RNA–Protein interactions for RNA: ENST00000551549.1

GCN1-208, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 2

Gene GCN1, Length 258 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-208ENST00000551549 H7C1W4 665 aa12.45□□□□□ -0.42
GCN1-208ENST00000551549 ECE2O60344 883 aa12.45□□□□□ -0.42
GCN1-208ENST00000551549 UFL1O94874 794 aa12.45□□□□□ -0.42
GCN1-208ENST00000551549 HSPA1AP0DMV8 641 aaKnown RBP12.45□□□□□ -0.42
GCN1-208ENST00000551549 HSPA1BP0DMV9 641 aaKnown RBP12.45□□□□□ -0.42
GCN1-208ENST00000551549 HIRAP54198 1017 aaPredicted RBP12.45□□□□□ -0.42
GCN1-208ENST00000551549 GCKRQ14397 625 aa12.45□□□□□ -0.42
GCN1-208ENST00000551549 IFFO2Q5TF58 517 aa12.45□□□□□ -0.42
GCN1-208ENST00000551549 UBE3BQ7Z3V4 1068 aa12.45□□□□□ -0.42
GCN1-208ENST00000551549 ANKRD18AQ8IVF6 992 aa12.45□□□□□ -0.42
GCN1-208ENST00000551549 TRPM4Q8TD43 1214 aa12.45□□□□□ -0.42
GCN1-208ENST00000551549 DNAAF4Q8WXU2 420 aa12.45□□□□□ -0.42
GCN1-208ENST00000551549 EYA3Q99504 573 aa12.45□□□□□ -0.42
GCN1-208ENST00000551549 CNOT7Q9UIV1 285 aaKnown RBP12.45□□□□□ -0.42
GCN1-208ENST00000551549 GGA1Q9UJY5 639 aa12.45□□□□□ -0.42
GCN1-208ENST00000551549 RTL9Q8NET4 1388 aa12.44□□□□□ -0.42
GCN1-208ENST00000551549 VEGFBP49765 207 aa12.44□□□□□ -0.42
GCN1-208ENST00000551549 MICALL2Q8IY33 904 aa12.44□□□□□ -0.42
GCN1-208ENST00000551549 ZC3H12CQ9C0D7 883 aaKnown RBP12.44□□□□□ -0.42
GCN1-208ENST00000551549 MYH16Q9H6N6 1097 aa12.44□□□□□ -0.42
GCN1-208ENST00000551549 LRRC37AA6NMS7 1700 aa12.44□□□□□ -0.42
GCN1-208ENST00000551549 F6X3S4 739 aa12.43□□□□□ -0.42
GCN1-208ENST00000551549 H7C1D1 291 aa12.43□□□□□ -0.42
GCN1-208ENST00000551549 CASP7P55210 303 aa12.43□□□□□ -0.42
GCN1-208ENST00000551549 COL13A1Q5TAT6 717 aaPredicted RBP12.43□□□□□ -0.42
GCN1-208ENST00000551549 CST9Q5W186 159 aa12.43□□□□□ -0.42
GCN1-208ENST00000551549 LINS1Q8NG48 757 aa12.43□□□□□ -0.42
GCN1-208ENST00000551549 CDC5LQ99459 802 aaKnown RBP12.43□□□□□ -0.42
GCN1-208ENST00000551549 PGAP2Q9UHJ9 254 aa12.43□□□□□ -0.42
GCN1-208ENST00000551549 XDHP47989 1333 aa12.42□□□□□ -0.42
GCN1-208ENST00000551549 EGFRP00533 1210 aa12.42□□□□□ -0.42
GCN1-208ENST00000551549 ATP2B4P23634 1241 aa12.42□□□□□ -0.42
GCN1-208ENST00000551549 SAMD7Q7Z3H4 446 aa12.42□□□□□ -0.42
GCN1-208ENST00000551549 DPF2Q92785 391 aa12.42□□□□□ -0.42
GCN1-208ENST00000551549 GLIS2Q9BZE0 524 aaPredicted RBP12.42□□□□□ -0.42
GCN1-208ENST00000551549 BSDC1Q9NW68 430 aaPredicted RBP12.42□□□□□ -0.42
GCN1-208ENST00000551549 ABT1Q9ULW3 272 aaKnown RBP12.42□□□□□ -0.42
GCN1-208ENST00000551549 MINPP1Q9UNW1 487 aa12.42□□□□□ -0.42
GCN1-208ENST00000551549 ZNF521Q96K83 1311 aa12.41□□□□□ -0.42
GCN1-208ENST00000551549 RASSF10A6NK89 507 aa12.41□□□□□ -0.42
GCN1-208ENST00000551549 G3V3G9 751 aa12.41□□□□□ -0.42
GCN1-208ENST00000551549 VIL1P09327 827 aaKnown RBP12.41□□□□□ -0.42
GCN1-208ENST00000551549 DEFB115Q30KQ5 88 aa12.41□□□□□ -0.42
GCN1-208ENST00000551549 FAM161AQ3B820 660 aa12.41□□□□□ -0.42
GCN1-208ENST00000551549 TBC1D10BQ4KMP7 808 aaPredicted RBP12.41□□□□□ -0.42
GCN1-208ENST00000551549 DCAF8Q5TAQ9 597 aa12.41□□□□□ -0.42
GCN1-208ENST00000551549 PLA2G12BQ9BX93 195 aa12.41□□□□□ -0.42
GCN1-208ENST00000551549 CSF1RP07333 972 aa12.4□□□□□ -0.42
GCN1-208ENST00000551549 ITGA6P23229 1130 aa12.4□□□□□ -0.42
GCN1-208ENST00000551549 RPS12P25398 132 aaKnown RBP12.4□□□□□ -0.42
GCN1-208ENST00000551549 BEND3Q5T5X7 828 aa12.4□□□□□ -0.42
GCN1-208ENST00000551549 RBM26Q5T8P6 1007 aaKnown RBP12.4□□□□□ -0.42
GCN1-208ENST00000551549 DLK2Q6UY11 383 aa12.4□□□□□ -0.42
GCN1-208ENST00000551549 ZC3H15Q8WU90 426 aaKnown RBP12.4□□□□□ -0.42
GCN1-208ENST00000551549 CELF2O95319 508 aaKnown RBP12.39□□□□□ -0.43
GCN1-208ENST00000551549 IGHMBP2P38935 993 aaKnown RBP12.39□□□□□ -0.43
GCN1-208ENST00000551549 FOXO4P98177 505 aa12.39□□□□□ -0.43
GCN1-208ENST00000551549 USP48Q86UV5 1035 aa12.39□□□□□ -0.43
GCN1-208ENST00000551549 WDR33Q9C0J8 1336 aaKnown RBP12.38□□□□□ -0.43
GCN1-208ENST00000551549 CCT4P50991 539 aaKnown RBP12.38□□□□□ -0.43
GCN1-208ENST00000551549 RSBN1LQ6PCB5 846 aaPredicted RBP12.38□□□□□ -0.43
GCN1-208ENST00000551549 CDC37L1Q7L3B6 337 aa12.38□□□□□ -0.43
GCN1-208ENST00000551549 ZNF408Q9H9D4 720 aa12.38□□□□□ -0.43
GCN1-208ENST00000551549 TLL2Q9Y6L7 1015 aa12.38□□□□□ -0.43
GCN1-208ENST00000551549 FOXN1O15353 648 aa12.37□□□□□ -0.43
GCN1-208ENST00000551549 GRM1Q13255 1194 aa12.37□□□□□ -0.43
GCN1-208ENST00000551549 EPHA10Q5JZY3 1008 aa12.37□□□□□ -0.43
GCN1-208ENST00000551549 CYP4F22Q6NT55 531 aa12.37□□□□□ -0.43
GCN1-208ENST00000551549 SLC4A10Q6U841 1118 aa12.37□□□□□ -0.43
GCN1-208ENST00000551549 PAXIP1Q6ZW49 1069 aaPredicted RBP12.37□□□□□ -0.43
GCN1-208ENST00000551549 TXNRD3Q86VQ6 643 aa12.37□□□□□ -0.43
GCN1-208ENST00000551549 GMLQ99445 158 aa12.37□□□□□ -0.43
GCN1-208ENST00000551549 MPHOSPH8Q99549 860 aa12.37□□□□□ -0.43
GCN1-208ENST00000551549 ASTN2O75129 1339 aaPredicted RBP12.37□□□□□ -0.43
GCN1-208ENST00000551549 SCN9AQ15858 1988 aa12.36□□□□□ -0.43
GCN1-208ENST00000551549 MED23Q9ULK4 1368 aa12.36□□□□□ -0.43
GCN1-208ENST00000551549 ANKRD18BA2A2Z9 1011 aa12.36□□□□□ -0.43
GCN1-208ENST00000551549 USP17L3A6NCW0 530 aa12.36□□□□□ -0.43
GCN1-208ENST00000551549 USP17L4A6NCW7 530 aa12.36□□□□□ -0.43
GCN1-208ENST00000551549 ADM5C9JUS6 153 aa12.36□□□□□ -0.43
GCN1-208ENST00000551549 GRM8O00222 908 aa12.36□□□□□ -0.43
GCN1-208ENST00000551549 KLRK1P26718 216 aa12.36□□□□□ -0.43
GCN1-208ENST00000551549 ZNF280AP59817 542 aaPredicted RBP12.36□□□□□ -0.43
GCN1-208ENST00000551549 KIF4BQ2VIQ3 1234 aa12.36□□□□□ -0.43
GCN1-208ENST00000551549 USP17L1Q7RTZ2 530 aa12.36□□□□□ -0.43
GCN1-208ENST00000551549 PODNQ7Z5L7 613 aa12.36□□□□□ -0.43
GCN1-208ENST00000551549 SAPCD2Q86UD0 394 aa12.36□□□□□ -0.43
GCN1-208ENST00000551549 MRPL50Q8N5N7 158 aaKnown RBP12.36□□□□□ -0.43
GCN1-208ENST00000551549 AGBL3Q8NEM8 1001 aa12.36□□□□□ -0.43
GCN1-208ENST00000551549 CAPNS2Q96L46 248 aa12.36□□□□□ -0.43
GCN1-208ENST00000551549 MXD3Q9BW11 206 aa12.36□□□□□ -0.43
GCN1-208ENST00000551549 WBP1LQ9NX94 342 aa12.36□□□□□ -0.43
GCN1-208ENST00000551549 LEMD3Q9Y2U8 911 aa12.36□□□□□ -0.43
GCN1-208ENST00000551549 CHMP3Q9Y3E7 222 aa12.36□□□□□ -0.43
GCN1-208ENST00000551549 ZNF804BA4D1E1 1349 aa12.36□□□□□ -0.43
GCN1-208ENST00000551549 E9PSI1 815 aa12.35□□□□□ -0.43
GCN1-208ENST00000551549 SNAP23O00161 211 aa12.35□□□□□ -0.43
GCN1-208ENST00000551549 CHRNDQ07001 517 aa12.35□□□□□ -0.43
GCN1-208ENST00000551549 IFIT5Q13325 482 aaKnown RBP12.35□□□□□ -0.43
GCN1-208ENST00000551549 LMBR1LQ6UX01 489 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms