RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 C6orf229H3BNL8 230 aa28.38■■■□□ 2.13
PABPN1-206ENST00000556809 FSTL1Q12841 308 aa28.38■■■□□ 2.13
PABPN1-206ENST00000556809 RCAN3Q9UKA8 241 aa28.38■■■□□ 2.13
PABPN1-206ENST00000556809 MINPP1Q9UNW1 487 aa28.38■■■□□ 2.13
PABPN1-206ENST00000556809 NBPF7P0C2Y1 421 aaPredicted RBP28.37■■■□□ 2.13
PABPN1-206ENST00000556809 HSPA6P17066 643 aa28.37■■■□□ 2.13
PABPN1-206ENST00000556809 CXCL9Q07325 125 aa28.37■■■□□ 2.13
PABPN1-206ENST00000556809 ATF7IPQ6VMQ6 1270 aa28.37■■■□□ 2.13
PABPN1-206ENST00000556809 KAZALD1Q96I82 304 aa28.37■■■□□ 2.13
PABPN1-206ENST00000556809 ANKIB1Q9P2G1 1089 aa28.37■■■□□ 2.13
PABPN1-206ENST00000556809 YDJCA8MPS7 323 aa28.36■■■□□ 2.13
PABPN1-206ENST00000556809 TRIM27P14373 513 aa28.36■■■□□ 2.13
PABPN1-206ENST00000556809 ZKSCAN2Q63HK3 967 aa28.36■■■□□ 2.13
PABPN1-206ENST00000556809 GPR101Q96P66 508 aaPredicted RBP28.36■■■□□ 2.13
PABPN1-206ENST00000556809 TAF1DQ9H5J8 278 aaPredicted RBP28.36■■■□□ 2.13
PABPN1-206ENST00000556809 XDHP47989 1333 aa28.36■■■□□ 2.13
PABPN1-206ENST00000556809 CCT4P50991 539 aaKnown RBP28.35■■■□□ 2.13
PABPN1-206ENST00000556809 SMC1BQ8NDV3 1235 aa28.35■■■□□ 2.13
PABPN1-206ENST00000556809 EYA3Q99504 573 aa28.35■■■□□ 2.13
PABPN1-206ENST00000556809 HACL1Q9UJ83 578 aa28.35■■■□□ 2.13
PABPN1-206ENST00000556809 GGA1Q9UJY5 639 aa28.35■■■□□ 2.13
PABPN1-206ENST00000556809 GJA3Q9Y6H8 435 aa28.35■■■□□ 2.13
PABPN1-206ENST00000556809 RIMBP2O15034 1052 aa28.34■■■□□ 2.13
PABPN1-206ENST00000556809 UFL1O94874 794 aa28.34■■■□□ 2.13
PABPN1-206ENST00000556809 IGHMBP2P38935 993 aaKnown RBP28.34■■■□□ 2.13
PABPN1-206ENST00000556809 LMBR1LQ6UX01 489 aa28.34■■■□□ 2.13
PABPN1-206ENST00000556809 SUCLG2Q96I99 432 aa28.34■■■□□ 2.13
PABPN1-206ENST00000556809 ADAMTSL1Q8N6G6 1762 aa28.33■■■□□ 2.13
PABPN1-206ENST00000556809 ANKRD18BA2A2Z9 1011 aa28.33■■■□□ 2.13
PABPN1-206ENST00000556809 POTEIP0CG38 1075 aa28.33■■■□□ 2.13
PABPN1-206ENST00000556809 POTEJP0CG39 1038 aa28.33■■■□□ 2.13
PABPN1-206ENST00000556809 SCNN1DP51172 638 aa28.33■■■□□ 2.13
PABPN1-206ENST00000556809 USP44Q9H0E7 712 aa28.32■■■□□ 2.12
PABPN1-206ENST00000556809 WTIPA6NIX2 430 aaPredicted RBP28.31■■■□□ 2.12
PABPN1-206ENST00000556809 ATP2B4P23634 1241 aa28.31■■■□□ 2.12
PABPN1-206ENST00000556809 EPHX2P34913 555 aa28.31■■■□□ 2.12
PABPN1-206ENST00000556809 IFIT5Q13325 482 aaKnown RBP28.31■■■□□ 2.12
PABPN1-206ENST00000556809 CIAPIN1Q6FI81 312 aa28.31■■■□□ 2.12
PABPN1-206ENST00000556809 ZC3H12CQ9C0D7 883 aaKnown RBP28.31■■■□□ 2.12
PABPN1-206ENST00000556809 DBNDD1Q9H9R9 158 aa28.31■■■□□ 2.12
PABPN1-206ENST00000556809 TNNQ9UQP3 1299 aa28.31■■■□□ 2.12
PABPN1-206ENST00000556809 CLUAP1Q96AJ1 413 aa28.3■■■□□ 2.12
PABPN1-206ENST00000556809 SCN9AQ15858 1988 aa28.3■■■□□ 2.12
PABPN1-206ENST00000556809 A0A1B0GUL6 1792 aa28.29■■■□□ 2.12
PABPN1-206ENST00000556809 RAD17O75943 681 aa28.29■■■□□ 2.12
PABPN1-206ENST00000556809 DOK7Q18PE1 504 aa28.29■■■□□ 2.12
PABPN1-206ENST00000556809 INTS3Q68E01 1043 aaKnown RBP28.29■■■□□ 2.12
PABPN1-206ENST00000556809 MPHOSPH8Q99549 860 aa28.29■■■□□ 2.12
PABPN1-206ENST00000556809 ECE2O60344 883 aa28.28■■■□□ 2.12
PABPN1-206ENST00000556809 RABL6Q3YEC7 729 aaPredicted RBP28.28■■■□□ 2.12
PABPN1-206ENST00000556809 CHMP3Q9Y3E7 222 aa28.28■■■□□ 2.12
PABPN1-206ENST00000556809 EPS15P42566 896 aa28.27■■■□□ 2.12
PABPN1-206ENST00000556809 TNIP1Q15025 636 aa28.27■■■□□ 2.12
PABPN1-206ENST00000556809 CHADLQ6NUI6 762 aa28.27■■■□□ 2.12
PABPN1-206ENST00000556809 BICC1Q9H694 974 aaKnown RBP28.27■■■□□ 2.12
PABPN1-206ENST00000556809 KCNQ5Q9NR82 932 aa28.27■■■□□ 2.12
PABPN1-206ENST00000556809 CCDC57Q2TAC2 916 aa28.26■■■□□ 2.11
PABPN1-206ENST00000556809 PNMA8AQ86V59 439 aaPredicted RBP28.26■■■□□ 2.11
PABPN1-206ENST00000556809 LDHDQ86WU2 507 aa28.26■■■□□ 2.11
PABPN1-206ENST00000556809 ANKRD44Q8N8A2 993 aa28.26■■■□□ 2.11
PABPN1-206ENST00000556809 ANKRD2Q9GZV1 360 aa28.26■■■□□ 2.11
PABPN1-206ENST00000556809 GPRC5DQ9NZD1 345 aa28.26■■■□□ 2.11
PABPN1-206ENST00000556809 LEMD3Q9Y2U8 911 aa28.26■■■□□ 2.11
PABPN1-206ENST00000556809 PSME4Q14997 1843 aa28.26■■■□□ 2.11
PABPN1-206ENST00000556809 MED23Q9ULK4 1368 aa28.25■■■□□ 2.11
PABPN1-206ENST00000556809 LMOD1P29536 600 aaPredicted RBP28.25■■■□□ 2.11
PABPN1-206ENST00000556809 GMPSP49915 693 aaPredicted RBP28.25■■■□□ 2.11
PABPN1-206ENST00000556809 CHRNDQ07001 517 aa28.25■■■□□ 2.11
PABPN1-206ENST00000556809 FTSJ3Q8IY81 847 aaKnown RBP28.25■■■□□ 2.11
PABPN1-206ENST00000556809 DZIP1LQ8IYY4 767 aaKnown RBP28.25■■■□□ 2.11
PABPN1-206ENST00000556809 ZNF594Q96JF6 807 aaPredicted RBP28.25■■■□□ 2.11
PABPN1-206ENST00000556809 PSMD14O00487 310 aa28.24■■■□□ 2.11
PABPN1-206ENST00000556809 APLP1P51693 650 aa28.23■■■□□ 2.11
PABPN1-206ENST00000556809 EAPPQ56P03 285 aaPredicted RBP28.23■■■□□ 2.11
PABPN1-206ENST00000556809 TMEM57Q8N5G2 664 aa28.23■■■□□ 2.11
PABPN1-206ENST00000556809 ZNF804BA4D1E1 1349 aa28.22■■■□□ 2.11
PABPN1-206ENST00000556809 TXNRD3Q86VQ6 643 aa28.21■■■□□ 2.11
PABPN1-206ENST00000556809 IRS2Q9Y4H2 1338 aa28.2■■■□□ 2.11
PABPN1-206ENST00000556809 RLBP1P12271 317 aa28.2■■■□□ 2.1
PABPN1-206ENST00000556809 LDHAL6AQ6ZMR3 332 aa28.2■■■□□ 2.1
PABPN1-206ENST00000556809 USP50Q70EL3 339 aaPredicted RBP28.2■■■□□ 2.1
PABPN1-206ENST00000556809 PODNQ7Z5L7 613 aa28.2■■■□□ 2.1
PABPN1-206ENST00000556809 ZBTB12Q9Y330 459 aaPredicted RBP28.2■■■□□ 2.1
PABPN1-206ENST00000556809 ZNF646O15015 1829 aaPredicted RBP28.2■■■□□ 2.1
PABPN1-206ENST00000556809 PLIN1O60240 522 aa28.19■■■□□ 2.1
PABPN1-206ENST00000556809 TAF5LO75529 589 aa28.19■■■□□ 2.1
PABPN1-206ENST00000556809 VIL1P09327 827 aaKnown RBP28.19■■■□□ 2.1
PABPN1-206ENST00000556809 UBTFL1P0CB47 393 aaPredicted RBP28.19■■■□□ 2.1
PABPN1-206ENST00000556809 MS4A1P11836 297 aa28.19■■■□□ 2.1
PABPN1-206ENST00000556809 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.19■■■□□ 2.1
PABPN1-206ENST00000556809 DPF2Q92785 391 aa28.19■■■□□ 2.1
PABPN1-206ENST00000556809 ADARB2Q9NS39 739 aaKnown RBP28.19■■■□□ 2.1
PABPN1-206ENST00000556809 G3V3G9 751 aa28.18■■■□□ 2.1
PABPN1-206ENST00000556809 ITGBL1O95965 494 aaPredicted RBP28.18■■■□□ 2.1
PABPN1-206ENST00000556809 KLRK1P26718 216 aa28.18■■■□□ 2.1
PABPN1-206ENST00000556809 TAF7LQ5H9L4 462 aa28.18■■■□□ 2.1
PABPN1-206ENST00000556809 DCAF8Q5TAQ9 597 aa28.18■■■□□ 2.1
PABPN1-206ENST00000556809 HELBQ8NG08 1087 aaPredicted RBP28.18■■■□□ 2.1
PABPN1-206ENST00000556809 MEIS3Q99687 375 aa28.18■■■□□ 2.1
PABPN1-206ENST00000556809 CEP350Q5VT06 3117 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms