RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 VIL1P09327 827 aaKnown RBP16.03■□□□□ 0.16
SNX6-209ENST00000557265 KIF4BQ2VIQ3 1234 aa16.03■□□□□ 0.16
SNX6-209ENST00000557265 SULF1Q8IWU6 871 aa16.03■□□□□ 0.16
SNX6-209ENST00000557265 ZC3H12CQ9C0D7 883 aaKnown RBP16.03■□□□□ 0.16
SNX6-209ENST00000557265 RNF186Q9NXI6 227 aa16.03■□□□□ 0.16
SNX6-209ENST00000557265 RALBP1Q15311 655 aa16.02■□□□□ 0.16
SNX6-209ENST00000557265 HYPKQ9NX55 129 aa16.02■□□□□ 0.16
SNX6-209ENST00000557265 GGA3Q9NZ52 723 aa16.02■□□□□ 0.16
SNX6-209ENST00000557265 TRIM35Q9UPQ4 493 aa16.02■□□□□ 0.16
SNX6-209ENST00000557265 ANKRD36CQ5JPF3 1778 aa16.02■□□□□ 0.15
SNX6-209ENST00000557265 CASP8AP2Q9UKL3 1982 aa16.02■□□□□ 0.15
SNX6-209ENST00000557265 ASTN2O75129 1339 aaPredicted RBP16.01■□□□□ 0.15
SNX6-209ENST00000557265 LAMB2P55268 1798 aa16.01■□□□□ 0.15
SNX6-209ENST00000557265 G3V3G9 751 aa16.01■□□□□ 0.15
SNX6-209ENST00000557265 HOXB7P09629 217 aa16.01■□□□□ 0.15
SNX6-209ENST00000557265 TRIM28Q13263 835 aaKnown RBP16.01■□□□□ 0.15
SNX6-209ENST00000557265 DCAF8Q5TAQ9 597 aa16.01■□□□□ 0.15
SNX6-209ENST00000557265 CSRNP1Q96S65 589 aa16.01■□□□□ 0.15
SNX6-209ENST00000557265 UFL1O94874 794 aa16■□□□□ 0.15
SNX6-209ENST00000557265 SLC10A3P09131 477 aa16■□□□□ 0.15
SNX6-209ENST00000557265 CDCA5Q96FF9 252 aa16■□□□□ 0.15
SNX6-209ENST00000557265 SEC31BQ9NQW1 1179 aa16■□□□□ 0.15
SNX6-209ENST00000557265 PODXL2Q9NZ53 605 aa16■□□□□ 0.15
SNX6-209ENST00000557265 ANKIB1Q9P2G1 1089 aa16■□□□□ 0.15
SNX6-209ENST00000557265 SCARF1Q14162 830 aa15.99■□□□□ 0.15
SNX6-209ENST00000557265 DUSP27Q5VZP5 1158 aa15.99■□□□□ 0.15
SNX6-209ENST00000557265 ZBTB38Q8NAP3 1195 aaPredicted RBP15.99■□□□□ 0.15
SNX6-209ENST00000557265 RUNDC1Q96C34 613 aa15.99■□□□□ 0.15
SNX6-209ENST00000557265 TAF1P21675 1872 aa15.99■□□□□ 0.15
SNX6-209ENST00000557265 LRRC37AA6NMS7 1700 aa15.98■□□□□ 0.15
SNX6-209ENST00000557265 SOX10P56693 466 aa15.98■□□□□ 0.15
SNX6-209ENST00000557265 ZNF280AP59817 542 aaPredicted RBP15.98■□□□□ 0.15
SNX6-209ENST00000557265 ANGEL2Q5VTE6 544 aaKnown RBP15.98■□□□□ 0.15
SNX6-209ENST00000557265 RIC3Q7Z5B4 369 aa15.98■□□□□ 0.15
SNX6-209ENST00000557265 GGA1Q9UJY5 639 aa15.98■□□□□ 0.15
SNX6-209ENST00000557265 COL4A1P02462 1669 aa15.98■□□□□ 0.15
SNX6-209ENST00000557265 RSBN1LQ6PCB5 846 aaPredicted RBP15.97■□□□□ 0.15
SNX6-209ENST00000557265 AGBL3Q8NEM8 1001 aa15.97■□□□□ 0.15
SNX6-209ENST00000557265 HSP90B1P14625 803 aaKnown RBP15.96■□□□□ 0.15
SNX6-209ENST00000557265 GOLGA2Q08379 1002 aa15.96■□□□□ 0.15
SNX6-209ENST00000557265 CCDC152Q4G0S7 254 aa15.96■□□□□ 0.15
SNX6-209ENST00000557265 CTU1Q7Z7A3 348 aaKnown RBP15.96■□□□□ 0.15
SNX6-209ENST00000557265 RASAL3Q86YV0 1011 aa15.96■□□□□ 0.15
SNX6-209ENST00000557265 JARID2Q92833 1246 aaPredicted RBP15.96■□□□□ 0.15
SNX6-209ENST00000557265 CCDC85AQ96PX6 553 aaPredicted RBP15.96■□□□□ 0.15
SNX6-209ENST00000557265 PHAXQ9H814 394 aaKnown RBP15.96■□□□□ 0.15
SNX6-209ENST00000557265 DDX60Q8IY21 1712 aaKnown RBP15.95■□□□□ 0.14
SNX6-209ENST00000557265 USP17L8P0C7I0 530 aa15.95■□□□□ 0.14
SNX6-209ENST00000557265 FKBP1BP68106 108 aa15.95■□□□□ 0.14
SNX6-209ENST00000557265 WDR43Q15061 677 aaKnown RBP eCLIP15.95■□□□□ 0.14
SNX6-209ENST00000557265 REM2Q8IYK8 340 aaPredicted RBP15.95■□□□□ 0.14
SNX6-209ENST00000557265 GMLQ99445 158 aa15.95■□□□□ 0.14
SNX6-209ENST00000557265 MYD88Q99836 296 aa15.95■□□□□ 0.14
SNX6-209ENST00000557265 MYOZ2Q9NPC6 264 aa15.95■□□□□ 0.14
SNX6-209ENST00000557265 MBIPQ9NS73 344 aa15.95■□□□□ 0.14
SNX6-209ENST00000557265 PCCAP05165 728 aaPredicted RBP15.94■□□□□ 0.14
SNX6-209ENST00000557265 MOB2Q70IA6 237 aa15.94■□□□□ 0.14
SNX6-209ENST00000557265 CCDC191Q8NCU4 936 aa15.94■□□□□ 0.14
SNX6-209ENST00000557265 PCDH10Q9P2E7 1040 aa15.94■□□□□ 0.14
SNX6-209ENST00000557265 ADAMTS8Q9UP79 889 aa15.94■□□□□ 0.14
SNX6-209ENST00000557265 SCAF8Q9UPN6 1271 aaKnown RBP15.94■□□□□ 0.14
SNX6-209ENST00000557265 MYBBP1AQ9BQG0 1328 aaKnown RBP15.94■□□□□ 0.14
SNX6-209ENST00000557265 ELL2O00472 640 aaPredicted RBP15.93■□□□□ 0.14
SNX6-209ENST00000557265 PDE8AO60658 829 aa15.93■□□□□ 0.14
SNX6-209ENST00000557265 XDHP47989 1333 aa15.93■□□□□ 0.14
SNX6-209ENST00000557265 USP17L3A6NCW0 530 aa15.92■□□□□ 0.14
SNX6-209ENST00000557265 USP17L4A6NCW7 530 aa15.92■□□□□ 0.14
SNX6-209ENST00000557265 UBE2Q2LH0YL09 131 aa15.92■□□□□ 0.14
SNX6-209ENST00000557265 ATP2B4P23634 1241 aa15.92■□□□□ 0.14
SNX6-209ENST00000557265 PRAMEF18Q5VWM3 479 aa15.92■□□□□ 0.14
SNX6-209ENST00000557265 USP17L1Q7RTZ2 530 aa15.92■□□□□ 0.14
SNX6-209ENST00000557265 PODNQ7Z5L7 613 aa15.92■□□□□ 0.14
SNX6-209ENST00000557265 ANKRD18AQ8IVF6 992 aa15.92■□□□□ 0.14
SNX6-209ENST00000557265 CWC25Q9NXE8 425 aaPredicted RBP15.92■□□□□ 0.14
SNX6-209ENST00000557265 PITPNM2Q9BZ72 1349 aa15.92■□□□□ 0.14
SNX6-209ENST00000557265 PDE4DIPQ5VU43 2346 aa15.91■□□□□ 0.14
SNX6-209ENST00000557265 WTIPA6NIX2 430 aaPredicted RBP15.91■□□□□ 0.14
SNX6-209ENST00000557265 ZNF853P0CG23 659 aa15.91■□□□□ 0.14
SNX6-209ENST00000557265 HPS5Q9UPZ3 1129 aa15.91■□□□□ 0.14
SNX6-209ENST00000557265 ZNF609O15014 1411 aa15.91■□□□□ 0.14
SNX6-209ENST00000557265 TBC1D8O95759 1140 aa15.9■□□□□ 0.14
SNX6-209ENST00000557265 NBPF9Q3BBW0 867 aa15.9■□□□□ 0.14
SNX6-209ENST00000557265 METTL22Q9BUU2 404 aaPredicted RBP15.9■□□□□ 0.14
SNX6-209ENST00000557265 HDAC9Q9UKV0 1011 aa15.9■□□□□ 0.14
SNX6-209ENST00000557265 POLR2AP24928 1970 aaKnown RBP15.89■□□□□ 0.13
SNX6-209ENST00000557265 DDX10Q13206 875 aaKnown RBP15.89■□□□□ 0.13
SNX6-209ENST00000557265 TTLL12Q14166 644 aaPredicted RBP15.89■□□□□ 0.13
SNX6-209ENST00000557265 PKN2Q16513 984 aaKnown RBP15.89■□□□□ 0.13
SNX6-209ENST00000557265 ZNF296Q8WUU4 475 aaPredicted RBP15.89■□□□□ 0.13
SNX6-209ENST00000557265 MXD3Q9BW11 206 aa15.89■□□□□ 0.13
SNX6-209ENST00000557265 IFT57Q9NWB7 429 aa15.89■□□□□ 0.13
SNX6-209ENST00000557265 SCN9AQ15858 1988 aa15.89■□□□□ 0.13
SNX6-209ENST00000557265 DACT2Q5SW24 774 aa15.88■□□□□ 0.13
SNX6-209ENST00000557265 OGFOD1Q8N543 542 aa15.88■□□□□ 0.13
SNX6-209ENST00000557265 CDC5LQ99459 802 aaKnown RBP15.88■□□□□ 0.13
SNX6-209ENST00000557265 MINPP1Q9UNW1 487 aa15.88■□□□□ 0.13
SNX6-209ENST00000557265 TNRC18O15417 2968 aaPredicted RBP15.88■□□□□ 0.13
SNX6-209ENST00000557265 DDX58O95786 925 aaKnown RBP15.87■□□□□ 0.13
SNX6-209ENST00000557265 TM4SF4P48230 202 aa15.87■□□□□ 0.13
SNX6-209ENST00000557265 CTSWP56202 376 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms