RNA–Protein interactions for RNA: ENST00000556744.1

MARK3-211, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 1,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-211ENST00000556744 SOGA3Q5TF21 947 aa12.21□□□□□ -0.45
MARK3-211ENST00000556744 C9orf131Q5VYM1 1079 aa12.21□□□□□ -0.45
MARK3-211ENST00000556744 CRAMP1Q96RY5 1269 aa12.21□□□□□ -0.45
MARK3-211ENST00000556744 DAXXQ9UER7 740 aaPredicted RBP12.21□□□□□ -0.45
MARK3-211ENST00000556744 C21orf2O43822 256 aa12.2□□□□□ -0.46
MARK3-211ENST00000556744 LMNB1P20700 586 aa12.2□□□□□ -0.46
MARK3-211ENST00000556744 EXOSC9Q06265 439 aaKnown RBP12.2□□□□□ -0.46
MARK3-211ENST00000556744 MYH16Q9H6N6 1097 aa12.2□□□□□ -0.46
MARK3-211ENST00000556744 SALL2Q9Y467 1007 aaPredicted RBP12.2□□□□□ -0.46
MARK3-211ENST00000556744 DICER1Q9UPY3 1922 aaKnown RBP12.19□□□□□ -0.46
MARK3-211ENST00000556744 SH3TC1Q8TE82 1336 aa12.19□□□□□ -0.46
MARK3-211ENST00000556744 KSR2Q6VAB6 950 aa12.19□□□□□ -0.46
MARK3-211ENST00000556744 SYNE4Q8N205 404 aa12.19□□□□□ -0.46
MARK3-211ENST00000556744 CCDC191Q8NCU4 936 aa12.19□□□□□ -0.46
MARK3-211ENST00000556744 NLRP3Q96P20 1036 aa12.19□□□□□ -0.46
MARK3-211ENST00000556744 EPAS1Q99814 870 aa12.19□□□□□ -0.46
MARK3-211ENST00000556744 METTL22Q9BUU2 404 aaPredicted RBP12.19□□□□□ -0.46
MARK3-211ENST00000556744 CACNA1SQ13698 1873 aa12.19□□□□□ -0.46
MARK3-211ENST00000556744 CCDC88AQ3V6T2 1871 aa12.19□□□□□ -0.46
MARK3-211ENST00000556744 LAMB2P55268 1798 aa12.18□□□□□ -0.46
MARK3-211ENST00000556744 TRIM66O15016 1216 aa12.18□□□□□ -0.46
MARK3-211ENST00000556744 DDX58O95786 925 aaKnown RBP12.18□□□□□ -0.46
MARK3-211ENST00000556744 MAP2K5Q13163 448 aa12.18□□□□□ -0.46
MARK3-211ENST00000556744 CC2D2BQ6DHV5 1058 aa12.18□□□□□ -0.46
MARK3-211ENST00000556744 RIC3Q7Z5B4 369 aa12.18□□□□□ -0.46
MARK3-211ENST00000556744 TRMT2AQ8IZ69 625 aaKnown RBP12.18□□□□□ -0.46
MARK3-211ENST00000556744 STK31Q9BXU1 1019 aa12.18□□□□□ -0.46
MARK3-211ENST00000556744 TRMT112Q9UI30 125 aaKnown RBP12.18□□□□□ -0.46
MARK3-211ENST00000556744 PCDHGA4Q9Y5G9 962 aa12.18□□□□□ -0.46
MARK3-211ENST00000556744 DDX60Q8IY21 1712 aaKnown RBP12.17□□□□□ -0.46
MARK3-211ENST00000556744 PI4KAP2A4QPH2 592 aa12.17□□□□□ -0.46
MARK3-211ENST00000556744 ATP5J2-PTCD1G3V325 749 aa12.17□□□□□ -0.46
MARK3-211ENST00000556744 RASSF7Q02833 373 aa12.17□□□□□ -0.46
MARK3-211ENST00000556744 SF3B3Q15393 1217 aaKnown RBP12.17□□□□□ -0.46
MARK3-211ENST00000556744 GRIPAP1Q4V328 841 aa12.17□□□□□ -0.46
MARK3-211ENST00000556744 CCDC93Q567U6 631 aa12.17□□□□□ -0.46
MARK3-211ENST00000556744 DIEXFQ68CQ4 756 aaKnown RBP12.17□□□□□ -0.46
MARK3-211ENST00000556744 G2E3Q7L622 706 aa12.17□□□□□ -0.46
MARK3-211ENST00000556744 RTKN2Q8IZC4 609 aa12.17□□□□□ -0.46
MARK3-211ENST00000556744 PI4KAP1Q8N8J0 262 aa12.17□□□□□ -0.46
MARK3-211ENST00000556744 ZBTB38Q8NAP3 1195 aaPredicted RBP12.17□□□□□ -0.46
MARK3-211ENST00000556744 RBM17Q96I25 401 aaKnown RBP12.17□□□□□ -0.46
MARK3-211ENST00000556744 RNF181Q9P0P0 153 aa12.17□□□□□ -0.46
MARK3-211ENST00000556744 E9PSI1 815 aa12.16□□□□□ -0.46
MARK3-211ENST00000556744 IGKV5-2P06315 115 aa12.16□□□□□ -0.46
MARK3-211ENST00000556744 HCLS1P14317 486 aaPredicted RBP12.16□□□□□ -0.46
MARK3-211ENST00000556744 SLFN5Q08AF3 891 aa12.16□□□□□ -0.46
MARK3-211ENST00000556744 RPGRQ92834 1020 aaKnown RBP12.16□□□□□ -0.46
MARK3-211ENST00000556744 FAM89AQ96GI7 184 aa12.16□□□□□ -0.46
MARK3-211ENST00000556744 PSMD1Q99460 953 aa12.16□□□□□ -0.46
MARK3-211ENST00000556744 TAOK3Q9H2K8 898 aa12.16□□□□□ -0.46
MARK3-211ENST00000556744 GPBP1L1Q9HC44 474 aaPredicted RBP12.16□□□□□ -0.46
MARK3-211ENST00000556744 MAP3K2Q9Y2U5 619 aa12.16□□□□□ -0.46
MARK3-211ENST00000556744 BBOX1O75936 387 aa12.15□□□□□ -0.46
MARK3-211ENST00000556744 PCCAP05165 728 aaPredicted RBP12.15□□□□□ -0.46
MARK3-211ENST00000556744 FKBP4Q02790 459 aaKnown RBP eCLIP12.15□□□□□ -0.46
MARK3-211ENST00000556744 FLIIQ13045 1269 aa12.15□□□□□ -0.46
MARK3-211ENST00000556744 ERICH6Q7L0X2 663 aa12.15□□□□□ -0.46
MARK3-211ENST00000556744 MYD88Q99836 296 aa12.15□□□□□ -0.46
MARK3-211ENST00000556744 ABCC4O15439 1325 aa12.14□□□□□ -0.47
MARK3-211ENST00000556744 TCERG1O14776 1098 aaKnown RBP12.14□□□□□ -0.47
MARK3-211ENST00000556744 PDE4DQ08499 809 aa12.14□□□□□ -0.47
MARK3-211ENST00000556744 OLFM4Q6UX06 510 aa12.14□□□□□ -0.47
MARK3-211ENST00000556744 CWC25Q9NXE8 425 aaPredicted RBP12.14□□□□□ -0.47
MARK3-211ENST00000556744 ATP6V0A2Q9Y487 856 aa12.14□□□□□ -0.47
MARK3-211ENST00000556744 CDHR2Q9BYE9 1310 aa12.13□□□□□ -0.47
MARK3-211ENST00000556744 GLTPD2A6NH11 291 aa12.13□□□□□ -0.47
MARK3-211ENST00000556744 H7C1W4 665 aa12.13□□□□□ -0.47
MARK3-211ENST00000556744 IRS4O14654 1257 aaPredicted RBP12.13□□□□□ -0.47
MARK3-211ENST00000556744 IRF6O14896 467 aa12.13□□□□□ -0.47
MARK3-211ENST00000556744 HSP90B1P14625 803 aaKnown RBP12.13□□□□□ -0.47
MARK3-211ENST00000556744 C1QTNF8P60827 252 aa12.13□□□□□ -0.47
MARK3-211ENST00000556744 PTGDRQ13258 359 aa12.13□□□□□ -0.47
MARK3-211ENST00000556744 GRAPQ13588 217 aa12.13□□□□□ -0.47
MARK3-211ENST00000556744 TMC4Q7Z404 712 aa12.13□□□□□ -0.47
MARK3-211ENST00000556744 SP8Q8IXZ3 490 aa12.13□□□□□ -0.47
MARK3-211ENST00000556744 GRAPLQ8TC17 118 aaPredicted RBP12.13□□□□□ -0.47
MARK3-211ENST00000556744 ZNF428Q96B54 188 aa12.13□□□□□ -0.47
MARK3-211ENST00000556744 RTFDC1Q9BY42 306 aaPredicted RBP12.13□□□□□ -0.47
MARK3-211ENST00000556744 TIAM2Q8IVF5 1701 aa12.12□□□□□ -0.47
MARK3-211ENST00000556744 NEURL1BA8MQ27 555 aa12.12□□□□□ -0.47
MARK3-211ENST00000556744 PPEF1O14829 653 aaPredicted RBP12.12□□□□□ -0.47
MARK3-211ENST00000556744 DOK7Q18PE1 504 aa12.12□□□□□ -0.47
MARK3-211ENST00000556744 DDX46Q7L014 1031 aaKnown RBP12.12□□□□□ -0.47
MARK3-211ENST00000556744 DNAAF4Q8WXU2 420 aa12.12□□□□□ -0.47
MARK3-211ENST00000556744 VPS33BQ9H267 617 aa12.12□□□□□ -0.47
MARK3-211ENST00000556744 KDM2BQ8NHM5 1336 aa12.11□□□□□ -0.47
MARK3-211ENST00000556744 TAF1P21675 1872 aa12.11□□□□□ -0.47
MARK3-211ENST00000556744 CASP7P55210 303 aa12.11□□□□□ -0.47
MARK3-211ENST00000556744 NEXNQ0ZGT2 675 aa12.11□□□□□ -0.47
MARK3-211ENST00000556744 TYW1BQ6NUM6 668 aa12.11□□□□□ -0.47
MARK3-211ENST00000556744 SLAIN1Q8ND83 568 aa12.11□□□□□ -0.47
MARK3-211ENST00000556744 LINS1Q8NG48 757 aa12.11□□□□□ -0.47
MARK3-211ENST00000556744 CCDC102AQ96A19 550 aa12.11□□□□□ -0.47
MARK3-211ENST00000556744 CDCA7LQ96GN5 454 aa12.11□□□□□ -0.47
MARK3-211ENST00000556744 PLA2G12BQ9BX93 195 aa12.11□□□□□ -0.47
MARK3-211ENST00000556744 NMRK2Q9NPI5 230 aa12.11□□□□□ -0.47
MARK3-211ENST00000556744 LRRC37AA6NMS7 1700 aa12.11□□□□□ -0.47
MARK3-211ENST00000556744 RTL9Q8NET4 1388 aa12.1□□□□□ -0.47
MARK3-211ENST00000556744 POTECB2RU33 542 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms