RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 XDHP47989 1333 aa13.72□□□□□ -0.21
PNN-203ENST00000554117 RASSF10A6NK89 507 aa13.72□□□□□ -0.21
PNN-203ENST00000554117 SLC4A2P04920 1241 aa13.72□□□□□ -0.21
PNN-203ENST00000554117 FKBP5Q13451 457 aaPredicted RBP13.72□□□□□ -0.21
PNN-203ENST00000554117 POTEDQ86YR6 584 aa13.72□□□□□ -0.21
PNN-203ENST00000554117 WDR63Q8IWG1 891 aa13.72□□□□□ -0.21
PNN-203ENST00000554117 WDR33Q9C0J8 1336 aaKnown RBP13.71□□□□□ -0.21
PNN-203ENST00000554117 IGHMBP2P38935 993 aaKnown RBP13.71□□□□□ -0.21
PNN-203ENST00000554117 CTCFP49711 727 aaPredicted RBP13.71□□□□□ -0.21
PNN-203ENST00000554117 VEGFBP49765 207 aa13.71□□□□□ -0.21
PNN-203ENST00000554117 GPSM2P81274 684 aa13.71□□□□□ -0.21
PNN-203ENST00000554117 GRM1Q13255 1194 aa13.71□□□□□ -0.21
PNN-203ENST00000554117 CDC37L1Q7L3B6 337 aa13.71□□□□□ -0.21
PNN-203ENST00000554117 MICALL2Q8IY33 904 aa13.71□□□□□ -0.21
PNN-203ENST00000554117 DPF2Q92785 391 aa13.71□□□□□ -0.21
PNN-203ENST00000554117 DCPSQ96C86 337 aaKnown RBP13.71□□□□□ -0.21
PNN-203ENST00000554117 ZNF408Q9H9D4 720 aa13.71□□□□□ -0.21
PNN-203ENST00000554117 SALL2Q9Y467 1007 aaPredicted RBP13.71□□□□□ -0.21
PNN-203ENST00000554117 ATP2B4P23634 1241 aa13.7□□□□□ -0.22
PNN-203ENST00000554117 CTSWP56202 376 aa13.7□□□□□ -0.22
PNN-203ENST00000554117 COL13A1Q5TAT6 717 aaPredicted RBP13.7□□□□□ -0.22
PNN-203ENST00000554117 TSPYL6Q8N831 410 aa13.7□□□□□ -0.22
PNN-203ENST00000554117 TBC1D16Q8TBP0 767 aa13.7□□□□□ -0.22
PNN-203ENST00000554117 CCDC85AQ96PX6 553 aaPredicted RBP13.7□□□□□ -0.22
PNN-203ENST00000554117 MPHOSPH8Q99549 860 aa13.7□□□□□ -0.22
PNN-203ENST00000554117 PODXL2Q9NZ53 605 aa13.7□□□□□ -0.22
PNN-203ENST00000554117 PSMD14O00487 310 aa13.69□□□□□ -0.22
PNN-203ENST00000554117 CELF2O95319 508 aaKnown RBP13.69□□□□□ -0.22
PNN-203ENST00000554117 DOK7Q18PE1 504 aa13.69□□□□□ -0.22
PNN-203ENST00000554117 FAM9BQ8IZU0 186 aa13.69□□□□□ -0.22
PNN-203ENST00000554117 SEC31BQ9NQW1 1179 aa13.69□□□□□ -0.22
PNN-203ENST00000554117 POLLQ9UGP5 575 aa13.69□□□□□ -0.22
PNN-203ENST00000554117 ZNF646O15015 1829 aaPredicted RBP13.69□□□□□ -0.22
PNN-203ENST00000554117 CASP8AP2Q9UKL3 1982 aa13.69□□□□□ -0.22
PNN-203ENST00000554117 FANCIQ9NVI1 1328 aa13.68□□□□□ -0.22
PNN-203ENST00000554117 YDJCA8MPS7 323 aa13.68□□□□□ -0.22
PNN-203ENST00000554117 KCNJ4P48050 445 aa13.68□□□□□ -0.22
PNN-203ENST00000554117 FLIIQ13045 1269 aa13.68□□□□□ -0.22
PNN-203ENST00000554117 UBE3BQ7Z3V4 1068 aa13.68□□□□□ -0.22
PNN-203ENST00000554117 DNAAF4Q8WXU2 420 aa13.68□□□□□ -0.22
PNN-203ENST00000554117 CAPNS2Q96L46 248 aa13.68□□□□□ -0.22
PNN-203ENST00000554117 PCNTO95613 3336 aa13.68□□□□□ -0.22
PNN-203ENST00000554117 COL4A1P02462 1669 aa13.67□□□□□ -0.22
PNN-203ENST00000554117 NEURL1BA8MQ27 555 aa13.67□□□□□ -0.22
PNN-203ENST00000554117 CAPN15O75808 1086 aa13.67□□□□□ -0.22
PNN-203ENST00000554117 CWF19L2Q2TBE0 894 aaKnown RBP13.67□□□□□ -0.22
PNN-203ENST00000554117 CCDC184Q52MB2 194 aa13.67□□□□□ -0.22
PNN-203ENST00000554117 RBM26Q5T8P6 1007 aaKnown RBP13.67□□□□□ -0.22
PNN-203ENST00000554117 PODNQ7Z5L7 613 aa13.67□□□□□ -0.22
PNN-203ENST00000554117 SLC51AQ86UW1 340 aa13.67□□□□□ -0.22
PNN-203ENST00000554117 JARID2Q92833 1246 aaPredicted RBP13.67□□□□□ -0.22
PNN-203ENST00000554117 FBXW7Q969H0 707 aa13.67□□□□□ -0.22
PNN-203ENST00000554117 ANKRD2Q9GZV1 360 aa13.67□□□□□ -0.22
PNN-203ENST00000554117 PRDM10Q9NQV6 1147 aa13.67□□□□□ -0.22
PNN-203ENST00000554117 ZBTB12Q9Y330 459 aaPredicted RBP13.67□□□□□ -0.22
PNN-203ENST00000554117 TLL2Q9Y6L7 1015 aa13.67□□□□□ -0.22
PNN-203ENST00000554117 RTL9Q8NET4 1388 aa13.67□□□□□ -0.22
PNN-203ENST00000554117 ARAP2Q8WZ64 1704 aa13.67□□□□□ -0.22
PNN-203ENST00000554117 TRAF5O00463 557 aa13.66□□□□□ -0.22
PNN-203ENST00000554117 KIF4BQ2VIQ3 1234 aa13.66□□□□□ -0.22
PNN-203ENST00000554117 SULF1Q8IWU6 871 aa13.66□□□□□ -0.22
PNN-203ENST00000554117 OGFOD1Q8N543 542 aa13.66□□□□□ -0.22
PNN-203ENST00000554117 C2orf69Q8N8R5 385 aa13.66□□□□□ -0.22
PNN-203ENST00000554117 AGBL3Q8NEM8 1001 aa13.66□□□□□ -0.22
PNN-203ENST00000554117 LINS1Q8NG48 757 aa13.66□□□□□ -0.22
PNN-203ENST00000554117 HHIPL1Q96JK4 782 aa13.66□□□□□ -0.22
PNN-203ENST00000554117 GPR101Q96P66 508 aaPredicted RBP13.66□□□□□ -0.22
PNN-203ENST00000554117 GLIS2Q9BZE0 524 aaPredicted RBP13.66□□□□□ -0.22
PNN-203ENST00000554117 BSDC1Q9NW68 430 aaPredicted RBP13.66□□□□□ -0.22
PNN-203ENST00000554117 CHMP3Q9Y3E7 222 aa13.66□□□□□ -0.22
PNN-203ENST00000554117 MED23Q9ULK4 1368 aa13.66□□□□□ -0.22
PNN-203ENST00000554117 AK9Q5TCS8 1911 aa13.66□□□□□ -0.22
PNN-203ENST00000554117 MYO3BQ8WXR4 1341 aa13.65□□□□□ -0.22
PNN-203ENST00000554117 FOXN1O15353 648 aa13.65□□□□□ -0.22
PNN-203ENST00000554117 IGKV5-2P06315 115 aa13.65□□□□□ -0.22
PNN-203ENST00000554117 MAP2K2P36507 400 aa13.65□□□□□ -0.22
PNN-203ENST00000554117 TBC1D10BQ4KMP7 808 aaPredicted RBP13.65□□□□□ -0.22
PNN-203ENST00000554117 TAF7LQ5H9L4 462 aa13.65□□□□□ -0.22
PNN-203ENST00000554117 KRT26Q7Z3Y9 468 aa13.65□□□□□ -0.22
PNN-203ENST00000554117 TTLL11Q8NHH1 800 aa13.65□□□□□ -0.22
PNN-203ENST00000554117 PGAP2Q9UHJ9 254 aa13.65□□□□□ -0.22
PNN-203ENST00000554117 LEMD3Q9Y2U8 911 aa13.65□□□□□ -0.22
PNN-203ENST00000554117 PAPPA2Q9BXP8 1791 aa13.64□□□□□ -0.23
PNN-203ENST00000554117 ANKRD18BA2A2Z9 1011 aa13.64□□□□□ -0.23
PNN-203ENST00000554117 USP17L3A6NCW0 530 aa13.64□□□□□ -0.23
PNN-203ENST00000554117 USP17L4A6NCW7 530 aa13.64□□□□□ -0.23
PNN-203ENST00000554117 CA12O43570 354 aa13.64□□□□□ -0.23
PNN-203ENST00000554117 VIL1P09327 827 aaKnown RBP13.64□□□□□ -0.23
PNN-203ENST00000554117 MMP14P50281 582 aa13.64□□□□□ -0.23
PNN-203ENST00000554117 CCT4P50991 539 aaKnown RBP13.64□□□□□ -0.23
PNN-203ENST00000554117 EXOSC9Q06265 439 aaKnown RBP13.64□□□□□ -0.23
PNN-203ENST00000554117 GCKRQ14397 625 aa13.64□□□□□ -0.23
PNN-203ENST00000554117 CYP4F22Q6NT55 531 aa13.64□□□□□ -0.23
PNN-203ENST00000554117 RSBN1LQ6PCB5 846 aaPredicted RBP13.64□□□□□ -0.23
PNN-203ENST00000554117 USP17L1Q7RTZ2 530 aa13.64□□□□□ -0.23
PNN-203ENST00000554117 SAMD7Q7Z3H4 446 aa13.64□□□□□ -0.23
PNN-203ENST00000554117 TRPM4Q8TD43 1214 aa13.64□□□□□ -0.23
PNN-203ENST00000554117 GREM2Q9H772 168 aa13.64□□□□□ -0.23
PNN-203ENST00000554117 WBP1LQ9NX94 342 aa13.64□□□□□ -0.23
PNN-203ENST00000554117 ITGA6P23229 1130 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms