RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 KIF1BPQ96EK5 621 aa13.95□□□□□ -0.18
FOXN3-212ENST00000556541 PIM2Q9P1W9 311 aa13.95□□□□□ -0.18
FOXN3-212ENST00000556541 ATP6V0A2Q9Y487 856 aa13.95□□□□□ -0.18
FOXN3-212ENST00000556541 FER1L6Q2WGJ9 1857 aa13.95□□□□□ -0.18
FOXN3-212ENST00000556541 SURF6O75683 361 aaKnown RBP13.94□□□□□ -0.18
FOXN3-212ENST00000556541 IGHDP01880 384 aa13.94□□□□□ -0.18
FOXN3-212ENST00000556541 CHRNA5P30532 468 aa13.94□□□□□ -0.18
FOXN3-212ENST00000556541 VGLL2Q8N8G2 317 aa13.94□□□□□ -0.18
FOXN3-212ENST00000556541 C7orf43Q8WVR3 580 aa13.94□□□□□ -0.18
FOXN3-212ENST00000556541 CCDC136Q96JN2 1154 aa13.94□□□□□ -0.18
FOXN3-212ENST00000556541 ANKRD2Q9GZV1 360 aa13.94□□□□□ -0.18
FOXN3-212ENST00000556541 PODXL2Q9NZ53 605 aa13.94□□□□□ -0.18
FOXN3-212ENST00000556541 PPEF1O14829 653 aaPredicted RBP13.93□□□□□ -0.18
FOXN3-212ENST00000556541 PRPF40BQ6NWY9 871 aaKnown RBP13.93□□□□□ -0.18
FOXN3-212ENST00000556541 ZNF622Q969S3 477 aaKnown RBP eCLIP13.93□□□□□ -0.18
FOXN3-212ENST00000556541 ZNF594Q96JF6 807 aaPredicted RBP13.93□□□□□ -0.18
FOXN3-212ENST00000556541 CCDC85AQ96PX6 553 aaPredicted RBP13.93□□□□□ -0.18
FOXN3-212ENST00000556541 FHDC1Q9C0D6 1143 aaPredicted RBP13.93□□□□□ -0.18
FOXN3-212ENST00000556541 CNNM1Q9NRU3 951 aa13.93□□□□□ -0.18
FOXN3-212ENST00000556541 PPP1R1BQ9UD71 204 aaPredicted RBP13.93□□□□□ -0.18
FOXN3-212ENST00000556541 MINPP1Q9UNW1 487 aa13.93□□□□□ -0.18
FOXN3-212ENST00000556541 PA2G4Q9UQ80 394 aaKnown RBP13.93□□□□□ -0.18
FOXN3-212ENST00000556541 SASH1O94885 1247 aa13.92□□□□□ -0.18
FOXN3-212ENST00000556541 C15orf52Q6ZUT6 534 aaKnown RBP13.92□□□□□ -0.18
FOXN3-212ENST00000556541 SYT17Q9BSW7 474 aa13.92□□□□□ -0.18
FOXN3-212ENST00000556541 AKAP2Q9Y2D5 859 aa13.92□□□□□ -0.18
FOXN3-212ENST00000556541 DUOX1Q9NRD9 1551 aa13.92□□□□□ -0.18
FOXN3-212ENST00000556541 XDHP47989 1333 aa13.91□□□□□ -0.18
FOXN3-212ENST00000556541 ZNF609O15014 1411 aa13.91□□□□□ -0.18
FOXN3-212ENST00000556541 A0A0G2JLW4 131 aa13.91□□□□□ -0.18
FOXN3-212ENST00000556541 PDE8BO95263 885 aa13.91□□□□□ -0.18
FOXN3-212ENST00000556541 CHRNDQ07001 517 aa13.91□□□□□ -0.18
FOXN3-212ENST00000556541 UBE4AQ14139 1066 aa13.91□□□□□ -0.18
FOXN3-212ENST00000556541 LRRC24Q50LG9 513 aa13.91□□□□□ -0.18
FOXN3-212ENST00000556541 DALRD3Q5D0E6 543 aaKnown RBP13.91□□□□□ -0.18
FOXN3-212ENST00000556541 KLHDC4Q8TBB5 520 aa13.91□□□□□ -0.18
FOXN3-212ENST00000556541 RHPN1Q8TCX5 695 aa13.91□□□□□ -0.18
FOXN3-212ENST00000556541 RTFDC1Q9BY42 306 aaPredicted RBP13.91□□□□□ -0.18
FOXN3-212ENST00000556541 PUS3Q9BZE2 481 aaKnown RBP13.91□□□□□ -0.18
FOXN3-212ENST00000556541 LRRCC1Q9C099 1032 aa13.91□□□□□ -0.18
FOXN3-212ENST00000556541 TMX4Q9H1E5 349 aaPredicted RBP13.91□□□□□ -0.18
FOXN3-212ENST00000556541 VPS33BQ9H267 617 aa13.91□□□□□ -0.18
FOXN3-212ENST00000556541 CEP126Q9P2H0 1117 aa13.91□□□□□ -0.18
FOXN3-212ENST00000556541 EXOC6BQ9Y2D4 811 aa13.91□□□□□ -0.18
FOXN3-212ENST00000556541 LEMD3Q9Y2U8 911 aa13.91□□□□□ -0.18
FOXN3-212ENST00000556541 FGFR2P21802 821 aa13.9□□□□□ -0.18
FOXN3-212ENST00000556541 NUCB1Q02818 461 aa13.9□□□□□ -0.18
FOXN3-212ENST00000556541 RTKN2Q8IZC4 609 aa13.9□□□□□ -0.18
FOXN3-212ENST00000556541 LTBP3Q9NS15 1303 aa13.9□□□□□ -0.19
FOXN3-212ENST00000556541 ATP2B4P23634 1241 aa13.89□□□□□ -0.19
FOXN3-212ENST00000556541 OS9Q13438 667 aaPredicted RBP13.89□□□□□ -0.19
FOXN3-212ENST00000556541 PUM3Q15397 648 aaKnown RBP13.89□□□□□ -0.19
FOXN3-212ENST00000556541 CCDC93Q567U6 631 aa13.89□□□□□ -0.19
FOXN3-212ENST00000556541 METTL24Q5JXM2 366 aa13.89□□□□□ -0.19
FOXN3-212ENST00000556541 NLGN2Q8NFZ4 835 aa13.89□□□□□ -0.19
FOXN3-212ENST00000556541 PSMD1Q99460 953 aa13.89□□□□□ -0.19
FOXN3-212ENST00000556541 SIL1Q9H173 461 aa13.89□□□□□ -0.19
FOXN3-212ENST00000556541 GTF3C3Q9Y5Q9 886 aa13.89□□□□□ -0.19
FOXN3-212ENST00000556541 UTRNP46939 3433 aa13.89□□□□□ -0.19
FOXN3-212ENST00000556541 CLASRPQ8N2M8 674 aaKnown RBP13.88□□□□□ -0.19
FOXN3-212ENST00000556541 SUPT20HQ8NEM7 779 aa13.88□□□□□ -0.19
FOXN3-212ENST00000556541 LPIN2Q92539 896 aa13.88□□□□□ -0.19
FOXN3-212ENST00000556541 DICER1Q9UPY3 1922 aaKnown RBP13.88□□□□□ -0.19
FOXN3-212ENST00000556541 IRS2Q9Y4H2 1338 aa13.88□□□□□ -0.19
FOXN3-212ENST00000556541 MED23Q9ULK4 1368 aa13.87□□□□□ -0.19
FOXN3-212ENST00000556541 TFCP2Q12800 502 aa13.87□□□□□ -0.19
FOXN3-212ENST00000556541 TNNI3KQ59H18 835 aa13.87□□□□□ -0.19
FOXN3-212ENST00000556541 IFFO2Q5TF58 517 aa13.87□□□□□ -0.19
FOXN3-212ENST00000556541 CHD1LQ86WJ1 897 aa13.87□□□□□ -0.19
FOXN3-212ENST00000556541 MPNDQ8N594 471 aa13.87□□□□□ -0.19
FOXN3-212ENST00000556541 FPGT-TNNI3KV9GXZ4 949 aa13.87□□□□□ -0.19
FOXN3-212ENST00000556541 PSME4Q14997 1843 aa13.86□□□□□ -0.19
FOXN3-212ENST00000556541 GPSM2P81274 684 aa13.86□□□□□ -0.19
FOXN3-212ENST00000556541 ATP2B3Q16720 1220 aa13.86□□□□□ -0.19
FOXN3-212ENST00000556541 B4GALNT3Q6L9W6 998 aa13.86□□□□□ -0.19
FOXN3-212ENST00000556541 ZNF512BQ96KM6 892 aaPredicted RBP13.86□□□□□ -0.19
FOXN3-212ENST00000556541 ZBTB47Q9UFB7 747 aaPredicted RBP13.86□□□□□ -0.19
FOXN3-212ENST00000556541 GGA1Q9UJY5 639 aa13.86□□□□□ -0.19
FOXN3-212ENST00000556541 ZNF804BA4D1E1 1349 aa13.86□□□□□ -0.19
FOXN3-212ENST00000556541 SALL3Q9BXA9 1300 aa13.86□□□□□ -0.19
FOXN3-212ENST00000556541 MYH13Q9UKX3 1938 aa13.86□□□□□ -0.19
FOXN3-212ENST00000556541 IFIT1P09914 478 aaKnown RBP13.85□□□□□ -0.19
FOXN3-212ENST00000556541 SLC5A1P13866 664 aa13.85□□□□□ -0.19
FOXN3-212ENST00000556541 ANKRD45Q5TZF3 282 aa13.85□□□□□ -0.19
FOXN3-212ENST00000556541 DPP8Q6V1X1 898 aaPredicted RBP13.85□□□□□ -0.19
FOXN3-212ENST00000556541 KLHL34Q8N239 644 aa13.85□□□□□ -0.19
FOXN3-212ENST00000556541 TBC1D16Q8TBP0 767 aa13.85□□□□□ -0.19
FOXN3-212ENST00000556541 EYA3Q99504 573 aa13.85□□□□□ -0.19
FOXN3-212ENST00000556541 ANKIB1Q9P2G1 1089 aa13.85□□□□□ -0.19
FOXN3-212ENST00000556541 AOX1Q06278 1338 aa13.85□□□□□ -0.19
FOXN3-212ENST00000556541 SBF1O95248 1867 aa13.84□□□□□ -0.19
FOXN3-212ENST00000556541 A0A1B0GUL7 405 aa13.84□□□□□ -0.19
FOXN3-212ENST00000556541 C21orf2O43822 256 aa13.84□□□□□ -0.19
FOXN3-212ENST00000556541 FKBP4Q02790 459 aaKnown RBP eCLIP13.84□□□□□ -0.19
FOXN3-212ENST00000556541 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.84□□□□□ -0.19
FOXN3-212ENST00000556541 EAF2Q96CJ1 260 aaPredicted RBP13.84□□□□□ -0.19
FOXN3-212ENST00000556541 OSBPL3Q9H4L5 887 aa13.84□□□□□ -0.19
FOXN3-212ENST00000556541 STAP2Q9UGK3 403 aa13.84□□□□□ -0.19
FOXN3-212ENST00000556541 NSFL1CQ9UNZ2 370 aaKnown RBP13.84□□□□□ -0.19
FOXN3-212ENST00000556541 PDS5AQ29RF7 1337 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms