RNA–Protein interactions for RNA: ENST00000557947.5

TCF12-208, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-208	ENST00000557947	CASP7	P55210	303 aa		27.93	■■■□□ 2.06
TCF12-208	ENST00000557947	EYA3	Q99504	573 aa		27.93	■■■□□ 2.06
TCF12-208	ENST00000557947	BCL2L13	Q9BXK5	485 aa		27.93	■■■□□ 2.06
TCF12-208	ENST00000557947	RTL9	Q8NET4	1388 aa		27.93	■■■□□ 2.06
TCF12-208	ENST00000557947	TRAF5	O00463	557 aa		27.92	■■■□□ 2.06
TCF12-208	ENST00000557947	ECE2	O60344	883 aa		27.92	■■■□□ 2.06
TCF12-208	ENST00000557947	FKBP5	Q13451	457 aa	Predicted RBP	27.92	■■■□□ 2.06
TCF12-208	ENST00000557947	GCKR	Q14397	625 aa		27.92	■■■□□ 2.06
TCF12-208	ENST00000557947	UBE3B	Q7Z3V4	1068 aa		27.92	■■■□□ 2.06
TCF12-208	ENST00000557947	ANKRD18A	Q8IVF6	992 aa		27.92	■■■□□ 2.06
TCF12-208	ENST00000557947	TRPM4	Q8TD43	1214 aa		27.92	■■■□□ 2.06
TCF12-208	ENST00000557947	DNAAF4	Q8WXU2	420 aa		27.92	■■■□□ 2.06
TCF12-208	ENST00000557947	GREM2	Q9H772	168 aa		27.92	■■■□□ 2.06
TCF12-208	ENST00000557947	PGAP2	Q9UHJ9	254 aa		27.92	■■■□□ 2.06
TCF12-208	ENST00000557947	CNOT7	Q9UIV1	285 aa	Known RBP	27.92	■■■□□ 2.06
TCF12-208	ENST00000557947	UFL1	O94874	794 aa		27.91	■■■□□ 2.06
TCF12-208	ENST00000557947	ANKIB1	Q9P2G1	1089 aa		27.91	■■■□□ 2.06
TCF12-208	ENST00000557947	CACNA1F	O60840	1977 aa		27.91	■■■□□ 2.06
TCF12-208	ENST00000557947	ZNF521	Q96K83	1311 aa		27.91	■■■□□ 2.06
TCF12-208	ENST00000557947	WTIP	A6NIX2	430 aa	Predicted RBP	27.9	■■■□□ 2.06
TCF12-208	ENST00000557947	VEGFB	P49765	207 aa		27.9	■■■□□ 2.06
TCF12-208	ENST00000557947	GGA1	Q9UJY5	639 aa		27.9	■■■□□ 2.06
TCF12-208	ENST00000557947	MYH3	P11055	1940 aa		27.9	■■■□□ 2.06
TCF12-208	ENST00000557947	SCN9A	Q15858	1988 aa		27.9	■■■□□ 2.06
TCF12-208	ENST00000557947	COL13A1	Q5TAT6	717 aa	Predicted RBP	27.89	■■■□□ 2.06
TCF12-208	ENST00000557947	LINS1	Q8NG48	757 aa		27.89	■■■□□ 2.06
TCF12-208	ENST00000557947	DPF2	Q92785	391 aa		27.89	■■■□□ 2.06
TCF12-208	ENST00000557947	ZC3H12C	Q9C0D7	883 aa	Known RBP	27.89	■■■□□ 2.06
TCF12-208	ENST00000557947	RASSF10	A6NK89	507 aa		27.88	■■■□□ 2.05
TCF12-208	ENST00000557947	CST9	Q5W186	159 aa		27.88	■■■□□ 2.05
TCF12-208	ENST00000557947	MICALL2	Q8IY33	904 aa		27.88	■■■□□ 2.05
TCF12-208	ENST00000557947	CDC5L	Q99459	802 aa	Known RBP	27.88	■■■□□ 2.05
TCF12-208	ENST00000557947	PLA2G12B	Q9BX93	195 aa		27.88	■■■□□ 2.05
TCF12-208	ENST00000557947	MYH16	Q9H6N6	1097 aa		27.88	■■■□□ 2.05
TCF12-208	ENST00000557947		F6X3S4	739 aa		27.87	■■■□□ 2.05
TCF12-208	ENST00000557947	XDH	P47989	1333 aa		27.87	■■■□□ 2.05
TCF12-208	ENST00000557947	GLIS2	Q9BZE0	524 aa	Predicted RBP	27.86	■■■□□ 2.05
TCF12-208	ENST00000557947	BSDC1	Q9NW68	430 aa	Predicted RBP	27.86	■■■□□ 2.05
TCF12-208	ENST00000557947	MINPP1	Q9UNW1	487 aa		27.86	■■■□□ 2.05
TCF12-208	ENST00000557947		H7C1D1	291 aa		27.85	■■■□□ 2.05
TCF12-208	ENST00000557947	EGFR	P00533	1210 aa		27.85	■■■□□ 2.05
TCF12-208	ENST00000557947	DEFB115	Q30KQ5	88 aa		27.85	■■■□□ 2.05
TCF12-208	ENST00000557947	SAMD7	Q7Z3H4	446 aa		27.85	■■■□□ 2.05
TCF12-208	ENST00000557947	ZC3H15	Q8WU90	426 aa	Known RBP	27.85	■■■□□ 2.05
TCF12-208	ENST00000557947	CSF1R	P07333	972 aa		27.84	■■■□□ 2.05
TCF12-208	ENST00000557947	VIL1	P09327	827 aa	Known RBP	27.84	■■■□□ 2.05
TCF12-208	ENST00000557947	ATP2B4	P23634	1241 aa		27.84	■■■□□ 2.05
TCF12-208	ENST00000557947	BEND3	Q5T5X7	828 aa		27.84	■■■□□ 2.05
TCF12-208	ENST00000557947	SPEF2	Q9C093	1822 aa		27.83	■■■□□ 2.05
TCF12-208	ENST00000557947	TRPM7	Q96QT4	1865 aa		27.83	■■■□□ 2.05
TCF12-208	ENST00000557947	RPS12	P25398	132 aa	Known RBP	27.83	■■■□□ 2.05
TCF12-208	ENST00000557947	ABT1	Q9ULW3	272 aa	Known RBP	27.83	■■■□□ 2.05
TCF12-208	ENST00000557947	FAM161A	Q3B820	660 aa		27.82	■■■□□ 2.04
TCF12-208	ENST00000557947	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	27.81	■■■□□ 2.04
TCF12-208	ENST00000557947	ITGA6	P23229	1130 aa		27.8	■■■□□ 2.04
TCF12-208	ENST00000557947	CCT4	P50991	539 aa	Known RBP	27.79	■■■□□ 2.04
TCF12-208	ENST00000557947	FOXO4	P98177	505 aa		27.79	■■■□□ 2.04
TCF12-208	ENST00000557947	DLK2	Q6UY11	383 aa		27.79	■■■□□ 2.04
TCF12-208	ENST00000557947	WDR33	Q9C0J8	1336 aa	Known RBP	27.78	■■■□□ 2.04
TCF12-208	ENST00000557947		G3V3G9	751 aa		27.78	■■■□□ 2.04
TCF12-208	ENST00000557947	DCAF8	Q5TAQ9	597 aa		27.78	■■■□□ 2.04
TCF12-208	ENST00000557947	TLL2	Q9Y6L7	1015 aa		27.78	■■■□□ 2.04
TCF12-208	ENST00000557947	PSME4	Q14997	1843 aa		27.78	■■■□□ 2.04
TCF12-208	ENST00000557947	ZNF609	O15014	1411 aa		27.77	■■■□□ 2.04
TCF12-208	ENST00000557947	MED23	Q9ULK4	1368 aa		27.77	■■■□□ 2.04
TCF12-208	ENST00000557947	FOXN1	O15353	648 aa		27.77	■■■□□ 2.04
TCF12-208	ENST00000557947	CELF2	O95319	508 aa	Known RBP	27.77	■■■□□ 2.04
TCF12-208	ENST00000557947	RSBN1L	Q6PCB5	846 aa	Predicted RBP	27.77	■■■□□ 2.04
TCF12-208	ENST00000557947	CDC37L1	Q7L3B6	337 aa		27.77	■■■□□ 2.04
TCF12-208	ENST00000557947	TXNRD3	Q86VQ6	643 aa		27.77	■■■□□ 2.04
TCF12-208	ENST00000557947	GML	Q99445	158 aa		27.77	■■■□□ 2.04
TCF12-208	ENST00000557947	IGHMBP2	P38935	993 aa	Known RBP	27.76	■■■□□ 2.03
TCF12-208	ENST00000557947	RBM26	Q5T8P6	1007 aa	Known RBP	27.76	■■■□□ 2.03
TCF12-208	ENST00000557947	USP48	Q86UV5	1035 aa		27.76	■■■□□ 2.03
TCF12-208	ENST00000557947	WBP1L	Q9NX94	342 aa		27.76	■■■□□ 2.03
TCF12-208	ENST00000557947	EPHA10	Q5JZY3	1008 aa		27.75	■■■□□ 2.03
TCF12-208	ENST00000557947	PODN	Q7Z5L7	613 aa		27.75	■■■□□ 2.03
TCF12-208	ENST00000557947	CYP4F22	Q6NT55	531 aa		27.74	■■■□□ 2.03
TCF12-208	ENST00000557947	SAPCD2	Q86UD0	394 aa		27.74	■■■□□ 2.03
TCF12-208	ENST00000557947	CAPNS2	Q96L46	248 aa		27.74	■■■□□ 2.03
TCF12-208	ENST00000557947	ASTN2	O75129	1339 aa	Predicted RBP	27.73	■■■□□ 2.03
TCF12-208	ENST00000557947	KLRK1	P26718	216 aa		27.73	■■■□□ 2.03
TCF12-208	ENST00000557947	ZNF280A	P59817	542 aa	Predicted RBP	27.73	■■■□□ 2.03
TCF12-208	ENST00000557947	KIF4B	Q2VIQ3	1234 aa		27.73	■■■□□ 2.03
TCF12-208	ENST00000557947	AGBL3	Q8NEM8	1001 aa		27.73	■■■□□ 2.03
TCF12-208	ENST00000557947	LEMD3	Q9Y2U8	911 aa		27.73	■■■□□ 2.03
TCF12-208	ENST00000557947	ZNF646	O15015	1829 aa	Predicted RBP	27.72	■■■□□ 2.03
TCF12-208	ENST00000557947	POLR2A	P24928	1970 aa	Known RBP	27.72	■■■□□ 2.03
TCF12-208	ENST00000557947	THSD7B	Q9C0I4	1608 aa		27.72	■■■□□ 2.03
TCF12-208	ENST00000557947	USP17L3	A6NCW0	530 aa		27.72	■■■□□ 2.03
TCF12-208	ENST00000557947	USP17L4	A6NCW7	530 aa		27.72	■■■□□ 2.03
TCF12-208	ENST00000557947	USP17L1	Q7RTZ2	530 aa		27.72	■■■□□ 2.03
TCF12-208	ENST00000557947	MPHOSPH8	Q99549	860 aa		27.72	■■■□□ 2.03
TCF12-208	ENST00000557947	GRM8	O00222	908 aa		27.71	■■■□□ 2.03
TCF12-208	ENST00000557947	MRPL50	Q8N5N7	158 aa	Known RBP	27.71	■■■□□ 2.03
TCF12-208	ENST00000557947	ZNF408	Q9H9D4	720 aa		27.71	■■■□□ 2.03
TCF12-208	ENST00000557947	ZNF804B	A4D1E1	1349 aa		27.7	■■■□□ 2.03
TCF12-208	ENST00000557947	ANKRD18B	A2A2Z9	1011 aa		27.7	■■■□□ 2.02
TCF12-208	ENST00000557947	CHRND	Q07001	517 aa		27.7	■■■□□ 2.02
TCF12-208	ENST00000557947	LMBR1L	Q6UX01	489 aa		27.7	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms