RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 RAD17O75943 681 aa16.06■□□□□ 0.16
SNX6-207ENST00000556303 ATP2B4P23634 1241 aa16.06■□□□□ 0.16
SNX6-207ENST00000556303 RPS12P25398 132 aaKnown RBP16.06■□□□□ 0.16
SNX6-207ENST00000556303 GMPSP49915 693 aaPredicted RBP16.06■□□□□ 0.16
SNX6-207ENST00000556303 MAP1SQ66K74 1059 aaPredicted RBP16.06■□□□□ 0.16
SNX6-207ENST00000556303 JARID2Q92833 1246 aaPredicted RBP16.06■□□□□ 0.16
SNX6-207ENST00000556303 PGAP2Q9UHJ9 254 aa16.06■□□□□ 0.16
SNX6-207ENST00000556303 H7C1D1 291 aa16.05■□□□□ 0.16
SNX6-207ENST00000556303 CSF1RP07333 972 aa16.05■□□□□ 0.16
SNX6-207ENST00000556303 CASP7P55210 303 aa16.05■□□□□ 0.16
SNX6-207ENST00000556303 UBE3BQ7Z3V4 1068 aa16.05■□□□□ 0.16
SNX6-207ENST00000556303 MYH3P11055 1940 aa16.05■□□□□ 0.16
SNX6-207ENST00000556303 LTBP1Q14766 1721 aa16.05■□□□□ 0.16
SNX6-207ENST00000556303 E9PSI1 815 aa16.04■□□□□ 0.16
SNX6-207ENST00000556303 RIMBP2O15034 1052 aa16.04■□□□□ 0.16
SNX6-207ENST00000556303 ECE2O60344 883 aa16.04■□□□□ 0.16
SNX6-207ENST00000556303 UFL1O94874 794 aa16.04■□□□□ 0.16
SNX6-207ENST00000556303 GREM2Q9H772 168 aa16.04■□□□□ 0.16
SNX6-207ENST00000556303 DBNDD1Q9H9R9 158 aa16.04■□□□□ 0.16
SNX6-207ENST00000556303 CNOT7Q9UIV1 285 aaKnown RBP16.04■□□□□ 0.16
SNX6-207ENST00000556303 CNTNAP1P78357 1384 aa16.03■□□□□ 0.16
SNX6-207ENST00000556303 CCER2I3L3R5 266 aa16.03■□□□□ 0.16
SNX6-207ENST00000556303 PSMD14O00487 310 aa16.03■□□□□ 0.16
SNX6-207ENST00000556303 IGHMBP2P38935 993 aaKnown RBP16.03■□□□□ 0.16
SNX6-207ENST00000556303 BEND3Q5T5X7 828 aa16.03■□□□□ 0.16
SNX6-207ENST00000556303 CCDC85AQ96PX6 553 aaPredicted RBP16.03■□□□□ 0.16
SNX6-207ENST00000556303 G3V3G9 751 aa16.02■□□□□ 0.16
SNX6-207ENST00000556303 VIL1P09327 827 aaKnown RBP16.02■□□□□ 0.16
SNX6-207ENST00000556303 DCAF8Q5TAQ9 597 aa16.02■□□□□ 0.16
SNX6-207ENST00000556303 PODNQ7Z5L7 613 aa16.02■□□□□ 0.16
SNX6-207ENST00000556303 MINPP1Q9UNW1 487 aa16.02■□□□□ 0.16
SNX6-207ENST00000556303 COL4A1P02462 1669 aa16.02■□□□□ 0.15
SNX6-207ENST00000556303 RASSF10A6NK89 507 aa16.01■□□□□ 0.15
SNX6-207ENST00000556303 ALDH1L1O75891 902 aa16.01■□□□□ 0.15
SNX6-207ENST00000556303 ITGA6P23229 1130 aa16.01■□□□□ 0.15
SNX6-207ENST00000556303 MPHOSPH8Q99549 860 aa16.01■□□□□ 0.15
SNX6-207ENST00000556303 ANKRD2Q9GZV1 360 aa16.01■□□□□ 0.15
SNX6-207ENST00000556303 LEMD3Q9Y2U8 911 aa16.01■□□□□ 0.15
SNX6-207ENST00000556303 DOK7Q18PE1 504 aa16■□□□□ 0.15
SNX6-207ENST00000556303 MICALL2Q8IY33 904 aa16■□□□□ 0.15
SNX6-207ENST00000556303 AGBL3Q8NEM8 1001 aa16■□□□□ 0.15
SNX6-207ENST00000556303 ZNF609O15014 1411 aa16■□□□□ 0.15
SNX6-207ENST00000556303 ANKRD18BA2A2Z9 1011 aa15.99■□□□□ 0.15
SNX6-207ENST00000556303 F6X3S4 739 aa15.99■□□□□ 0.15
SNX6-207ENST00000556303 MMP14P50281 582 aa15.99■□□□□ 0.15
SNX6-207ENST00000556303 CCT4P50991 539 aaKnown RBP15.99■□□□□ 0.15
SNX6-207ENST00000556303 DEFB115Q30KQ5 88 aa15.99■□□□□ 0.15
SNX6-207ENST00000556303 CDC37L1Q7L3B6 337 aa15.99■□□□□ 0.15
SNX6-207ENST00000556303 MKRN1Q9UHC7 482 aaKnown RBP15.99■□□□□ 0.15
SNX6-207ENST00000556303 ZBTB12Q9Y330 459 aaPredicted RBP15.99■□□□□ 0.15
SNX6-207ENST00000556303 MED23Q9ULK4 1368 aa15.99■□□□□ 0.15
SNX6-207ENST00000556303 PTPRCP08575 1304 aa15.98■□□□□ 0.15
SNX6-207ENST00000556303 GRM8O00222 908 aa15.98■□□□□ 0.15
SNX6-207ENST00000556303 HIRAP54198 1017 aaPredicted RBP15.98■□□□□ 0.15
SNX6-207ENST00000556303 SLFN5Q08AF3 891 aa15.98■□□□□ 0.15
SNX6-207ENST00000556303 SRCIN1Q9C0H9 1055 aa15.98■□□□□ 0.15
SNX6-207ENST00000556303 CT47B1P0C2W7 299 aaPredicted RBP15.97■□□□□ 0.15
SNX6-207ENST00000556303 IFIT5Q13325 482 aaKnown RBP15.97■□□□□ 0.15
SNX6-207ENST00000556303 FAM161AQ3B820 660 aa15.97■□□□□ 0.15
SNX6-207ENST00000556303 IFFO2Q5TF58 517 aa15.97■□□□□ 0.15
SNX6-207ENST00000556303 RSBN1LQ6PCB5 846 aaPredicted RBP15.97■□□□□ 0.15
SNX6-207ENST00000556303 TRPM4Q8TD43 1214 aa15.97■□□□□ 0.15
SNX6-207ENST00000556303 GPR101Q96P66 508 aaPredicted RBP15.97■□□□□ 0.15
SNX6-207ENST00000556303 COA1Q9GZY4 146 aa15.97■□□□□ 0.15
SNX6-207ENST00000556303 KCNQ5Q9NR82 932 aa15.97■□□□□ 0.15
SNX6-207ENST00000556303 C9orf78Q9NZ63 289 aaPredicted RBP15.97■□□□□ 0.15
SNX6-207ENST00000556303 USP17L3A6NCW0 530 aa15.96■□□□□ 0.15
SNX6-207ENST00000556303 USP17L4A6NCW7 530 aa15.96■□□□□ 0.15
SNX6-207ENST00000556303 HSPA1AP0DMV8 641 aaKnown RBP15.96■□□□□ 0.15
SNX6-207ENST00000556303 HSPA1BP0DMV9 641 aaKnown RBP15.96■□□□□ 0.15
SNX6-207ENST00000556303 VEGFBP49765 207 aa15.96■□□□□ 0.15
SNX6-207ENST00000556303 ZNF280AP59817 542 aaPredicted RBP15.96■□□□□ 0.15
SNX6-207ENST00000556303 FOXO4P98177 505 aa15.96■□□□□ 0.15
SNX6-207ENST00000556303 ALDH1L2Q3SY69 923 aa15.96■□□□□ 0.15
SNX6-207ENST00000556303 CST9Q5W186 159 aa15.96■□□□□ 0.15
SNX6-207ENST00000556303 USP17L1Q7RTZ2 530 aa15.96■□□□□ 0.15
SNX6-207ENST00000556303 MRPL50Q8N5N7 158 aaKnown RBP15.96■□□□□ 0.15
SNX6-207ENST00000556303 HHIPL1Q96JK4 782 aa15.96■□□□□ 0.15
SNX6-207ENST00000556303 ABT1Q9ULW3 272 aaKnown RBP15.96■□□□□ 0.15
SNX6-207ENST00000556303 TRPM7Q96QT4 1865 aa15.96■□□□□ 0.15
SNX6-207ENST00000556303 ECE1P42892 770 aa15.95■□□□□ 0.14
SNX6-207ENST00000556303 SAMD7Q7Z3H4 446 aa15.95■□□□□ 0.14
SNX6-207ENST00000556303 TRMT2AQ8IZ69 625 aaKnown RBP15.95■□□□□ 0.14
SNX6-207ENST00000556303 TLL2Q9Y6L7 1015 aa15.95■□□□□ 0.14
SNX6-207ENST00000556303 SCN9AQ15858 1988 aa15.95■□□□□ 0.14
SNX6-207ENST00000556303 ZNF804BA4D1E1 1349 aa15.94■□□□□ 0.14
SNX6-207ENST00000556303 UTYO14607 1347 aa15.94■□□□□ 0.14
SNX6-207ENST00000556303 MYO3BQ8WXR4 1341 aa15.94■□□□□ 0.14
SNX6-207ENST00000556303 CCDC57Q2TAC2 916 aa15.94■□□□□ 0.14
SNX6-207ENST00000556303 STRIP1Q5VSL9 837 aa15.94■□□□□ 0.14
SNX6-207ENST00000556303 SLC4A10Q6U841 1118 aa15.94■□□□□ 0.14
SNX6-207ENST00000556303 C15orf52Q6ZUT6 534 aaKnown RBP15.94■□□□□ 0.14
SNX6-207ENST00000556303 GMLQ99445 158 aa15.94■□□□□ 0.14
SNX6-207ENST00000556303 WDR33Q9C0J8 1336 aaKnown RBP15.94■□□□□ 0.14
SNX6-207ENST00000556303 SHTN1A0MZ66 631 aa15.93■□□□□ 0.14
SNX6-207ENST00000556303 TRAF5O00463 557 aa15.93■□□□□ 0.14
SNX6-207ENST00000556303 CELF2O95319 508 aaKnown RBP15.93■□□□□ 0.14
SNX6-207ENST00000556303 CHRNDQ07001 517 aa15.93■□□□□ 0.14
SNX6-207ENST00000556303 KIF4BQ2VIQ3 1234 aa15.93■□□□□ 0.14
SNX6-207ENST00000556303 TBC1D10BQ4KMP7 808 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms