1-210ENST00000558264 TTLL11Q8NHH1 800 aa12.61□□□□□ -0.39
TPM1-210ENST00000558264 SYCE3A1L190 88 aa12.6□□□□□ -0.39
TPM1-210ENST00000558264 KCNQ2O43526 872 aa12.6□□□□□ -0.39
TPM1-210ENST00000558264 HCLS1P14317 486 aaPredicted RBP12.6□□□□□ -0.39
TPM1-210ENST00000558264 CTSWP56202 376 aa12.6□□□□□ -0.39
TPM1-210ENST00000558264 STOX1Q6ZVD7 989 aa12.6□□□□□ -0.39
TPM1-210ENST00000558264 USP48Q86UV5 1035 aa12.6□□□□□ -0.39
TPM1-210ENST00000558264 CNNM1Q9NRU3 951 aa12.6□□□□□ -0.39
TPM1-210ENST00000558264 DOT1LQ8TEK3 1739 aa12.6□□□□□ -0.39
TPM1-210ENST00000558264 M0R2C6 588 aa12.6□□□□□ -0.39
TPM1-210ENST00000558264 SNAP23O00161 211 aa12.6□□□□□ -0.39
TPM1-210ENST00000558264 FIBPO43427 364 aa12.6□□□□□ -0.39
TPM1-210ENST00000558264 PPFIA3O75145 1194 aa12.6□□□□□ -0.39
TPM1-210ENST00000558264 CSF1RP07333 972 aa12.6□□□□□ -0.39
TPM1-210ENST00000558264 SMIM5Q71RC9 77 aa12.6□□□□□ -0.39
TPM1-210ENST00000558264 FERMT3Q86UX7 667 aa12.6□□□□□ -0.39
TPM1-210ENST00000558264 GPR108Q9NPR9 543 aa12.6□□□□□ -0.39
TPM1-210ENST00000558264 MAST3O60307 1309 aa12.59□□□□□ -0.39
TPM1-210ENST00000558264 ZAP70P43403 619 aa12.59□□□□□ -0.39
TPM1-210ENST00000558264 CCDC158Q5M9N0 1113 aa12.59□□□□□ -0.39
TPM1-210ENST00000558264 TTLL5Q6EMB2 1281 aa12.59□□□□□ -0.39
TPM1-210ENST00000558264 CHST3Q7LGC8 479 aa12.59□□□□□ -0.39
TPM1-210ENST00000558264 NEK1Q96PY6 1258 aa12.59□□□□□ -0.39
TPM1-210ENST00000558264 JCADQ9P266 1359 aa12.59□□□□□ -0.39
TPM1-210ENST00000558264 AHDC1Q5TGY3 1603 aaPredicted RBP12.59□□□□□ -0.39
TPM1-210ENST00000558264 HSP90B1P14625 803 aaKnown RBP12.59□□□□□ -0.39
TPM1-210ENST00000558264 CRKLP46109 303 aaKnown RBP12.59□□□□□ -0.39
TPM1-210ENST00000558264 WASHC4Q2M389 1173 aa12.59□□□□□ -0.39
TPM1-210ENST00000558264 USPL1Q5W0Q7 1092 aa12.59□□□□□ -0.39
TPM1-210ENST00000558264 FAM173BQ6P4H8 233 aa12.59□□□□□ -0.39
TPM1-210ENST00000558264 ZSCAN31Q96LW9 406 aaPredicted RBP12.59□□□□□ -0.39
TPM1-210ENST00000558264 SH2B1Q9NRF2 756 aaPredicted RBP12.59□□□□□ -0.39
TPM1-210ENST00000558264 LRP6O75581 1613 aa12.58□□□□□ -0.39
TPM1-210ENST00000558264 F13A1P00488 732 aa12.58□□□□□ -0.4
TPM1-210ENST00000558264 ITPK1Q13572 414 aa12.58□□□□□ -0.4
TPM1-210ENST00000558264 ATP2B3Q16720 1220 aa12.58□□□□□ -0.4
TPM1-210ENST00000558264 Q6ZUG5 572 aa12.58□□□□□ -0.4
TPM1-210ENST00000558264 OSBP2Q969R2 916 aa12.58□□□□□ -0.4
TPM1-210ENST00000558264 HMG20BQ9P0W2 317 aa12.58□□□□□ -0.4
TPM1-210ENST00000558264 U3KPZ7 1027 aaPredicted RBP12.58□□□□□ -0.4
TPM1-210ENST00000558264 PALLDQ8WX93 1383 aa12.58□□□□□ -0.4
TPM1-210ENST00000558264 RIC1Q4ADV7 1423 aa12.58□□□□□ -0.4
TPM1-210ENST00000558264 PLCH1Q4KWH8 1693 aa12.58□□□□□ -0.4
TPM1-210ENST00000558264 ANKRD18BA2A2Z9 1011 aa12.58□□□□□ -0.4
TPM1-210ENST00000558264 ZMYM1Q5SVZ6 1142 aa12.58□□□□□ -0.4
TPM1-210ENST00000558264 INTS5Q6P9B9 1019 aaKnown RBP12.58□□□□□ -0.4
TPM1-210ENST00000558264 MTMR6Q9Y217 621 aa12.58□□□□□ -0.4
TPM1-210ENST00000558264 SH3TC1Q8TE82 1336 aa12.58□□□□□ -0.4
TPM1-210ENST00000558264 RNF113AO15541 343 aaKnown RBP12.57□□□□□ -0.4
TPM1-210ENST00000558264 JAK2O60674 1132 aa12.57□□□□□ -0.4
TPM1-210ENST00000558264 HSPD1P10809 573 aaKnown RBP12.57□□□□□ -0.4
TPM1-210ENST00000558264 FOSBP53539 338 aa12.57□□□□□ -0.4
TPM1-210ENST00000558264 HAND2P61296 217 aa12.57□□□□□ -0.4
TPM1-210ENST00000558264 FGD1P98174 961 aa12.57□□□□□ -0.4
TPM1-210ENST00000558264 DNM1Q05193 864 aaKnown RBP12.57□□□□□ -0.4
TPM1-210ENST00000558264 FAM98CQ17RN3 349 aaKnown RBP12.57□□□□□ -0.4
TPM1-210ENST00000558264 SUSD4Q5VX71 490 aa12.57□□□□□ -0.4
TPM1-210ENST00000558264 PLA2G12BQ9BX93 195 aa12.57□□□□□ -0.4
TPM1-210ENST00000558264 NAP1L2Q9ULW6 460 aaPredicted RBP12.57□□□□□ -0.4
TPM1-210ENST00000558264 RIPOR2Q9Y4F9 1068 aa12.57□□□□□ -0.4
TPM1-210ENST00000558264 TCHHQ07283 1943 aa12.57□□□□□ -0.4
TPM1-210ENST00000558264 LOC102724428A0A0B4J2F2 783 aa12.57□□□□□ -0.4
TPM1-210ENST00000558264 IL6STP40189 918 aaPredicted RBP12.57□□□□□ -0.4
TPM1-210ENST00000558264 NASPP49321 788 aaPredicted RBP12.57□□□□□ -0.4
TPM1-210ENST00000558264 SIK1P57059 783 aa12.57□□□□□ -0.4
TPM1-210ENST00000558264 CDC37L1Q7L3B6 337 aa12.57□□□□□ -0.4
TPM1-210ENST00000558264 BRF1Q92994 677 aa12.57□□□□□ -0.4
TPM1-210ENST00000558264 RBSNQ9H1K0 784 aa12.57□□□□□ -0.4
TPM1-210ENST00000558264 AKAP2Q9Y2D5 859 aa12.57□□□□□ -0.4
TPM1-210ENST00000558264 SLIT2O94813 1529 aa12.56□□□□□ -0.4
TPM1-210ENST00000558264 LARP1BQ659C4 914 aaKnown RBP12.56□□□□□ -0.4
TPM1-210ENST00000558264 CCDC87Q9NVE4 849 aa12.56□□□□□ -0.4
TPM1-210ENST00000558264 PHLPP1O60346 1717 aa12.56□□□□□ -0.4
TPM1-210ENST00000558264 MCAMP43121 646 aa12.56□□□□□ -0.4
TPM1-210ENST00000558264 ZNF445P59923 1031 aa12.56□□□□□ -0.4
TPM1-210ENST00000558264 DDX11Q96FC9 970 aa12.56□□□□□ -0.4
TPM1-210ENST00000558264 SEC31BQ9NQW1 1179 aa12.56□□□□□ -0.4
TPM1-210ENST00000558264 HELLSQ9NRZ9 838 aa12.56□□□□□ -0.4
TPM1-210ENST00000558264 COL22A1Q8NFW1 1626 aaPredicted RBP12.56□□□□□ -0.4
TPM1-210ENST00000558264 CDHR2Q9BYE9 1310 aa12.56□□□□□ -0.4
TPM1-210ENST00000558264 RFX7Q2KHR2 1363 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms