RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 ZNF772Q68DY9 489 aaPredicted RBP13.7□□□□□ -0.22
NEK9-210ENST00000557026 UBA5Q9GZZ9 404 aa13.7□□□□□ -0.22
NEK9-210ENST00000557026 MCMDC2Q4G0Z9 681 aa13.7□□□□□ -0.22
NEK9-210ENST00000557026 RHPN1Q8TCX5 695 aa13.7□□□□□ -0.22
NEK9-210ENST00000557026 BICD1Q96G01 975 aa13.7□□□□□ -0.22
NEK9-210ENST00000557026 INCENPQ9NQS7 918 aa13.7□□□□□ -0.22
NEK9-210ENST00000557026 CCNL1Q9UK58 526 aaPredicted RBP13.7□□□□□ -0.22
NEK9-210ENST00000557026 RTL1A6NKG5 1358 aa13.7□□□□□ -0.22
NEK9-210ENST00000557026 NUP153P49790 1475 aaKnown RBP13.7□□□□□ -0.22
NEK9-210ENST00000557026 NFKBIBQ15653 356 aa13.7□□□□□ -0.22
NEK9-210ENST00000557026 ATL3Q6DD88 541 aa13.7□□□□□ -0.22
NEK9-210ENST00000557026 KCNG4Q8TDN1 519 aa13.7□□□□□ -0.22
NEK9-210ENST00000557026 ORC3Q9UBD5 711 aaPredicted RBP13.7□□□□□ -0.22
NEK9-210ENST00000557026 YEATS2Q9ULM3 1422 aa13.7□□□□□ -0.22
NEK9-210ENST00000557026 MTIF2P46199 727 aaKnown RBP13.69□□□□□ -0.22
NEK9-210ENST00000557026 TCIRG1Q13488 830 aa13.69□□□□□ -0.22
NEK9-210ENST00000557026 CKAP2LQ8IYA6 745 aa13.69□□□□□ -0.22
NEK9-210ENST00000557026 VTI1AQ96AJ9 217 aa13.69□□□□□ -0.22
NEK9-210ENST00000557026 BACH2Q9BYV9 841 aa13.69□□□□□ -0.22
NEK9-210ENST00000557026 MBIPQ9NS73 344 aa13.69□□□□□ -0.22
NEK9-210ENST00000557026 HAUS2Q9NVX0 235 aa13.69□□□□□ -0.22
NEK9-210ENST00000557026 EDC4Q6P2E9 1401 aaKnown RBP13.69□□□□□ -0.22
NEK9-210ENST00000557026 ERBB4Q15303 1308 aa13.69□□□□□ -0.22
NEK9-210ENST00000557026 ATP8B2P98198 1209 aa13.69□□□□□ -0.22
NEK9-210ENST00000557026 HDAC1Q13547 482 aaPredicted RBP13.69□□□□□ -0.22
NEK9-210ENST00000557026 RTN1Q16799 776 aa13.69□□□□□ -0.22
NEK9-210ENST00000557026 COPS6Q7L5N1 327 aa13.69□□□□□ -0.22
NEK9-210ENST00000557026 SPINK5Q9NQ38 1064 aaPredicted RBP13.69□□□□□ -0.22
NEK9-210ENST00000557026 EXOC1Q9NV70 894 aa13.69□□□□□ -0.22
NEK9-210ENST00000557026 SLC4A4Q9Y6R1 1079 aa13.69□□□□□ -0.22
NEK9-210ENST00000557026 BBXQ8WY36 941 aaPredicted RBP13.69□□□□□ -0.22
NEK9-210ENST00000557026 SH3TC1Q8TE82 1336 aa13.69□□□□□ -0.22
NEK9-210ENST00000557026 ZNF219Q9P2Y4 722 aaPredicted RBP13.69□□□□□ -0.22
NEK9-210ENST00000557026 MAGI2Q86UL8 1455 aa13.69□□□□□ -0.22
NEK9-210ENST00000557026 IRS4O14654 1257 aaPredicted RBP13.68□□□□□ -0.22
NEK9-210ENST00000557026 TUBB4BP68371 445 aa13.68□□□□□ -0.22
NEK9-210ENST00000557026 LZTS2Q9BRK4 669 aa13.68□□□□□ -0.22
NEK9-210ENST00000557026 DDX21Q9NR30 783 aaKnown RBP eCLIP13.68□□□□□ -0.22
NEK9-210ENST00000557026 MIS18AQ9NYP9 233 aa13.68□□□□□ -0.22
NEK9-210ENST00000557026 TOP1P11387 765 aaKnown RBP13.68□□□□□ -0.22
NEK9-210ENST00000557026 USP8P40818 1118 aa13.68□□□□□ -0.22
NEK9-210ENST00000557026 KIAA1524Q8TCG1 905 aa13.68□□□□□ -0.22
NEK9-210ENST00000557026 IVNS1ABPQ9Y6Y0 642 aa13.68□□□□□ -0.22
NEK9-210ENST00000557026 STX8Q9UNK0 236 aa13.68□□□□□ -0.22
NEK9-210ENST00000557026 CTTNBP2Q8WZ74 1663 aa13.68□□□□□ -0.22
NEK9-210ENST00000557026 NPC1L1Q9UHC9 1359 aa13.67□□□□□ -0.22
NEK9-210ENST00000557026 HACE1Q8IYU2 909 aa13.67□□□□□ -0.22
NEK9-210ENST00000557026 PLBD2Q8NHP8 589 aa13.67□□□□□ -0.22
NEK9-210ENST00000557026 GGA1Q9UJY5 639 aa13.67□□□□□ -0.22
NEK9-210ENST00000557026 BMS1Q14692 1282 aaKnown RBP13.67□□□□□ -0.22
NEK9-210ENST00000557026 STX1AQ16623 288 aa13.67□□□□□ -0.22
NEK9-210ENST00000557026 LMBR1Q8WVP7 490 aa13.67□□□□□ -0.22
NEK9-210ENST00000557026 LPXNO60711 386 aa13.66□□□□□ -0.22
NEK9-210ENST00000557026 HS2ST1Q7LGA3 356 aa13.66□□□□□ -0.22
NEK9-210ENST00000557026 RNF214Q8ND24 703 aa13.66□□□□□ -0.22
NEK9-210ENST00000557026 ERVV-2B6SEH9 535 aa13.66□□□□□ -0.22
NEK9-210ENST00000557026 KRT79Q5XKE5 535 aa13.66□□□□□ -0.22
NEK9-210ENST00000557026 AS3MTQ9HBK9 375 aa13.66□□□□□ -0.22
NEK9-210ENST00000557026 CEP83Q9Y592 693 aa13.66□□□□□ -0.22
NEK9-210ENST00000557026 PATL2C9JE40 543 aaKnown RBP13.66□□□□□ -0.22
NEK9-210ENST00000557026 KIF22Q14807 665 aa13.66□□□□□ -0.22
NEK9-210ENST00000557026 BICDL2A1A5D9 508 aa13.66□□□□□ -0.22
NEK9-210ENST00000557026 RNMTO43148 476 aaKnown RBP13.66□□□□□ -0.22
NEK9-210ENST00000557026 SMC1AQ14683 1233 aaKnown RBP13.66□□□□□ -0.22
NEK9-210ENST00000557026 DPY19L2Q6NUT2 758 aa13.66□□□□□ -0.22
NEK9-210ENST00000557026 ANKRD44Q8N8A2 993 aa13.66□□□□□ -0.22
NEK9-210ENST00000557026 TSPYL1Q9H0U9 437 aa13.66□□□□□ -0.22
NEK9-210ENST00000557026 PODXL2Q9NZ53 605 aa13.66□□□□□ -0.22
NEK9-210ENST00000557026 LUZP1Q86V48 1076 aa13.65□□□□□ -0.22
NEK9-210ENST00000557026 CDAN1Q8IWY9 1227 aa13.65□□□□□ -0.22
NEK9-210ENST00000557026 NCKAP5LQ9HCH0 1330 aa13.65□□□□□ -0.22
NEK9-210ENST00000557026 ATP5J2-PTCD1G3V325 749 aa13.65□□□□□ -0.22
NEK9-210ENST00000557026 RNF113AO15541 343 aaKnown RBP13.65□□□□□ -0.22
NEK9-210ENST00000557026 PDE8AO60658 829 aa13.65□□□□□ -0.22
NEK9-210ENST00000557026 PHACTR2O75167 634 aa13.65□□□□□ -0.22
NEK9-210ENST00000557026 OTUD7BQ6GQQ9 843 aa13.65□□□□□ -0.22
NEK9-210ENST00000557026 LMBR1LQ6UX01 489 aa13.65□□□□□ -0.22
NEK9-210ENST00000557026 PRAG1Q86YV5 1406 aa13.65□□□□□ -0.22
NEK9-210ENST00000557026 GNPATO15228 680 aa13.65□□□□□ -0.22
NEK9-210ENST00000557026 CHMP4BP1P59074 171 aa13.65□□□□□ -0.22
NEK9-210ENST00000557026 GABPB2Q8TAK5 448 aaPredicted RBP13.65□□□□□ -0.22
NEK9-210ENST00000557026 SPC25Q9HBM1 224 aa13.65□□□□□ -0.22
NEK9-210ENST00000557026 ZFYVE16Q7Z3T8 1539 aa13.65□□□□□ -0.22
NEK9-210ENST00000557026 IDEP14735 1019 aa13.65□□□□□ -0.22
NEK9-210ENST00000557026 NT5C2P49902 561 aa13.65□□□□□ -0.22
NEK9-210ENST00000557026 UVSSAQ2YD98 709 aa13.65□□□□□ -0.22
NEK9-210ENST00000557026 VEZTQ9HBM0 779 aa13.65□□□□□ -0.22
NEK9-210ENST00000557026 HELLSQ9NRZ9 838 aa13.65□□□□□ -0.22
NEK9-210ENST00000557026 NSFL1CQ9UNZ2 370 aaKnown RBP13.65□□□□□ -0.22
NEK9-210ENST00000557026 GSTTP1A0A1W2PQM5 241 aa13.64□□□□□ -0.23
NEK9-210ENST00000557026 PSMA7O14818 248 aa13.64□□□□□ -0.23
NEK9-210ENST00000557026 PRC1O43663 620 aa13.64□□□□□ -0.23
NEK9-210ENST00000557026 MYCNP04198 464 aaPredicted RBP13.64□□□□□ -0.23
NEK9-210ENST00000557026 RPL13P26373 211 aaKnown RBP13.64□□□□□ -0.23
NEK9-210ENST00000557026 PPM1FP49593 454 aaPredicted RBP13.64□□□□□ -0.23
NEK9-210ENST00000557026 SLC8A3P57103 927 aa13.64□□□□□ -0.23
NEK9-210ENST00000557026 NIM1KQ8IY84 436 aa13.64□□□□□ -0.23
NEK9-210ENST00000557026 PPM1EQ8WY54 764 aa13.64□□□□□ -0.23
NEK9-210ENST00000557026 CRACR2AQ9BSW2 395 aa13.64□□□□□ -0.23
NEK9-210ENST00000557026 GPHNQ9NQX3 736 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms