RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 RRP12Q5JTH9 1297 aaKnown RBP13.94□□□□□ -0.18
XRCC3-208ENST00000554811 RALYLQ86SE5 291 aaKnown RBP13.94□□□□□ -0.18
XRCC3-208ENST00000554811 TMX1Q9H3N1 280 aa13.94□□□□□ -0.18
XRCC3-208ENST00000554811 MRVI1Q9Y6F6 885 aa13.94□□□□□ -0.18
XRCC3-208ENST00000554811 TOB2Q14106 344 aaPredicted RBP13.93□□□□□ -0.18
XRCC3-208ENST00000554811 TTLL7Q6ZT98 887 aa13.93□□□□□ -0.18
XRCC3-208ENST00000554811 SPATA31D1Q6ZQQ2 1576 aa13.93□□□□□ -0.18
XRCC3-208ENST00000554811 MCMDC2Q4G0Z9 681 aa13.93□□□□□ -0.18
XRCC3-208ENST00000554811 TTC39AQ5SRH9 613 aa13.93□□□□□ -0.18
XRCC3-208ENST00000554811 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.93□□□□□ -0.18
XRCC3-208ENST00000554811 RIMBP3CA6NJZ7 1639 aa13.93□□□□□ -0.18
XRCC3-208ENST00000554811 RIMBP3BA6NNM3 1639 aa13.93□□□□□ -0.18
XRCC3-208ENST00000554811 RIMBP3Q9UFD9 1639 aa13.93□□□□□ -0.18
XRCC3-208ENST00000554811 LRRC24Q50LG9 513 aa13.93□□□□□ -0.18
XRCC3-208ENST00000554811 IDH1O75874 414 aaKnown RBP13.92□□□□□ -0.18
XRCC3-208ENST00000554811 SNRPA1P09661 255 aaKnown RBP13.92□□□□□ -0.18
XRCC3-208ENST00000554811 NFXL1Q6ZNB6 911 aa13.92□□□□□ -0.18
XRCC3-208ENST00000554811 U2AF2P26368 475 aaKnown RBP eCLIP13.92□□□□□ -0.18
XRCC3-208ENST00000554811 MARCKSP29966 332 aaPredicted RBP13.92□□□□□ -0.18
XRCC3-208ENST00000554811 PI16Q6UXB8 463 aa13.92□□□□□ -0.18
XRCC3-208ENST00000554811 NPHP3Q7Z494 1330 aa13.92□□□□□ -0.18
XRCC3-208ENST00000554811 KRT32Q14532 448 aa13.92□□□□□ -0.18
XRCC3-208ENST00000554811 SYNE3Q6ZMZ3 975 aa13.92□□□□□ -0.18
XRCC3-208ENST00000554811 AOPEPQ8N6M6 819 aa13.92□□□□□ -0.18
XRCC3-208ENST00000554811 METTL22Q9BUU2 404 aaPredicted RBP13.92□□□□□ -0.18
XRCC3-208ENST00000554811 PUS3Q9BZE2 481 aaKnown RBP13.92□□□□□ -0.18
XRCC3-208ENST00000554811 PAG1Q9NWQ8 432 aa13.92□□□□□ -0.18
XRCC3-208ENST00000554811 CEP126Q9P2H0 1117 aa13.92□□□□□ -0.18
XRCC3-208ENST00000554811 CFAP45Q9UL16 551 aa13.92□□□□□ -0.18
XRCC3-208ENST00000554811 SCRN1Q12765 414 aa13.91□□□□□ -0.18
XRCC3-208ENST00000554811 PAXIP1Q6ZW49 1069 aaPredicted RBP13.91□□□□□ -0.18
XRCC3-208ENST00000554811 ARHGEF25Q86VW2 580 aa13.91□□□□□ -0.18
XRCC3-208ENST00000554811 IFNL2Q8IZJ0 200 aa13.91□□□□□ -0.18
XRCC3-208ENST00000554811 MYRIPQ8NFW9 859 aa13.91□□□□□ -0.18
XRCC3-208ENST00000554811 MAP7D2Q96T17 732 aa13.91□□□□□ -0.18
XRCC3-208ENST00000554811 KCNF1Q9H3M0 494 aa13.91□□□□□ -0.18
XRCC3-208ENST00000554811 BCL2L12Q9HB09 334 aa13.91□□□□□ -0.18
XRCC3-208ENST00000554811 GOLGA8BA8MQT2 603 aa13.91□□□□□ -0.18
XRCC3-208ENST00000554811 CCDC57Q2TAC2 916 aa13.91□□□□□ -0.18
XRCC3-208ENST00000554811 HOMER1Q86YM7 354 aa13.91□□□□□ -0.18
XRCC3-208ENST00000554811 PRDM11Q9NQV5 511 aa13.91□□□□□ -0.18
XRCC3-208ENST00000554811 DDX19AQ9NUU7 478 aaKnown RBP13.91□□□□□ -0.18
XRCC3-208ENST00000554811 U3KPZ7 1027 aaPredicted RBP13.91□□□□□ -0.18
XRCC3-208ENST00000554811 EVA1CP58658 441 aa13.91□□□□□ -0.18
XRCC3-208ENST00000554811 CCDC112Q8NEF3 446 aa13.91□□□□□ -0.18
XRCC3-208ENST00000554811 SLC52A2Q9HAB3 445 aa13.91□□□□□ -0.18
XRCC3-208ENST00000554811 TECPR2O15040 1411 aa13.9□□□□□ -0.18
XRCC3-208ENST00000554811 HOXB7P09629 217 aa13.9□□□□□ -0.18
XRCC3-208ENST00000554811 PGBD1Q96JS3 809 aa13.9□□□□□ -0.18
XRCC3-208ENST00000554811 USP28Q96RU2 1077 aa13.9□□□□□ -0.18
XRCC3-208ENST00000554811 FAM89AQ96GI7 184 aa13.9□□□□□ -0.18
XRCC3-208ENST00000554811 PTPN12Q05209 780 aaKnown RBP13.89□□□□□ -0.19
XRCC3-208ENST00000554811 HELBQ8NG08 1087 aaPredicted RBP13.89□□□□□ -0.19
XRCC3-208ENST00000554811 TM6SF1Q9BZW5 370 aa13.89□□□□□ -0.19
XRCC3-208ENST00000554811 BABAM1Q9NWV8 329 aa13.89□□□□□ -0.19
XRCC3-208ENST00000554811 C11orf57Q6ZUT1 292 aaPredicted RBP13.89□□□□□ -0.19
XRCC3-208ENST00000554811 GTF3C6Q969F1 213 aa13.89□□□□□ -0.19
XRCC3-208ENST00000554811 C3P01024 1663 aa13.89□□□□□ -0.19
XRCC3-208ENST00000554811 KLF18A0A0U1RQI7 1052 aa13.89□□□□□ -0.19
XRCC3-208ENST00000554811 MICU3Q86XE3 530 aa13.89□□□□□ -0.19
XRCC3-208ENST00000554811 CCAR2Q8N163 923 aaKnown RBP13.88□□□□□ -0.19
XRCC3-208ENST00000554811 C8orf76Q96K31 380 aa13.88□□□□□ -0.19
XRCC3-208ENST00000554811 NRXN3Q9Y4C0 1643 aa13.88□□□□□ -0.19
XRCC3-208ENST00000554811 HMG20BQ9P0W2 317 aa13.88□□□□□ -0.19
XRCC3-208ENST00000554811 RGPD8O14715 1765 aaPredicted RBP13.88□□□□□ -0.19
XRCC3-208ENST00000554811 A0A1B0GUL7 405 aa13.88□□□□□ -0.19
XRCC3-208ENST00000554811 TRDNQ13061 729 aa13.88□□□□□ -0.19
XRCC3-208ENST00000554811 CCDC158Q5M9N0 1113 aa13.88□□□□□ -0.19
XRCC3-208ENST00000554811 CNNM1Q9NRU3 951 aa13.88□□□□□ -0.19
XRCC3-208ENST00000554811 ORC3Q9UBD5 711 aaPredicted RBP13.88□□□□□ -0.19
XRCC3-208ENST00000554811 REREQ9P2R6 1566 aa13.88□□□□□ -0.19
XRCC3-208ENST00000554811 PXDNQ92626 1479 aa13.88□□□□□ -0.19
XRCC3-208ENST00000554811 STOX1Q6ZVD7 989 aa13.87□□□□□ -0.19
XRCC3-208ENST00000554811 ZNF771Q7L3S4 317 aaPredicted RBP13.87□□□□□ -0.19
XRCC3-208ENST00000554811 MYL10Q9BUA6 226 aa13.87□□□□□ -0.19
XRCC3-208ENST00000554811 CLSTN2Q9H4D0 955 aa13.87□□□□□ -0.19
XRCC3-208ENST00000554811 DIP2AQ14689 1571 aa13.87□□□□□ -0.19
XRCC3-208ENST00000554811 SKILP12757 684 aa13.87□□□□□ -0.19
XRCC3-208ENST00000554811 LMOD1P29536 600 aaPredicted RBP13.87□□□□□ -0.19
XRCC3-208ENST00000554811 ZNF75DP51815 510 aa13.87□□□□□ -0.19
XRCC3-208ENST00000554811 PDILTQ8N807 584 aa13.87□□□□□ -0.19
XRCC3-208ENST00000554811 ZNF396Q96N95 335 aaPredicted RBP13.87□□□□□ -0.19
XRCC3-208ENST00000554811 CWC25Q9NXE8 425 aaPredicted RBP13.87□□□□□ -0.19
XRCC3-208ENST00000554811 ADORA1P30542 326 aa13.87□□□□□ -0.19
XRCC3-208ENST00000554811 DHX32Q7L7V1 743 aaKnown RBP13.87□□□□□ -0.19
XRCC3-208ENST00000554811 CEP57L1Q8IYX8 460 aa13.87□□□□□ -0.19
XRCC3-208ENST00000554811 TMEM87AQ8NBN3 555 aa13.87□□□□□ -0.19
XRCC3-208ENST00000554811 KIAA1524Q8TCG1 905 aa13.87□□□□□ -0.19
XRCC3-208ENST00000554811 CACTINQ8WUQ7 758 aaKnown RBP13.87□□□□□ -0.19
XRCC3-208ENST00000554811 PRIMPOLQ96LW4 560 aa13.87□□□□□ -0.19
XRCC3-208ENST00000554811 DIP2BQ9P265 1576 aa13.87□□□□□ -0.19
XRCC3-208ENST00000554811 MON2Q7Z3U7 1717 aa13.87□□□□□ -0.19
XRCC3-208ENST00000554811 PHKG2P15735 406 aa13.86□□□□□ -0.19
XRCC3-208ENST00000554811 HSPA2P54652 639 aa13.86□□□□□ -0.19
XRCC3-208ENST00000554811 TMC6Q7Z403 805 aa13.86□□□□□ -0.19
XRCC3-208ENST00000554811 SYNE4Q8N205 404 aa13.86□□□□□ -0.19
XRCC3-208ENST00000554811 IQSEC3Q9UPP2 1182 aaPredicted RBP13.86□□□□□ -0.19
XRCC3-208ENST00000554811 METTL24Q5JXM2 366 aa13.86□□□□□ -0.19
XRCC3-208ENST00000554811 SPECC1Q5M775 1068 aa13.86□□□□□ -0.19
XRCC3-208ENST00000554811 ATP5JP18859 108 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms