RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 TAOK3Q9H2K8 898 aa17.62■□□□□ 0.41
SNX6-206ENST00000556162 NFKBIEO00221 500 aa17.61■□□□□ 0.41
SNX6-206ENST00000556162 GPSM2P81274 684 aa17.61■□□□□ 0.41
SNX6-206ENST00000556162 FKBP4Q02790 459 aaKnown RBP eCLIP17.61■□□□□ 0.41
SNX6-206ENST00000556162 SSH3Q8TE77 659 aa17.61■□□□□ 0.41
SNX6-206ENST00000556162 PSMD1Q99460 953 aa17.61■□□□□ 0.41
SNX6-206ENST00000556162 PUS3Q9BZE2 481 aaKnown RBP17.61■□□□□ 0.41
SNX6-206ENST00000556162 ANKRD2Q9GZV1 360 aa17.61■□□□□ 0.41
SNX6-206ENST00000556162 COPRSQ9NQ92 184 aa17.61■□□□□ 0.41
SNX6-206ENST00000556162 CHRNDQ07001 517 aa17.6■□□□□ 0.41
SNX6-206ENST00000556162 PODXL2Q9NZ53 605 aa17.6■□□□□ 0.41
SNX6-206ENST00000556162 FBXO3Q9UK99 471 aa17.6■□□□□ 0.41
SNX6-206ENST00000556162 XDHP47989 1333 aa17.6■□□□□ 0.41
SNX6-206ENST00000556162 EYA2O00167 538 aa17.59■□□□□ 0.41
SNX6-206ENST00000556162 IRX6P78412 446 aaPredicted RBP17.59■□□□□ 0.41
SNX6-206ENST00000556162 AAMPQ13685 434 aa17.59■□□□□ 0.41
SNX6-206ENST00000556162 POLA2Q14181 598 aa17.59■□□□□ 0.41
SNX6-206ENST00000556162 LRRC24Q50LG9 513 aa17.59■□□□□ 0.41
SNX6-206ENST00000556162 SUPT20HQ8NEM7 779 aa17.59■□□□□ 0.41
SNX6-206ENST00000556162 SIL1Q9H173 461 aa17.59■□□□□ 0.41
SNX6-206ENST00000556162 PA2G4Q9UQ80 394 aaKnown RBP17.59■□□□□ 0.41
SNX6-206ENST00000556162 RIPOR2Q9Y4F9 1068 aa17.59■□□□□ 0.41
SNX6-206ENST00000556162 LTBP3Q9NS15 1303 aa17.59■□□□□ 0.41
SNX6-206ENST00000556162 HMMRO75330 724 aa17.58■□□□□ 0.41
SNX6-206ENST00000556162 RASSF7Q02833 373 aa17.58■□□□□ 0.41
SNX6-206ENST00000556162 EXOC6Q8TAG9 804 aa17.58■□□□□ 0.41
SNX6-206ENST00000556162 GGA1Q9UJY5 639 aa17.58■□□□□ 0.41
SNX6-206ENST00000556162 MROH5Q6ZUA9 1318 aa17.58■□□□□ 0.41
SNX6-206ENST00000556162 C6orf229H3BNL8 230 aa17.58■□□□□ 0.4
SNX6-206ENST00000556162 RTFDC1Q9BY42 306 aaPredicted RBP17.58■□□□□ 0.4
SNX6-206ENST00000556162 CIAO1O76071 339 aa17.57■□□□□ 0.4
SNX6-206ENST00000556162 ATP2B4P23634 1241 aa17.57■□□□□ 0.4
SNX6-206ENST00000556162 METTL24Q5JXM2 366 aa17.57■□□□□ 0.4
SNX6-206ENST00000556162 HELBQ8NG08 1087 aaPredicted RBP17.57■□□□□ 0.4
SNX6-206ENST00000556162 TBC1D16Q8TBP0 767 aa17.57■□□□□ 0.4
SNX6-206ENST00000556162 SNED1Q8TER0 1413 aa17.57■□□□□ 0.4
SNX6-206ENST00000556162 POLLQ9UGP5 575 aa17.57■□□□□ 0.4
SNX6-206ENST00000556162 TAF5LO75529 589 aa17.56■□□□□ 0.4
SNX6-206ENST00000556162 UFL1O94874 794 aa17.56■□□□□ 0.4
SNX6-206ENST00000556162 LMNB1P20700 586 aa17.56■□□□□ 0.4
SNX6-206ENST00000556162 IL15P40933 162 aaPredicted RBP17.56■□□□□ 0.4
SNX6-206ENST00000556162 G3BP1Q13283 466 aaKnown RBP eCLIP17.56■□□□□ 0.4
SNX6-206ENST00000556162 ZNF277Q9NRM2 450 aaPredicted RBP17.56■□□□□ 0.4
SNX6-206ENST00000556162 LEMD3Q9Y2U8 911 aa17.56■□□□□ 0.4
SNX6-206ENST00000556162 SURF6O75683 361 aaKnown RBP17.56■□□□□ 0.4
SNX6-206ENST00000556162 KCNJ4P48050 445 aa17.56■□□□□ 0.4
SNX6-206ENST00000556162 ATG9AQ7Z3C6 839 aa17.56■□□□□ 0.4
SNX6-206ENST00000556162 SIRT2Q8IXJ6 389 aa17.56■□□□□ 0.4
SNX6-206ENST00000556162 EYA3Q99504 573 aa17.56■□□□□ 0.4
SNX6-206ENST00000556162 VPS33BQ9H267 617 aa17.56■□□□□ 0.4
SNX6-206ENST00000556162 LRRC37AA6NMS7 1700 aa17.56■□□□□ 0.4
SNX6-206ENST00000556162 FER1L6Q2WGJ9 1857 aa17.55■□□□□ 0.4
SNX6-206ENST00000556162 SPEF2Q9C093 1822 aa17.55■□□□□ 0.4
SNX6-206ENST00000556162 IARSP41252 1262 aaKnown RBP17.54■□□□□ 0.4
SNX6-206ENST00000556162 WASHC4Q2M389 1173 aa17.54■□□□□ 0.4
SNX6-206ENST00000556162 CEP126Q9P2H0 1117 aa17.54■□□□□ 0.4
SNX6-206ENST00000556162 PCDHB15Q9Y5E8 787 aa17.54■□□□□ 0.4
SNX6-206ENST00000556162 ZNF804BA4D1E1 1349 aa17.54■□□□□ 0.4
SNX6-206ENST00000556162 PPIP5K2O43314 1243 aa17.54■□□□□ 0.4
SNX6-206ENST00000556162 PDE8BO95263 885 aa17.54■□□□□ 0.4
SNX6-206ENST00000556162 OS9Q13438 667 aaPredicted RBP17.54■□□□□ 0.4
SNX6-206ENST00000556162 C9orf131Q5VYM1 1079 aa17.54■□□□□ 0.4
SNX6-206ENST00000556162 ZC3H12CQ9C0D7 883 aaKnown RBP17.54■□□□□ 0.4
SNX6-206ENST00000556162 RNF181Q9P0P0 153 aa17.54■□□□□ 0.4
SNX6-206ENST00000556162 NOP58Q9Y2X3 529 aaKnown RBP17.54■□□□□ 0.4
SNX6-206ENST00000556162 PRELPP51888 382 aa17.53■□□□□ 0.4
SNX6-206ENST00000556162 LARGE2Q8N3Y3 721 aa17.53■□□□□ 0.4
SNX6-206ENST00000556162 WTIPA6NIX2 430 aaPredicted RBP17.52■□□□□ 0.4
SNX6-206ENST00000556162 RIMBP2O15034 1052 aa17.52■□□□□ 0.4
SNX6-206ENST00000556162 KIAA2012Q0VF49 1180 aa17.52■□□□□ 0.4
SNX6-206ENST00000556162 AOC3Q16853 763 aa17.52■□□□□ 0.4
SNX6-206ENST00000556162 UBE4AQ14139 1066 aa17.52■□□□□ 0.39
SNX6-206ENST00000556162 HSP90AB4PQ58FF6 505 aa17.52■□□□□ 0.39
SNX6-206ENST00000556162 VGLL2Q8N8G2 317 aa17.52■□□□□ 0.39
SNX6-206ENST00000556162 JDP2Q8WYK2 163 aa17.52■□□□□ 0.39
SNX6-206ENST00000556162 GPR101Q96P66 508 aaPredicted RBP17.52■□□□□ 0.39
SNX6-206ENST00000556162 SNAP23O00161 211 aa17.51■□□□□ 0.39
SNX6-206ENST00000556162 G3V3G9 751 aa17.5■□□□□ 0.39
SNX6-206ENST00000556162 NEFLP07196 543 aa17.5■□□□□ 0.39
SNX6-206ENST00000556162 PUM3Q15397 648 aaKnown RBP17.5■□□□□ 0.39
SNX6-206ENST00000556162 DCAF8Q5TAQ9 597 aa17.5■□□□□ 0.39
SNX6-206ENST00000556162 EXOC6BQ9Y2D4 811 aa17.5■□□□□ 0.39
SNX6-206ENST00000556162 DUOX1Q9NRD9 1551 aa17.5■□□□□ 0.39
SNX6-206ENST00000556162 TFCP2Q12800 502 aa17.5■□□□□ 0.39
SNX6-206ENST00000556162 ERC1Q8IUD2 1116 aa17.5■□□□□ 0.39
SNX6-206ENST00000556162 MED23Q9ULK4 1368 aa17.49■□□□□ 0.39
SNX6-206ENST00000556162 LTBP1Q14766 1721 aa17.49■□□□□ 0.39
SNX6-206ENST00000556162 SASH1O94885 1247 aa17.49■□□□□ 0.39
SNX6-206ENST00000556162 NIM1KQ8IY84 436 aa17.49■□□□□ 0.39
SNX6-206ENST00000556162 AKAP2Q9Y2D5 859 aa17.49■□□□□ 0.39
SNX6-206ENST00000556162 IFIT1P09914 478 aaKnown RBP17.48■□□□□ 0.39
SNX6-206ENST00000556162 LPIN2Q92539 896 aa17.48■□□□□ 0.39
SNX6-206ENST00000556162 RAB11FIP3O75154 756 aa17.48■□□□□ 0.39
SNX6-206ENST00000556162 SLC5A1P13866 664 aa17.48■□□□□ 0.39
SNX6-206ENST00000556162 FGFR2P21802 821 aa17.48■□□□□ 0.39
SNX6-206ENST00000556162 ATP2B3Q16720 1220 aa17.48■□□□□ 0.39
SNX6-206ENST00000556162 DOK7Q18PE1 504 aa17.48■□□□□ 0.39
SNX6-206ENST00000556162 C15orf52Q6ZUT6 534 aaKnown RBP17.48■□□□□ 0.39
SNX6-206ENST00000556162 TXNRD3Q86VQ6 643 aa17.48■□□□□ 0.39
SNX6-206ENST00000556162 SBF1O95248 1867 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms