RNA–Protein interactions for RNA: ENST00000553930.5

SDR39U1-206, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 5 BASIC

Gene SDR39U1, Length 1,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-206ENST00000553930 ABT1Q9ULW3 272 aaKnown RBP22.47■■□□□ 1.19
SDR39U1-206ENST00000553930 H7C1D1 291 aa22.46■■□□□ 1.19
SDR39U1-206ENST00000553930 VAMP4O75379 141 aa22.46■■□□□ 1.19
SDR39U1-206ENST00000553930 UFL1O94874 794 aa22.46■■□□□ 1.19
SDR39U1-206ENST00000553930 FMR1Q06787 632 aaKnown RBP eCLIP22.46■■□□□ 1.19
SDR39U1-206ENST00000553930 DOK7Q18PE1 504 aa22.46■■□□□ 1.19
SDR39U1-206ENST00000553930 ZC3H15Q8WU90 426 aaKnown RBP22.46■■□□□ 1.19
SDR39U1-206ENST00000553930 DPF2Q92785 391 aa22.46■■□□□ 1.19
SDR39U1-206ENST00000553930 GPR101Q96P66 508 aaPredicted RBP22.46■■□□□ 1.19
SDR39U1-206ENST00000553930 ZBTB12Q9Y330 459 aaPredicted RBP22.46■■□□□ 1.19
SDR39U1-206ENST00000553930 TRAF5O00463 557 aa22.45■■□□□ 1.18
SDR39U1-206ENST00000553930 MICALL2Q8IY33 904 aa22.45■■□□□ 1.18
SDR39U1-206ENST00000553930 TTLL11Q8NHH1 800 aa22.45■■□□□ 1.18
SDR39U1-206ENST00000553930 CDC5LQ99459 802 aaKnown RBP22.45■■□□□ 1.18
SDR39U1-206ENST00000553930 SHTN1A0MZ66 631 aa22.44■■□□□ 1.18
SDR39U1-206ENST00000553930 H7C1W4 665 aa22.44■■□□□ 1.18
SDR39U1-206ENST00000553930 HIRAP54198 1017 aaPredicted RBP22.44■■□□□ 1.18
SDR39U1-206ENST00000553930 EXOSC9Q06265 439 aaKnown RBP22.44■■□□□ 1.18
SDR39U1-206ENST00000553930 FKBP5Q13451 457 aaPredicted RBP22.44■■□□□ 1.18
SDR39U1-206ENST00000553930 FAM9BQ8IZU0 186 aa22.44■■□□□ 1.18
SDR39U1-206ENST00000553930 TRPM4Q8TD43 1214 aa22.44■■□□□ 1.18
SDR39U1-206ENST00000553930 RTL9Q8NET4 1388 aa22.43■■□□□ 1.18
SDR39U1-206ENST00000553930 RPS12P25398 132 aaKnown RBP22.43■■□□□ 1.18
SDR39U1-206ENST00000553930 CST9Q5W186 159 aa22.43■■□□□ 1.18
SDR39U1-206ENST00000553930 UBE3BQ7Z3V4 1068 aa22.43■■□□□ 1.18
SDR39U1-206ENST00000553930 GREM2Q9H772 168 aa22.43■■□□□ 1.18
SDR39U1-206ENST00000553930 KCNQ5Q9NR82 932 aa22.43■■□□□ 1.18
SDR39U1-206ENST00000553930 XDHP47989 1333 aa22.43■■□□□ 1.18
SDR39U1-206ENST00000553930 G3V3G9 751 aa22.42■■□□□ 1.18
SDR39U1-206ENST00000553930 GCKRQ14397 625 aa22.42■■□□□ 1.18
SDR39U1-206ENST00000553930 DCAF8Q5TAQ9 597 aa22.42■■□□□ 1.18
SDR39U1-206ENST00000553930 DNAAF4Q8WXU2 420 aa22.42■■□□□ 1.18
SDR39U1-206ENST00000553930 GLIS2Q9BZE0 524 aaPredicted RBP22.41■■□□□ 1.18
SDR39U1-206ENST00000553930 MYH16Q9H6N6 1097 aa22.41■■□□□ 1.18
SDR39U1-206ENST00000553930 SPINK5Q9NQ38 1064 aaPredicted RBP22.41■■□□□ 1.18
SDR39U1-206ENST00000553930 BSDC1Q9NW68 430 aaPredicted RBP22.41■■□□□ 1.18
SDR39U1-206ENST00000553930 WDR33Q9C0J8 1336 aaKnown RBP22.41■■□□□ 1.18
SDR39U1-206ENST00000553930 ATP2B4P23634 1241 aa22.4■■□□□ 1.18
SDR39U1-206ENST00000553930 CDC37L1Q7L3B6 337 aa22.4■■□□□ 1.18
SDR39U1-206ENST00000553930 LINS1Q8NG48 757 aa22.4■■□□□ 1.18
SDR39U1-206ENST00000553930 PLA2G12BQ9BX93 195 aa22.4■■□□□ 1.18
SDR39U1-206ENST00000553930 VIL1P09327 827 aaKnown RBP22.39■■□□□ 1.18
SDR39U1-206ENST00000553930 SAMD7Q7Z3H4 446 aa22.39■■□□□ 1.18
SDR39U1-206ENST00000553930 TNS4Q8IZW8 715 aa22.39■■□□□ 1.18
SDR39U1-206ENST00000553930 TLL2Q9Y6L7 1015 aa22.39■■□□□ 1.18
SDR39U1-206ENST00000553930 FOXN1O15353 648 aa22.38■■□□□ 1.17
SDR39U1-206ENST00000553930 CELF2O95319 508 aaKnown RBP22.38■■□□□ 1.17
SDR39U1-206ENST00000553930 CASP7P55210 303 aa22.38■■□□□ 1.17
SDR39U1-206ENST00000553930 AIDAQ96BJ3 306 aa22.38■■□□□ 1.17
SDR39U1-206ENST00000553930 MINPP1Q9UNW1 487 aa22.38■■□□□ 1.17
SDR39U1-206ENST00000553930 ECE1P42892 770 aa22.37■■□□□ 1.17
SDR39U1-206ENST00000553930 TBC1D10BQ4KMP7 808 aaPredicted RBP22.37■■□□□ 1.17
SDR39U1-206ENST00000553930 WBP1LQ9NX94 342 aa22.37■■□□□ 1.17
SDR39U1-206ENST00000553930 EGFRP00533 1210 aa22.36■■□□□ 1.17
SDR39U1-206ENST00000553930 IGHMBP2P38935 993 aaKnown RBP22.36■■□□□ 1.17
SDR39U1-206ENST00000553930 PAXIP1Q6ZW49 1069 aaPredicted RBP22.36■■□□□ 1.17
SDR39U1-206ENST00000553930 CAPNS2Q96L46 248 aa22.36■■□□□ 1.17
SDR39U1-206ENST00000553930 PODNQ7Z5L7 613 aa22.35■■□□□ 1.17
SDR39U1-206ENST00000553930 SAPCD2Q86UD0 394 aa22.35■■□□□ 1.17
SDR39U1-206ENST00000553930 TRPM7Q96QT4 1865 aa22.35■■□□□ 1.17
SDR39U1-206ENST00000553930 CSF1RP07333 972 aa22.34■■□□□ 1.17
SDR39U1-206ENST00000553930 ITGA6P23229 1130 aa22.34■■□□□ 1.17
SDR39U1-206ENST00000553930 CTCFP49711 727 aaPredicted RBP22.34■■□□□ 1.17
SDR39U1-206ENST00000553930 CCT4P50991 539 aaKnown RBP22.34■■□□□ 1.17
SDR39U1-206ENST00000553930 MAP2K1Q02750 393 aaPredicted RBP22.34■■□□□ 1.17
SDR39U1-206ENST00000553930 FAM161AQ3B820 660 aa22.34■■□□□ 1.17
SDR39U1-206ENST00000553930 RBM26Q5T8P6 1007 aaKnown RBP22.34■■□□□ 1.17
SDR39U1-206ENST00000553930 CYP4F22Q6NT55 531 aa22.34■■□□□ 1.17
SDR39U1-206ENST00000553930 RSBN1LQ6PCB5 846 aaPredicted RBP22.34■■□□□ 1.17
SDR39U1-206ENST00000553930 USP48Q86UV5 1035 aa22.34■■□□□ 1.17
SDR39U1-206ENST00000553930 AGBL3Q8NEM8 1001 aa22.34■■□□□ 1.17
SDR39U1-206ENST00000553930 ZNF408Q9H9D4 720 aa22.34■■□□□ 1.17
SDR39U1-206ENST00000553930 MED23Q9ULK4 1368 aa22.34■■□□□ 1.17
SDR39U1-206ENST00000553930 ZNF609O15014 1411 aa22.34■■□□□ 1.17
SDR39U1-206ENST00000553930 WTIPA6NIX2 430 aaPredicted RBP22.33■■□□□ 1.17
SDR39U1-206ENST00000553930 F6X3S4 739 aa22.33■■□□□ 1.17
SDR39U1-206ENST00000553930 KIF4BQ2VIQ3 1234 aa22.33■■□□□ 1.17
SDR39U1-206ENST00000553930 MYH3P11055 1940 aa22.33■■□□□ 1.17
SDR39U1-206ENST00000553930 SCN9AQ15858 1988 aa22.33■■□□□ 1.16
SDR39U1-206ENST00000553930 USP17L3A6NCW0 530 aa22.32■■□□□ 1.16
SDR39U1-206ENST00000553930 USP17L4A6NCW7 530 aa22.32■■□□□ 1.16
SDR39U1-206ENST00000553930 BEND3Q5T5X7 828 aa22.32■■□□□ 1.16
SDR39U1-206ENST00000553930 USP17L1Q7RTZ2 530 aa22.32■■□□□ 1.16
SDR39U1-206ENST00000553930 KRT26Q7Z3Y9 468 aa22.32■■□□□ 1.16
SDR39U1-206ENST00000553930 DCPSQ96C86 337 aaKnown RBP22.32■■□□□ 1.16
SDR39U1-206ENST00000553930 HHIPL1Q96JK4 782 aa22.32■■□□□ 1.16
SDR39U1-206ENST00000553930 PRDM10Q9NQV6 1147 aa22.32■■□□□ 1.16
SDR39U1-206ENST00000553930 CACNA1FO60840 1977 aa22.32■■□□□ 1.16
SDR39U1-206ENST00000553930 ZNF521Q96K83 1311 aa22.32■■□□□ 1.16
SDR39U1-206ENST00000553930 ZNF280AP59817 542 aaPredicted RBP22.31■■□□□ 1.16
SDR39U1-206ENST00000553930 GRM1Q13255 1194 aa22.31■■□□□ 1.16
SDR39U1-206ENST00000553930 MPHOSPH8Q99549 860 aa22.31■■□□□ 1.16
SDR39U1-206ENST00000553930 LEMD3Q9Y2U8 911 aa22.31■■□□□ 1.16
SDR39U1-206ENST00000553930 GMLQ99445 158 aa22.31■■□□□ 1.16
SDR39U1-206ENST00000553930 ANKRD2Q9GZV1 360 aa22.31■■□□□ 1.16
SDR39U1-206ENST00000553930 THSD7BQ9C0I4 1608 aa22.29■■□□□ 1.16
SDR39U1-206ENST00000553930 ANKRD18BA2A2Z9 1011 aa22.29■■□□□ 1.16
SDR39U1-206ENST00000553930 USP17L8P0C7I0 530 aa22.29■■□□□ 1.16
SDR39U1-206ENST00000553930 MAP2K2P36507 400 aa22.29■■□□□ 1.16
SDR39U1-206ENST00000553930 FOXO4P98177 505 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms