RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 MNS1Q8NEH6 495 aa20.12■□□□□ 0.81
PTPN21-208ENST00000556564 CNNM2Q9H8M5 875 aa20.12■□□□□ 0.81
PTPN21-208ENST00000556564 MRE11P49959 708 aa20.12■□□□□ 0.81
PTPN21-208ENST00000556564 DENND2AQ9ULE3 1009 aa20.12■□□□□ 0.81
PTPN21-208ENST00000556564 SBNO2Q9Y2G9 1366 aa20.11■□□□□ 0.81
PTPN21-208ENST00000556564 EIF4A1P60842 406 aaKnown RBP20.11■□□□□ 0.81
PTPN21-208ENST00000556564 FAM135BQ49AJ0 1406 aa20.11■□□□□ 0.81
PTPN21-208ENST00000556564 LARGE2Q8N3Y3 721 aa20.11■□□□□ 0.81
PTPN21-208ENST00000556564 BRF1Q92994 677 aa20.11■□□□□ 0.81
PTPN21-208ENST00000556564 CHL1O00533 1208 aa20.11■□□□□ 0.81
PTPN21-208ENST00000556564 PLCG2P16885 1265 aa20.11■□□□□ 0.81
PTPN21-208ENST00000556564 TIMM10P62072 90 aa20.11■□□□□ 0.81
PTPN21-208ENST00000556564 MPNDQ8N594 471 aa20.1■□□□□ 0.81
PTPN21-208ENST00000556564 PUM3Q15397 648 aaKnown RBP20.1■□□□□ 0.81
PTPN21-208ENST00000556564 NECAB1Q8N987 351 aa20.1■□□□□ 0.81
PTPN21-208ENST00000556564 A0A1B0GUL7 405 aa20.1■□□□□ 0.81
PTPN21-208ENST00000556564 ZBTB43O43298 467 aa20.1■□□□□ 0.81
PTPN21-208ENST00000556564 KLHL10Q6JEL2 608 aa20.1■□□□□ 0.81
PTPN21-208ENST00000556564 CHST3Q7LGC8 479 aa20.09■□□□□ 0.81
PTPN21-208ENST00000556564 MPHOSPH6Q99547 160 aaKnown RBP20.09■□□□□ 0.81
PTPN21-208ENST00000556564 ESYT1Q9BSJ8 1104 aa20.09■□□□□ 0.81
PTPN21-208ENST00000556564 PDIA4P13667 645 aaKnown RBP20.09■□□□□ 0.81
PTPN21-208ENST00000556564 CCDC173Q0VFZ6 552 aa20.09■□□□□ 0.81
PTPN21-208ENST00000556564 MAP3K4Q9Y6R4 1608 aa20.09■□□□□ 0.81
PTPN21-208ENST00000556564 CCDC178Q5BJE1 867 aa20.09■□□□□ 0.81
PTPN21-208ENST00000556564 ADCY10Q96PN6 1610 aa20.09■□□□□ 0.81
PTPN21-208ENST00000556564 TNNI2P48788 182 aa20.09■□□□□ 0.81
PTPN21-208ENST00000556564 NOM1Q5C9Z4 860 aaKnown RBP20.09■□□□□ 0.81
PTPN21-208ENST00000556564 CIZ1Q9ULV3 898 aaPredicted RBP20.09■□□□□ 0.81
PTPN21-208ENST00000556564 SUCLG2Q96I99 432 aa20.09■□□□□ 0.81
PTPN21-208ENST00000556564 GNAT2P19087 354 aa20.08■□□□□ 0.81
PTPN21-208ENST00000556564 EIF6P56537 245 aaKnown RBP20.08■□□□□ 0.81
PTPN21-208ENST00000556564 TTC41PQ6P2S7 1318 aa20.08■□□□□ 0.81
PTPN21-208ENST00000556564 EYA2O00167 538 aa20.08■□□□□ 0.81
PTPN21-208ENST00000556564 RTN1Q16799 776 aa20.08■□□□□ 0.81
PTPN21-208ENST00000556564 Q6ZUG5 572 aa20.08■□□□□ 0.81
PTPN21-208ENST00000556564 NPC1L1Q9UHC9 1359 aa20.08■□□□□ 0.81
PTPN21-208ENST00000556564 HOXB7P09629 217 aa20.08■□□□□ 0.8
PTPN21-208ENST00000556564 BCS1LQ9Y276 419 aa20.07■□□□□ 0.8
PTPN21-208ENST00000556564 MBD4O95243 580 aa20.07■□□□□ 0.8
PTPN21-208ENST00000556564 TEX11Q8IYF3 940 aa20.07■□□□□ 0.8
PTPN21-208ENST00000556564 XAGE2Q96GT9 111 aa20.07■□□□□ 0.8
PTPN21-208ENST00000556564 TET3O43151 1660 aa20.06■□□□□ 0.8
PTPN21-208ENST00000556564 CBFA2T2O43439 604 aa20.06■□□□□ 0.8
PTPN21-208ENST00000556564 TSG101Q99816 390 aa20.06■□□□□ 0.8
PTPN21-208ENST00000556564 MYOM2P54296 1465 aa20.06■□□□□ 0.8
PTPN21-208ENST00000556564 TFIP11Q9UBB9 837 aaKnown RBP20.06■□□□□ 0.8
PTPN21-208ENST00000556564 INSRP06213 1382 aa20.06■□□□□ 0.8
PTPN21-208ENST00000556564 IL17REQ8NFR9 667 aa20.06■□□□□ 0.8
PTPN21-208ENST00000556564 GPS2Q13227 327 aa20.06■□□□□ 0.8
PTPN21-208ENST00000556564 MAP3K11Q16584 847 aa20.06■□□□□ 0.8
PTPN21-208ENST00000556564 VTI1AQ96AJ9 217 aa20.06■□□□□ 0.8
PTPN21-208ENST00000556564 PPP1R12BO60237 982 aaPredicted RBP20.06■□□□□ 0.8
PTPN21-208ENST00000556564 EIF5P55010 431 aaKnown RBP20.06■□□□□ 0.8
PTPN21-208ENST00000556564 PPP4R3BQ5MIZ7 849 aa20.06■□□□□ 0.8
PTPN21-208ENST00000556564 PANK2Q9BZ23 570 aa20.06■□□□□ 0.8
PTPN21-208ENST00000556564 TNNI3KQ59H18 835 aa20.05■□□□□ 0.8
PTPN21-208ENST00000556564 CALML4Q96GE6 196 aa20.05■□□□□ 0.8
PTPN21-208ENST00000556564 FPGT-TNNI3KV9GXZ4 949 aa20.05■□□□□ 0.8
PTPN21-208ENST00000556564 PRC1O43663 620 aa20.05■□□□□ 0.8
PTPN21-208ENST00000556564 RAB3GAP1Q15042 981 aa20.05■□□□□ 0.8
PTPN21-208ENST00000556564 CARD10Q9BWT7 1032 aa20.05■□□□□ 0.8
PTPN21-208ENST00000556564 DCTPP1Q9H773 170 aa20.05■□□□□ 0.8
PTPN21-208ENST00000556564 ZBTB40Q9NUA8 1239 aa20.05■□□□□ 0.8
PTPN21-208ENST00000556564 KRT27Q7Z3Y8 459 aa20.05■□□□□ 0.8
PTPN21-208ENST00000556564 RIMBP3CA6NJZ7 1639 aa20.05■□□□□ 0.8
PTPN21-208ENST00000556564 RIMBP3BA6NNM3 1639 aa20.05■□□□□ 0.8
PTPN21-208ENST00000556564 RIMBP3Q9UFD9 1639 aa20.05■□□□□ 0.8
PTPN21-208ENST00000556564 GPR162Q16538 588 aa20.04■□□□□ 0.8
PTPN21-208ENST00000556564 KCNQ4P56696 695 aa20.04■□□□□ 0.8
PTPN21-208ENST00000556564 PRKG1Q13976 671 aa20.04■□□□□ 0.8
PTPN21-208ENST00000556564 USP6P35125 1406 aa20.04■□□□□ 0.8
PTPN21-208ENST00000556564 SSFA2P28290 1259 aa20.04■□□□□ 0.8
PTPN21-208ENST00000556564 GCKRQ14397 625 aa20.04■□□□□ 0.8
PTPN21-208ENST00000556564 TCP11L1Q9NUJ3 509 aa20.04■□□□□ 0.8
PTPN21-208ENST00000556564 BRINP3Q76B58 766 aa20.04■□□□□ 0.8
PTPN21-208ENST00000556564 CNNM3Q8NE01 707 aa20.04■□□□□ 0.8
PTPN21-208ENST00000556564 SCAND2PQ9GZW5 306 aaPredicted RBP20.04■□□□□ 0.8
PTPN21-208ENST00000556564 SMTNL1A8MU46 457 aa20.03■□□□□ 0.8
PTPN21-208ENST00000556564 ALDH1B1P30837 517 aa20.03■□□□□ 0.8
PTPN21-208ENST00000556564 PDE6BP35913 854 aa20.03■□□□□ 0.8
PTPN21-208ENST00000556564 NAPAP54920 295 aa20.03■□□□□ 0.8
PTPN21-208ENST00000556564 TMTC2Q8N394 836 aa20.03■□□□□ 0.8
PTPN21-208ENST00000556564 ZKSCAN3Q9BRR0 538 aa20.03■□□□□ 0.8
PTPN21-208ENST00000556564 ASAP1Q9ULH1 1129 aa20.03■□□□□ 0.8
PTPN21-208ENST00000556564 ARHGEF25Q86VW2 580 aa20.03■□□□□ 0.8
PTPN21-208ENST00000556564 ARMT1Q9H993 441 aa20.03■□□□□ 0.8
PTPN21-208ENST00000556564 RUFY1Q96T51 708 aa20.03■□□□□ 0.8
PTPN21-208ENST00000556564 TTLL7Q6ZT98 887 aa20.03■□□□□ 0.8
PTPN21-208ENST00000556564 SMARCC2Q8TAQ2 1214 aa20.03■□□□□ 0.8
PTPN21-208ENST00000556564 ALG1Q9BT22 464 aa20.03■□□□□ 0.8
PTPN21-208ENST00000556564 CKAP2LQ8IYA6 745 aa20.03■□□□□ 0.8
PTPN21-208ENST00000556564 NIM1KQ8IY84 436 aa20.02■□□□□ 0.8
PTPN21-208ENST00000556564 PRR36Q9H6K5 1346 aa20.02■□□□□ 0.8
PTPN21-208ENST00000556564 LOC102724428A0A0B4J2F2 783 aa20.02■□□□□ 0.8
PTPN21-208ENST00000556564 SYCE3A1L190 88 aa20.02■□□□□ 0.8
PTPN21-208ENST00000556564 ZBTB7BO15156 539 aaPredicted RBP20.02■□□□□ 0.8
PTPN21-208ENST00000556564 SIK1P57059 783 aa20.02■□□□□ 0.8
PTPN21-208ENST00000556564 SUPT20HQ8NEM7 779 aa20.02■□□□□ 0.8
PTPN21-208ENST00000556564 TBC1D2Q9BYX2 928 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms