RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 FGD1P98174 961 aa14.58□□□□□ -0.08
HDAC7-230ENST00000552960 NCBP1Q09161 790 aaKnown RBP14.58□□□□□ -0.08
HDAC7-230ENST00000552960 NMIQ13287 307 aaPredicted RBP14.58□□□□□ -0.08
HDAC7-230ENST00000552960 HSP90AB4PQ58FF6 505 aa14.58□□□□□ -0.08
HDAC7-230ENST00000552960 LRP10Q7Z4F1 713 aa14.58□□□□□ -0.08
HDAC7-230ENST00000552960 FILIP1Q7Z7B0 1213 aa14.58□□□□□ -0.08
HDAC7-230ENST00000552960 FSD1Q9BTV5 496 aa14.58□□□□□ -0.08
HDAC7-230ENST00000552960 TRMT1Q9NXH9 659 aaKnown RBP14.58□□□□□ -0.08
HDAC7-230ENST00000552960 ASAP1Q9ULH1 1129 aa14.58□□□□□ -0.08
HDAC7-230ENST00000552960 TAF6LQ9Y6J9 622 aa14.58□□□□□ -0.08
HDAC7-230ENST00000552960 ADAMTS7Q9UKP4 1686 aa14.58□□□□□ -0.08
HDAC7-230ENST00000552960 LTBP4Q8N2S1 1624 aa14.58□□□□□ -0.08
HDAC7-230ENST00000552960 ATP5J2-PTCD1G3V325 749 aa14.58□□□□□ -0.08
HDAC7-230ENST00000552960 GOLGA6L19H0YKK7 550 aa14.58□□□□□ -0.08
HDAC7-230ENST00000552960 POLA2Q14181 598 aa14.58□□□□□ -0.08
HDAC7-230ENST00000552960 GTPBP4Q9BZE4 634 aaKnown RBP14.58□□□□□ -0.08
HDAC7-230ENST00000552960 CCDC171Q6TFL3 1326 aa14.57□□□□□ -0.08
HDAC7-230ENST00000552960 NBPF26B4DH59 902 aa14.57□□□□□ -0.08
HDAC7-230ENST00000552960 H3BQV1 296 aa14.57□□□□□ -0.08
HDAC7-230ENST00000552960 SNRPA1P09661 255 aaKnown RBP14.57□□□□□ -0.08
HDAC7-230ENST00000552960 ARID5BQ14865 1188 aa14.57□□□□□ -0.08
HDAC7-230ENST00000552960 IFFO2Q5TF58 517 aa14.57□□□□□ -0.08
HDAC7-230ENST00000552960 NBPF14Q5TI25 921 aa14.57□□□□□ -0.08
HDAC7-230ENST00000552960 ZSCAN25Q6NSZ9 544 aa14.57□□□□□ -0.08
HDAC7-230ENST00000552960 NBPF10Q6P3W6 841 aaKnown RBP14.57□□□□□ -0.08
HDAC7-230ENST00000552960 RIC3Q7Z5B4 369 aa14.57□□□□□ -0.08
HDAC7-230ENST00000552960 NBPF15Q8N660 670 aa14.57□□□□□ -0.08
HDAC7-230ENST00000552960 FMNL2Q96PY5 1086 aa14.57□□□□□ -0.08
HDAC7-230ENST00000552960 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.57□□□□□ -0.08
HDAC7-230ENST00000552960 PDCP20941 246 aa14.56□□□□□ -0.08
HDAC7-230ENST00000552960 ZNF75DP51815 510 aa14.56□□□□□ -0.08
HDAC7-230ENST00000552960 CACTINQ8WUQ7 758 aaKnown RBP14.56□□□□□ -0.08
HDAC7-230ENST00000552960 TAOK2Q9UL54 1235 aa14.56□□□□□ -0.08
HDAC7-230ENST00000552960 KAT6BQ8WYB5 2073 aa14.56□□□□□ -0.08
HDAC7-230ENST00000552960 ZBTB22O15209 634 aa14.56□□□□□ -0.08
HDAC7-230ENST00000552960 EPB41L2O43491 1005 aaKnown RBP14.56□□□□□ -0.08
HDAC7-230ENST00000552960 JAK2O60674 1132 aa14.56□□□□□ -0.08
HDAC7-230ENST00000552960 KLHDC4Q8TBB5 520 aa14.56□□□□□ -0.08
HDAC7-230ENST00000552960 SYTL4Q96C24 671 aaPredicted RBP14.56□□□□□ -0.08
HDAC7-230ENST00000552960 KAZALD1Q96I82 304 aa14.56□□□□□ -0.08
HDAC7-230ENST00000552960 MYD88Q99836 296 aa14.56□□□□□ -0.08
HDAC7-230ENST00000552960 LRRC2Q9BYS8 371 aa14.56□□□□□ -0.08
HDAC7-230ENST00000552960 LEO1Q8WVC0 666 aaPredicted RBP14.56□□□□□ -0.08
HDAC7-230ENST00000552960 ANKRD7Q92527 254 aa14.56□□□□□ -0.08
HDAC7-230ENST00000552960 IL17RAQ96F46 866 aa14.56□□□□□ -0.08
HDAC7-230ENST00000552960 SCAND2PQ9GZW5 306 aaPredicted RBP14.56□□□□□ -0.08
HDAC7-230ENST00000552960 BECN2A8MW95 431 aa14.55□□□□□ -0.08
HDAC7-230ENST00000552960 SLC27A2O14975 620 aa14.55□□□□□ -0.08
HDAC7-230ENST00000552960 PSMA5P28066 241 aa14.55□□□□□ -0.08
HDAC7-230ENST00000552960 NECTIN1Q15223 517 aa14.55□□□□□ -0.08
HDAC7-230ENST00000552960 TTLL7Q6ZT98 887 aa14.55□□□□□ -0.08
HDAC7-230ENST00000552960 ERCC4Q92889 916 aaPredicted RBP14.55□□□□□ -0.08
HDAC7-230ENST00000552960 EDC3Q96F86 508 aaKnown RBP14.55□□□□□ -0.08
HDAC7-230ENST00000552960 PKD1L3Q7Z443 1732 aa14.55□□□□□ -0.08
HDAC7-230ENST00000552960 GOLGB1Q14789 3259 aaKnown RBP14.55□□□□□ -0.08
HDAC7-230ENST00000552960 CCDC144BQ3MJ40 725 aa14.55□□□□□ -0.08
HDAC7-230ENST00000552960 CCDC144CPQ8IYA2 1237 aa14.55□□□□□ -0.08
HDAC7-230ENST00000552960 PIGBQ92521 554 aa14.55□□□□□ -0.08
HDAC7-230ENST00000552960 SUCLG2Q96I99 432 aa14.55□□□□□ -0.08
HDAC7-230ENST00000552960 EVI5LQ96CN4 794 aa14.54□□□□□ -0.08
HDAC7-230ENST00000552960 NDUFB9Q9Y6M9 179 aa14.54□□□□□ -0.08
HDAC7-230ENST00000552960 A0A0D9SFI3 127 aa14.54□□□□□ -0.08
HDAC7-230ENST00000552960 VGLL3A8MV65 326 aa14.54□□□□□ -0.08
HDAC7-230ENST00000552960 G3BP1Q13283 466 aaKnown RBP eCLIP14.54□□□□□ -0.08
HDAC7-230ENST00000552960 TTC41PQ6P2S7 1318 aa14.54□□□□□ -0.08
HDAC7-230ENST00000552960 SMTNL1A8MU46 457 aa14.54□□□□□ -0.08
HDAC7-230ENST00000552960 EPHA10Q5JZY3 1008 aa14.54□□□□□ -0.08
HDAC7-230ENST00000552960 RNF20Q5VTR2 975 aa14.54□□□□□ -0.08
HDAC7-230ENST00000552960 CTIFO43310 598 aaKnown RBP14.53□□□□□ -0.08
HDAC7-230ENST00000552960 CEP135Q66GS9 1140 aa14.53□□□□□ -0.08
HDAC7-230ENST00000552960 DDX19AQ9NUU7 478 aaKnown RBP14.53□□□□□ -0.08
HDAC7-230ENST00000552960 TLR7Q9NYK1 1049 aaKnown RBP14.53□□□□□ -0.08
HDAC7-230ENST00000552960 ABCC6O95255 1503 aa14.53□□□□□ -0.08
HDAC7-230ENST00000552960 USP27XA6NNY8 438 aa14.53□□□□□ -0.08
HDAC7-230ENST00000552960 ANKRD13DQ6ZTN6 518 aa14.53□□□□□ -0.08
HDAC7-230ENST00000552960 BRF1Q92994 677 aa14.53□□□□□ -0.08
HDAC7-230ENST00000552960 PGBD1Q96JS3 809 aa14.53□□□□□ -0.08
HDAC7-230ENST00000552960 TM6SF1Q9BZW5 370 aa14.53□□□□□ -0.08
HDAC7-230ENST00000552960 BICC1Q9H694 974 aaKnown RBP14.53□□□□□ -0.08
HDAC7-230ENST00000552960 NKX1-1Q15270 411 aaPredicted RBP14.52□□□□□ -0.08
HDAC7-230ENST00000552960 FTOQ9C0B1 505 aaKnown RBP eCLIP14.52□□□□□ -0.08
HDAC7-230ENST00000552960 CLSTN2Q9H4D0 955 aa14.52□□□□□ -0.08
HDAC7-230ENST00000552960 ZBTB3Q9H5J0 574 aa14.52□□□□□ -0.08
HDAC7-230ENST00000552960 MRC1P22897 1456 aa14.52□□□□□ -0.08
HDAC7-230ENST00000552960 KIF20AO95235 890 aa14.52□□□□□ -0.09
HDAC7-230ENST00000552960 EAF2Q96CJ1 260 aaPredicted RBP14.52□□□□□ -0.09
HDAC7-230ENST00000552960 PXDNLA1KZ92 1463 aa14.51□□□□□ -0.09
HDAC7-230ENST00000552960 ACSBG1Q96GR2 724 aa14.51□□□□□ -0.09
HDAC7-230ENST00000552960 TMOD3Q9NYL9 352 aa14.51□□□□□ -0.09
HDAC7-230ENST00000552960 OGFRQ9NZT2 677 aa14.51□□□□□ -0.09
HDAC7-230ENST00000552960 SHANK3Q9BYB0 1731 aa14.51□□□□□ -0.09
HDAC7-230ENST00000552960 CACNA1FO60840 1977 aa14.51□□□□□ -0.09
HDAC7-230ENST00000552960 NEURL1BA8MQ27 555 aa14.51□□□□□ -0.09
HDAC7-230ENST00000552960 ERVV-2B6SEH9 535 aa14.51□□□□□ -0.09
HDAC7-230ENST00000552960 UBAP1LF5GYI3 381 aa14.51□□□□□ -0.09
HDAC7-230ENST00000552960 GRM8O00222 908 aa14.51□□□□□ -0.09
HDAC7-230ENST00000552960 GUCY1B3Q02153 619 aa14.51□□□□□ -0.09
HDAC7-230ENST00000552960 ZNF589Q86UQ0 364 aaPredicted RBP14.51□□□□□ -0.09
HDAC7-230ENST00000552960 LINS1Q8NG48 757 aa14.51□□□□□ -0.09
HDAC7-230ENST00000552960 MAP4K1Q92918 833 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms