RNA–Protein interactions for RNA: ENST00000553654.1

NEMP1-203, Transcript of nuclear envelope integral membrane protein 1, humanhuman

TSL 5

Gene NEMP1, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMP1-203ENST00000553654 PODXL2Q9NZ53 605 aa13.17□□□□□ -0.3
NEMP1-203ENST00000553654 POLLQ9UGP5 575 aa13.17□□□□□ -0.3
NEMP1-203ENST00000553654 COL4A1P02462 1669 aa13.16□□□□□ -0.3
NEMP1-203ENST00000553654 C6orf229H3BNL8 230 aa13.16□□□□□ -0.3
NEMP1-203ENST00000553654 PSMD14O00487 310 aa13.16□□□□□ -0.3
NEMP1-203ENST00000553654 ECE2O60344 883 aa13.16□□□□□ -0.3
NEMP1-203ENST00000553654 BRPF1P55201 1214 aaPredicted RBP13.16□□□□□ -0.3
NEMP1-203ENST00000553654 GPSM2P81274 684 aa13.16□□□□□ -0.3
NEMP1-203ENST00000553654 CCDC191Q8NCU4 936 aa13.16□□□□□ -0.3
NEMP1-203ENST00000553654 TBC1D16Q8TBP0 767 aa13.16□□□□□ -0.3
NEMP1-203ENST00000553654 DBNDD1Q9H9R9 158 aa13.16□□□□□ -0.3
NEMP1-203ENST00000553654 DDX58O95786 925 aaKnown RBP13.15□□□□□ -0.3
NEMP1-203ENST00000553654 PCCAP05165 728 aaPredicted RBP13.15□□□□□ -0.3
NEMP1-203ENST00000553654 NOGQ13253 232 aa13.15□□□□□ -0.3
NEMP1-203ENST00000553654 GRM1Q13255 1194 aa13.15□□□□□ -0.3
NEMP1-203ENST00000553654 CCDC152Q4G0S7 254 aa13.15□□□□□ -0.3
NEMP1-203ENST00000553654 RTL9Q8NET4 1388 aa13.15□□□□□ -0.3
NEMP1-203ENST00000553654 SHTN1A0MZ66 631 aa13.14□□□□□ -0.31
NEMP1-203ENST00000553654 APAF1O14727 1248 aa13.14□□□□□ -0.31
NEMP1-203ENST00000553654 CACNB1Q02641 598 aaPredicted RBP13.14□□□□□ -0.31
NEMP1-203ENST00000553654 ZNF428Q96B54 188 aa13.14□□□□□ -0.31
NEMP1-203ENST00000553654 ABHD8Q96I13 439 aa13.14□□□□□ -0.31
NEMP1-203ENST00000553654 ZC3H12CQ9C0D7 883 aaKnown RBP13.14□□□□□ -0.31
NEMP1-203ENST00000553654 CWC25Q9NXE8 425 aaPredicted RBP13.14□□□□□ -0.31
NEMP1-203ENST00000553654 ZBTB12Q9Y330 459 aaPredicted RBP13.14□□□□□ -0.31
NEMP1-203ENST00000553654 SCN9AQ15858 1988 aa13.14□□□□□ -0.31
NEMP1-203ENST00000553654 RIMBP2O15034 1052 aa13.13□□□□□ -0.31
NEMP1-203ENST00000553654 PDE8AO60658 829 aa13.13□□□□□ -0.31
NEMP1-203ENST00000553654 AOC2O75106 756 aa13.13□□□□□ -0.31
NEMP1-203ENST00000553654 UFL1O94874 794 aa13.13□□□□□ -0.31
NEMP1-203ENST00000553654 RTL5Q5HYW3 569 aaPredicted RBP13.13□□□□□ -0.31
NEMP1-203ENST00000553654 CCDC30Q5VVM6 783 aa13.13□□□□□ -0.31
NEMP1-203ENST00000553654 SAMD7Q7Z3H4 446 aa13.13□□□□□ -0.31
NEMP1-203ENST00000553654 KRT26Q7Z3Y9 468 aa13.13□□□□□ -0.31
NEMP1-203ENST00000553654 MYD88Q99836 296 aa13.13□□□□□ -0.31
NEMP1-203ENST00000553654 METTL22Q9BUU2 404 aaPredicted RBP13.13□□□□□ -0.31
NEMP1-203ENST00000553654 PHAXQ9H814 394 aaKnown RBP13.13□□□□□ -0.31
NEMP1-203ENST00000553654 ZNF408Q9H9D4 720 aa13.13□□□□□ -0.31
NEMP1-203ENST00000553654 GGA1Q9UJY5 639 aa13.13□□□□□ -0.31
NEMP1-203ENST00000553654 PSME4Q14997 1843 aa13.13□□□□□ -0.31
NEMP1-203ENST00000553654 VIL1P09327 827 aaKnown RBP13.12□□□□□ -0.31
NEMP1-203ENST00000553654 KIF4BQ2VIQ3 1234 aa13.12□□□□□ -0.31
NEMP1-203ENST00000553654 TBC1D10BQ4KMP7 808 aaPredicted RBP13.12□□□□□ -0.31
NEMP1-203ENST00000553654 DCPSQ96C86 337 aaKnown RBP13.12□□□□□ -0.31
NEMP1-203ENST00000553654 ANKIB1Q9P2G1 1089 aa13.12□□□□□ -0.31
NEMP1-203ENST00000553654 XDHP47989 1333 aa13.12□□□□□ -0.31
NEMP1-203ENST00000553654 ABCB7O75027 752 aa13.11□□□□□ -0.31
NEMP1-203ENST00000553654 HUNKP57058 714 aa13.11□□□□□ -0.31
NEMP1-203ENST00000553654 DOK7Q18PE1 504 aa13.11□□□□□ -0.31
NEMP1-203ENST00000553654 USP48Q86UV5 1035 aa13.11□□□□□ -0.31
NEMP1-203ENST00000553654 ANKRD18AQ8IVF6 992 aa13.11□□□□□ -0.31
NEMP1-203ENST00000553654 C8orf58Q8NAV2 365 aa13.11□□□□□ -0.31
NEMP1-203ENST00000553654 AGBL3Q8NEM8 1001 aa13.11□□□□□ -0.31
NEMP1-203ENST00000553654 CDC5LQ99459 802 aaKnown RBP13.11□□□□□ -0.31
NEMP1-203ENST00000553654 GBA2Q9HCG7 927 aaPredicted RBP13.11□□□□□ -0.31
NEMP1-203ENST00000553654 SEC31BQ9NQW1 1179 aa13.11□□□□□ -0.31
NEMP1-203ENST00000553654 MYH3P11055 1940 aa13.1□□□□□ -0.31
NEMP1-203ENST00000553654 G3V3G9 751 aa13.1□□□□□ -0.31
NEMP1-203ENST00000553654 ELL2O00472 640 aaPredicted RBP13.1□□□□□ -0.31
NEMP1-203ENST00000553654 EGFRP00533 1210 aa13.1□□□□□ -0.31
NEMP1-203ENST00000553654 DSG3P32926 999 aa13.1□□□□□ -0.31
NEMP1-203ENST00000553654 CTSWP56202 376 aa13.1□□□□□ -0.31
NEMP1-203ENST00000553654 ZNF280AP59817 542 aaPredicted RBP13.1□□□□□ -0.31
NEMP1-203ENST00000553654 DCAF8Q5TAQ9 597 aa13.1□□□□□ -0.31
NEMP1-203ENST00000553654 SULF1Q8IWU6 871 aa13.1□□□□□ -0.31
NEMP1-203ENST00000553654 C2orf69Q8N8R5 385 aa13.1□□□□□ -0.31
NEMP1-203ENST00000553654 CCDC102AQ96A19 550 aa13.1□□□□□ -0.31
NEMP1-203ENST00000553654 POLR2AP24928 1970 aaKnown RBP13.1□□□□□ -0.31
NEMP1-203ENST00000553654 ATP2B4P23634 1241 aa13.09□□□□□ -0.31
NEMP1-203ENST00000553654 NEXNQ0ZGT2 675 aa13.09□□□□□ -0.31
NEMP1-203ENST00000553654 CCDC27Q2M243 656 aa13.09□□□□□ -0.31
NEMP1-203ENST00000553654 RGMBQ6NW40 437 aa13.09□□□□□ -0.31
NEMP1-203ENST00000553654 RSBN1LQ6PCB5 846 aaPredicted RBP13.09□□□□□ -0.31
NEMP1-203ENST00000553654 KSR2Q6VAB6 950 aa13.09□□□□□ -0.31
NEMP1-203ENST00000553654 STK31Q9BXU1 1019 aa13.09□□□□□ -0.31
NEMP1-203ENST00000553654 KCNQ5Q9NR82 932 aa13.09□□□□□ -0.31
NEMP1-203ENST00000553654 SAGE1Q9NXZ1 904 aa13.09□□□□□ -0.31
NEMP1-203ENST00000553654 GGA3Q9NZ52 723 aa13.09□□□□□ -0.31
NEMP1-203ENST00000553654 MAP3K2Q9Y2U5 619 aa13.09□□□□□ -0.31
NEMP1-203ENST00000553654 PITPNM2Q9BZ72 1349 aa13.09□□□□□ -0.31
NEMP1-203ENST00000553654 MED23Q9ULK4 1368 aa13.08□□□□□ -0.31
NEMP1-203ENST00000553654 ADM5C9JUS6 153 aa13.08□□□□□ -0.32
NEMP1-203ENST00000553654 PODNQ7Z5L7 613 aa13.08□□□□□ -0.32
NEMP1-203ENST00000553654 TSKSQ9UJT2 592 aa13.08□□□□□ -0.32
NEMP1-203ENST00000553654 PAPPA2Q9BXP8 1791 aa13.07□□□□□ -0.32
NEMP1-203ENST00000553654 PI4KAP2A4QPH2 592 aa13.07□□□□□ -0.32
NEMP1-203ENST00000553654 USP17L3A6NCW0 530 aa13.07□□□□□ -0.32
NEMP1-203ENST00000553654 USP17L4A6NCW7 530 aa13.07□□□□□ -0.32
NEMP1-203ENST00000553654 FAM155AB1AL88 458 aaPredicted RBP13.07□□□□□ -0.32
NEMP1-203ENST00000553654 IGKV5-2P06315 115 aa13.07□□□□□ -0.32
NEMP1-203ENST00000553654 FKBP1BP68106 108 aa13.07□□□□□ -0.32
NEMP1-203ENST00000553654 MKRN4PQ13434 485 aaPredicted RBP13.07□□□□□ -0.32
NEMP1-203ENST00000553654 RBM26Q5T8P6 1007 aaKnown RBP13.07□□□□□ -0.32
NEMP1-203ENST00000553654 USP17L1Q7RTZ2 530 aa13.07□□□□□ -0.32
NEMP1-203ENST00000553654 PI4KAP1Q8N8J0 262 aa13.07□□□□□ -0.32
NEMP1-203ENST00000553654 GMLQ99445 158 aa13.07□□□□□ -0.32
NEMP1-203ENST00000553654 BSDC1Q9NW68 430 aaPredicted RBP13.07□□□□□ -0.32
NEMP1-203ENST00000553654 IL16Q14005 1332 aa13.07□□□□□ -0.32
NEMP1-203ENST00000553654 CASP8AP2Q9UKL3 1982 aa13.07□□□□□ -0.32
NEMP1-203ENST00000553654 USP17L8P0C7I0 530 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 170.1 ms