RNA–Protein interactions for RNA: ENST00000553277.5

LRP1-204, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 1,693 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-204ENST00000553277 SIL1Q9H173 461 aa22.69■■□□□ 1.22
LRP1-204ENST00000553277 EPB41L2O43491 1005 aaKnown RBP22.68■■□□□ 1.22
LRP1-204ENST00000553277 RAB3GAP1Q15042 981 aa22.68■■□□□ 1.22
LRP1-204ENST00000553277 SLC16A10Q8TF71 515 aa22.68■■□□□ 1.22
LRP1-204ENST00000553277 ZNF594Q96JF6 807 aaPredicted RBP22.68■■□□□ 1.22
LRP1-204ENST00000553277 GPR108Q9NPR9 543 aa22.68■■□□□ 1.22
LRP1-204ENST00000553277 RIPOR2Q9Y4F9 1068 aa22.68■■□□□ 1.22
LRP1-204ENST00000553277 CLASRPQ8N2M8 674 aaKnown RBP22.68■■□□□ 1.22
LRP1-204ENST00000553277 CRY2Q49AN0 593 aa22.67■■□□□ 1.22
LRP1-204ENST00000553277 CCDC85AQ96PX6 553 aaPredicted RBP22.67■■□□□ 1.22
LRP1-204ENST00000553277 IL1RAPL2Q9NP60 686 aa22.67■■□□□ 1.22
LRP1-204ENST00000553277 MX1P20591 662 aa22.66■■□□□ 1.22
LRP1-204ENST00000553277 LRRC24Q50LG9 513 aa22.66■■□□□ 1.22
LRP1-204ENST00000553277 L1TD1Q5T7N2 865 aaKnown RBP22.66■■□□□ 1.22
LRP1-204ENST00000553277 CLEC17AQ6ZS10 378 aa22.66■■□□□ 1.22
LRP1-204ENST00000553277 GBP4Q96PP9 640 aa22.66■■□□□ 1.22
LRP1-204ENST00000553277 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.66■■□□□ 1.22
LRP1-204ENST00000553277 MMP10P09238 476 aa22.65■■□□□ 1.22
LRP1-204ENST00000553277 ST5P78524 1137 aa22.65■■□□□ 1.22
LRP1-204ENST00000553277 PUS3Q9BZE2 481 aaKnown RBP22.65■■□□□ 1.22
LRP1-204ENST00000553277 TNRC6CQ9HCJ0 1690 aaKnown RBP22.65■■□□□ 1.22
LRP1-204ENST00000553277 CD2BP2O95400 341 aaKnown RBP22.65■■□□□ 1.22
LRP1-204ENST00000553277 LDHAL6AQ6ZMR3 332 aa22.65■■□□□ 1.22
LRP1-204ENST00000553277 IL17RAQ96F46 866 aa22.65■■□□□ 1.22
LRP1-204ENST00000553277 SEC31BQ9NQW1 1179 aa22.65■■□□□ 1.22
LRP1-204ENST00000553277 TFCP2Q12800 502 aa22.64■■□□□ 1.21
LRP1-204ENST00000553277 TAF7LQ5H9L4 462 aa22.64■■□□□ 1.21
LRP1-204ENST00000553277 EAF2Q96CJ1 260 aaPredicted RBP22.64■■□□□ 1.21
LRP1-204ENST00000553277 CDC5LQ99459 802 aaKnown RBP22.64■■□□□ 1.21
LRP1-204ENST00000553277 HSP90AA1P07900 732 aaKnown RBP22.63■■□□□ 1.21
LRP1-204ENST00000553277 VGLL2Q8N8G2 317 aa22.62■■□□□ 1.21
LRP1-204ENST00000553277 TNPO1Q92973 898 aaKnown RBP22.62■■□□□ 1.21
LRP1-204ENST00000553277 BRIP1Q9BX63 1249 aa22.62■■□□□ 1.21
LRP1-204ENST00000553277 PARP3Q9Y6F1 533 aa22.62■■□□□ 1.21
LRP1-204ENST00000553277 NPHP1O15259 732 aa22.62■■□□□ 1.21
LRP1-204ENST00000553277 ST18O60284 1047 aa22.62■■□□□ 1.21
LRP1-204ENST00000553277 TNNI3KQ59H18 835 aa22.62■■□□□ 1.21
LRP1-204ENST00000553277 PDGFDQ9GZP0 370 aaPredicted RBP22.62■■□□□ 1.21
LRP1-204ENST00000553277 CEP126Q9P2H0 1117 aa22.62■■□□□ 1.21
LRP1-204ENST00000553277 ISY1Q9ULR0 285 aaKnown RBP22.62■■□□□ 1.21
LRP1-204ENST00000553277 FPGT-TNNI3KV9GXZ4 949 aa22.62■■□□□ 1.21
LRP1-204ENST00000553277 TRAK2O60296 914 aa22.61■■□□□ 1.21
LRP1-204ENST00000553277 HOXA10P31260 410 aaPredicted RBP22.61■■□□□ 1.21
LRP1-204ENST00000553277 SKOR2Q2VWA4 1001 aaPredicted RBP22.61■■□□□ 1.21
LRP1-204ENST00000553277 CCDC24Q8N4L8 307 aa22.61■■□□□ 1.21
LRP1-204ENST00000553277 CWC22Q9HCG8 908 aaKnown RBP22.61■■□□□ 1.21
LRP1-204ENST00000553277 BSDC1Q9NW68 430 aaPredicted RBP22.61■■□□□ 1.21
LRP1-204ENST00000553277 ANKRD31Q8N7Z5 1873 aa22.6■■□□□ 1.21
LRP1-204ENST00000553277 TTC41PQ6P2S7 1318 aa22.6■■□□□ 1.21
LRP1-204ENST00000553277 MROH5Q6ZUA9 1318 aa22.6■■□□□ 1.21
LRP1-204ENST00000553277 IGHMBP2P38935 993 aaKnown RBP22.6■■□□□ 1.21
LRP1-204ENST00000553277 ANAPC15P60006 121 aa22.6■■□□□ 1.21
LRP1-204ENST00000553277 COL4A1P02462 1669 aa22.6■■□□□ 1.21
LRP1-204ENST00000553277 MSL1Q68DK7 614 aa22.59■■□□□ 1.21
LRP1-204ENST00000553277 AACSQ86V21 672 aa22.59■■□□□ 1.21
LRP1-204ENST00000553277 MPHOSPH8Q99549 860 aa22.59■■□□□ 1.21
LRP1-204ENST00000553277 ESYT1Q9BSJ8 1104 aa22.59■■□□□ 1.21
LRP1-204ENST00000553277 RPS8P62241 208 aaKnown RBP22.58■■□□□ 1.21
LRP1-204ENST00000553277 ANKRD18AQ8IVF6 992 aa22.58■■□□□ 1.21
LRP1-204ENST00000553277 CNNM1Q9NRU3 951 aa22.58■■□□□ 1.21
LRP1-204ENST00000553277 AKAP2Q9Y2D5 859 aa22.58■■□□□ 1.21
LRP1-204ENST00000553277 FSD2A1L4K1 749 aa22.58■■□□□ 1.2
LRP1-204ENST00000553277 PDE8BO95263 885 aa22.58■■□□□ 1.2
LRP1-204ENST00000553277 IFIT2P09913 472 aaKnown RBP22.58■■□□□ 1.2
LRP1-204ENST00000553277 MCM2P49736 904 aa22.58■■□□□ 1.2
LRP1-204ENST00000553277 DDX46Q7L014 1031 aaKnown RBP22.58■■□□□ 1.2
LRP1-204ENST00000553277 TAF1P21675 1872 aa22.57■■□□□ 1.2
LRP1-204ENST00000553277 ZNF609O15014 1411 aa22.57■■□□□ 1.2
LRP1-204ENST00000553277 NUCB2P80303 420 aa22.57■■□□□ 1.2
LRP1-204ENST00000553277 PI4K2BQ8TCG2 481 aa22.57■■□□□ 1.2
LRP1-204ENST00000553277 CELF1Q92879 486 aaKnown RBP22.57■■□□□ 1.2
LRP1-204ENST00000553277 MCCP23508 829 aa22.56■■□□□ 1.2
LRP1-204ENST00000553277 CHMLP26374 656 aa22.56■■□□□ 1.2
LRP1-204ENST00000553277 ECHDC1Q9NTX5 307 aa22.56■■□□□ 1.2
LRP1-204ENST00000553277 DBNLQ9UJU6 430 aaKnown RBP22.56■■□□□ 1.2
LRP1-204ENST00000553277 GRAPQ13588 217 aa22.55■■□□□ 1.2
LRP1-204ENST00000553277 METTL24Q5JXM2 366 aa22.55■■□□□ 1.2
LRP1-204ENST00000553277 GRAPLQ8TC17 118 aaPredicted RBP22.55■■□□□ 1.2
LRP1-204ENST00000553277 CRAMP1Q96RY5 1269 aa22.55■■□□□ 1.2
LRP1-204ENST00000553277 FGFR2P21802 821 aa22.55■■□□□ 1.2
LRP1-204ENST00000553277 PDE6BP35913 854 aa22.55■■□□□ 1.2
LRP1-204ENST00000553277 A0A1B0GUL7 405 aa22.54■■□□□ 1.2
LRP1-204ENST00000553277 GPATCH3Q96I76 525 aa22.54■■□□□ 1.2
LRP1-204ENST00000553277 CCDC8Q9H0W5 538 aaPredicted RBP22.54■■□□□ 1.2
LRP1-204ENST00000553277 TLR7Q9NYK1 1049 aaKnown RBP22.54■■□□□ 1.2
LRP1-204ENST00000553277 SPEF2Q9C093 1822 aa22.53■■□□□ 1.2
LRP1-204ENST00000553277 GLRX3O76003 335 aaKnown RBP22.53■■□□□ 1.2
LRP1-204ENST00000553277 SRGNP10124 158 aa22.53■■□□□ 1.2
LRP1-204ENST00000553277 RBM17Q96I25 401 aaKnown RBP22.53■■□□□ 1.2
LRP1-204ENST00000553277 MINPP1Q9UNW1 487 aa22.53■■□□□ 1.2
LRP1-204ENST00000553277 TIMM10P62072 90 aa22.52■■□□□ 1.2
LRP1-204ENST00000553277 RPGRQ92834 1020 aaKnown RBP22.52■■□□□ 1.2
LRP1-204ENST00000553277 A0A1B0GUL6 1792 aa22.52■■□□□ 1.2
LRP1-204ENST00000553277 GOLGA6L3A6NEY3 463 aa22.52■■□□□ 1.2
LRP1-204ENST00000553277 GOLGA6L22H0YM25 854 aa22.52■■□□□ 1.2
LRP1-204ENST00000553277 BBOX1O75936 387 aa22.52■■□□□ 1.2
LRP1-204ENST00000553277 CYP2E1P05181 493 aaPredicted RBP22.52■■□□□ 1.2
LRP1-204ENST00000553277 CHRNDQ07001 517 aa22.52■■□□□ 1.2
LRP1-204ENST00000553277 PUM3Q15397 648 aaKnown RBP22.52■■□□□ 1.2
LRP1-204ENST00000553277 DBNDD2Q9BQY9 259 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms