RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 CWC27Q6UX04 472 aaKnown RBP23.74■■□□□ 1.39
RBFOX1-215ENST00000553186 MPHOSPH8Q99549 860 aa23.74■■□□□ 1.39
RBFOX1-215ENST00000553186 NDUFB9Q9Y6M9 179 aa23.74■■□□□ 1.39
RBFOX1-215ENST00000553186 CARMIL3Q8ND23 1372 aa23.73■■□□□ 1.39
RBFOX1-215ENST00000553186 DIAPH3Q9NSV4 1193 aa23.73■■□□□ 1.39
RBFOX1-215ENST00000553186 ANO2Q9NQ90 1003 aa23.72■■□□□ 1.39
RBFOX1-215ENST00000553186 ZNF827Q17R98 1081 aa23.72■■□□□ 1.39
RBFOX1-215ENST00000553186 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.72■■□□□ 1.39
RBFOX1-215ENST00000553186 FSD1Q9BTV5 496 aa23.72■■□□□ 1.39
RBFOX1-215ENST00000553186 COL4A1P02462 1669 aa23.72■■□□□ 1.39
RBFOX1-215ENST00000553186 EPB41L2O43491 1005 aaKnown RBP23.71■■□□□ 1.39
RBFOX1-215ENST00000553186 IGHMBP2P38935 993 aaKnown RBP23.71■■□□□ 1.39
RBFOX1-215ENST00000553186 AKT1S1Q96B36 256 aa23.71■■□□□ 1.39
RBFOX1-215ENST00000553186 DNAJC2Q99543 621 aaKnown RBP23.71■■□□□ 1.39
RBFOX1-215ENST00000553186 TBC1D2Q9BYX2 928 aa23.71■■□□□ 1.39
RBFOX1-215ENST00000553186 HIP1O00291 1037 aa23.71■■□□□ 1.39
RBFOX1-215ENST00000553186 FGFR2P21802 821 aa23.71■■□□□ 1.39
RBFOX1-215ENST00000553186 BECN1Q14457 450 aa23.71■■□□□ 1.39
RBFOX1-215ENST00000553186 CDC5LQ99459 802 aaKnown RBP23.71■■□□□ 1.39
RBFOX1-215ENST00000553186 CCDC158Q5M9N0 1113 aa23.7■■□□□ 1.38
RBFOX1-215ENST00000553186 CCDC24Q8N4L8 307 aa23.7■■□□□ 1.38
RBFOX1-215ENST00000553186 RUFY2Q8WXA3 655 aa23.7■■□□□ 1.38
RBFOX1-215ENST00000553186 NLRP3Q96P20 1036 aa23.7■■□□□ 1.38
RBFOX1-215ENST00000553186 HELBQ8NG08 1087 aaPredicted RBP23.69■■□□□ 1.38
RBFOX1-215ENST00000553186 IFIT1P09914 478 aaKnown RBP23.69■■□□□ 1.38
RBFOX1-215ENST00000553186 PUM3Q15397 648 aaKnown RBP23.69■■□□□ 1.38
RBFOX1-215ENST00000553186 DAXXQ9UER7 740 aaPredicted RBP23.69■■□□□ 1.38
RBFOX1-215ENST00000553186 TNS1Q9HBL0 1735 aaKnown RBP23.68■■□□□ 1.38
RBFOX1-215ENST00000553186 TM4SF1P30408 202 aa23.68■■□□□ 1.38
RBFOX1-215ENST00000553186 GORABQ5T7V8 394 aa23.68■■□□□ 1.38
RBFOX1-215ENST00000553186 FAM227BQ96M60 508 aa23.68■■□□□ 1.38
RBFOX1-215ENST00000553186 RFX7Q2KHR2 1363 aa23.68■■□□□ 1.38
RBFOX1-215ENST00000553186 NMIQ13287 307 aaPredicted RBP23.68■■□□□ 1.38
RBFOX1-215ENST00000553186 DDX46Q7L014 1031 aaKnown RBP23.68■■□□□ 1.38
RBFOX1-215ENST00000553186 LPIN2Q92539 896 aa23.68■■□□□ 1.38
RBFOX1-215ENST00000553186 LSG1Q9H089 658 aaKnown RBP23.68■■□□□ 1.38
RBFOX1-215ENST00000553186 SNRKQ9NRH2 765 aa23.68■■□□□ 1.38
RBFOX1-215ENST00000553186 PAG1Q9NWQ8 432 aa23.68■■□□□ 1.38
RBFOX1-215ENST00000553186 TFCP2L1Q9NZI6 479 aa23.68■■□□□ 1.38
RBFOX1-215ENST00000553186 TTC39AQ5SRH9 613 aa23.67■■□□□ 1.38
RBFOX1-215ENST00000553186 ANKRD18AQ8IVF6 992 aa23.67■■□□□ 1.38
RBFOX1-215ENST00000553186 KBTBD3Q8NAB2 608 aa23.67■■□□□ 1.38
RBFOX1-215ENST00000553186 SNX21Q969T3 373 aa23.67■■□□□ 1.38
RBFOX1-215ENST00000553186 A0A0D9SFI3 127 aa23.66■■□□□ 1.38
RBFOX1-215ENST00000553186 GOLIM4O00461 696 aa23.66■■□□□ 1.38
RBFOX1-215ENST00000553186 TAF5LO75529 589 aa23.66■■□□□ 1.38
RBFOX1-215ENST00000553186 CNBD1Q8NA66 436 aa23.66■■□□□ 1.38
RBFOX1-215ENST00000553186 CELF1Q92879 486 aaKnown RBP23.66■■□□□ 1.38
RBFOX1-215ENST00000553186 ZNF512BQ96KM6 892 aaPredicted RBP23.66■■□□□ 1.38
RBFOX1-215ENST00000553186 BSDC1Q9NW68 430 aaPredicted RBP23.66■■□□□ 1.38
RBFOX1-215ENST00000553186 RAD50Q92878 1312 aa23.66■■□□□ 1.38
RBFOX1-215ENST00000553186 CHRNDQ07001 517 aa23.65■■□□□ 1.38
RBFOX1-215ENST00000553186 SCARF1Q14162 830 aa23.65■■□□□ 1.38
RBFOX1-215ENST00000553186 SNAP23O00161 211 aa23.65■■□□□ 1.38
RBFOX1-215ENST00000553186 PRR5LQ6MZQ0 368 aa23.65■■□□□ 1.38
RBFOX1-215ENST00000553186 TICAM2Q86XR7 235 aa23.64■■□□□ 1.38
RBFOX1-215ENST00000553186 ANP32EQ9BTT0 268 aa23.64■■□□□ 1.38
RBFOX1-215ENST00000553186 CASZ1Q86V15 1759 aa23.64■■□□□ 1.37
RBFOX1-215ENST00000553186 NPHP1O15259 732 aa23.64■■□□□ 1.37
RBFOX1-215ENST00000553186 RABEP1Q15276 862 aa23.64■■□□□ 1.37
RBFOX1-215ENST00000553186 COL23A1Q86Y22 540 aaPredicted RBP23.64■■□□□ 1.37
RBFOX1-215ENST00000553186 IL17RAQ96F46 866 aa23.64■■□□□ 1.37
RBFOX1-215ENST00000553186 PALD1Q9ULE6 856 aa23.64■■□□□ 1.37
RBFOX1-215ENST00000553186 CHGBP05060 677 aa23.63■■□□□ 1.37
RBFOX1-215ENST00000553186 HSPA4P34932 840 aa23.63■■□□□ 1.37
RBFOX1-215ENST00000553186 KIAA1211Q6ZU35 1233 aa23.63■■□□□ 1.37
RBFOX1-215ENST00000553186 ANTXR1Q9H6X2 564 aa23.63■■□□□ 1.37
RBFOX1-215ENST00000553186 SERPINB2P05120 415 aa23.62■■□□□ 1.37
RBFOX1-215ENST00000553186 DDR1Q08345 913 aa23.62■■□□□ 1.37
RBFOX1-215ENST00000553186 CCDC102BQ68D86 513 aa23.62■■□□□ 1.37
RBFOX1-215ENST00000553186 MED23Q9ULK4 1368 aa23.62■■□□□ 1.37
RBFOX1-215ENST00000553186 RGPD3A6NKT7 1758 aaPredicted RBP23.62■■□□□ 1.37
RBFOX1-215ENST00000553186 CD2BP2O95400 341 aaKnown RBP23.62■■□□□ 1.37
RBFOX1-215ENST00000553186 SLC5A1P13866 664 aa23.62■■□□□ 1.37
RBFOX1-215ENST00000553186 MCCP23508 829 aa23.62■■□□□ 1.37
RBFOX1-215ENST00000553186 MCAMP43121 646 aa23.62■■□□□ 1.37
RBFOX1-215ENST00000553186 ANAPC15P60006 121 aa23.62■■□□□ 1.37
RBFOX1-215ENST00000553186 RPS8P62241 208 aaKnown RBP23.62■■□□□ 1.37
RBFOX1-215ENST00000553186 FKBP4Q02790 459 aaKnown RBP eCLIP23.62■■□□□ 1.37
RBFOX1-215ENST00000553186 PTH1RQ03431 593 aa23.62■■□□□ 1.37
RBFOX1-215ENST00000553186 RGPD4Q7Z3J3 1758 aa23.62■■□□□ 1.37
RBFOX1-215ENST00000553186 TNRC6CQ9HCJ0 1690 aaKnown RBP23.62■■□□□ 1.37
RBFOX1-215ENST00000553186 PHKA1P46020 1223 aa23.61■■□□□ 1.37
RBFOX1-215ENST00000553186 MINPP1Q9UNW1 487 aa23.61■■□□□ 1.37
RBFOX1-215ENST00000553186 SPEF2Q9C093 1822 aa23.61■■□□□ 1.37
RBFOX1-215ENST00000553186 POLRMTO00411 1230 aaKnown RBP23.61■■□□□ 1.37
RBFOX1-215ENST00000553186 ARID4AP29374 1257 aaPredicted RBP23.61■■□□□ 1.37
RBFOX1-215ENST00000553186 PI16Q6UXB8 463 aa23.61■■□□□ 1.37
RBFOX1-215ENST00000553186 TAF1P21675 1872 aa23.6■■□□□ 1.37
RBFOX1-215ENST00000553186 ZAP70P43403 619 aa23.6■■□□□ 1.37
RBFOX1-215ENST00000553186 ZNF589Q86UQ0 364 aaPredicted RBP23.6■■□□□ 1.37
RBFOX1-215ENST00000553186 CCDC171Q6TFL3 1326 aa23.6■■□□□ 1.37
RBFOX1-215ENST00000553186 HSCBQ8IWL3 235 aa23.59■■□□□ 1.37
RBFOX1-215ENST00000553186 FLAD1Q8NFF5 587 aa23.59■■□□□ 1.37
RBFOX1-215ENST00000553186 CAMKK2Q96RR4 588 aa23.59■■□□□ 1.37
RBFOX1-215ENST00000553186 ARAP2Q8WZ64 1704 aa23.59■■□□□ 1.37
RBFOX1-215ENST00000553186 ERICH6Q7L0X2 663 aa23.59■■□□□ 1.37
RBFOX1-215ENST00000553186 UQCRFS1P1P0C7P4 283 aa23.58■■□□□ 1.36
RBFOX1-215ENST00000553186 PNPLA7Q6ZV29 1317 aa23.57■■□□□ 1.36
RBFOX1-215ENST00000553186 CRY2Q49AN0 593 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms