RNA–Protein interactions for RNA: ENST00000550846.5

PFDN5-211, Transcript of prefoldin subunit 5, humanhuman

TSL 2 BASIC

Gene PFDN5, Length 392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-211ENST00000550846 GOLGA2Q08379 1002 aa10.4□□□□□ -0.74
PFDN5-211ENST00000550846 SF3B3Q15393 1217 aaKnown RBP10.4□□□□□ -0.74
PFDN5-211ENST00000550846 DCAF8Q5TAQ9 597 aa10.4□□□□□ -0.74
PFDN5-211ENST00000550846 TMC4Q7Z404 712 aa10.4□□□□□ -0.74
PFDN5-211ENST00000550846 TBC1D16Q8TBP0 767 aa10.4□□□□□ -0.74
PFDN5-211ENST00000550846 ZC3H15Q8WU90 426 aaKnown RBP10.4□□□□□ -0.74
PFDN5-211ENST00000550846 HYPKQ9NX55 129 aa10.4□□□□□ -0.74
PFDN5-211ENST00000550846 GGA3Q9NZ52 723 aa10.4□□□□□ -0.74
PFDN5-211ENST00000550846 ANKIB1Q9P2G1 1089 aa10.4□□□□□ -0.74
PFDN5-211ENST00000550846 SCAF8Q9UPN6 1271 aaKnown RBP10.4□□□□□ -0.74
PFDN5-211ENST00000550846 BRPF1P55201 1214 aaPredicted RBP10.39□□□□□ -0.75
PFDN5-211ENST00000550846 RPS8P62241 208 aaKnown RBP10.39□□□□□ -0.75
PFDN5-211ENST00000550846 DGKZQ13574 1117 aa10.39□□□□□ -0.75
PFDN5-211ENST00000550846 KIF4BQ2VIQ3 1234 aa10.39□□□□□ -0.75
PFDN5-211ENST00000550846 DCPSQ96C86 337 aaKnown RBP10.39□□□□□ -0.75
PFDN5-211ENST00000550846 EYA3Q99504 573 aa10.39□□□□□ -0.75
PFDN5-211ENST00000550846 GBA2Q9HCG7 927 aaPredicted RBP10.39□□□□□ -0.75
PFDN5-211ENST00000550846 APAF1O14727 1248 aa10.38□□□□□ -0.75
PFDN5-211ENST00000550846 HOXB7P09629 217 aa10.38□□□□□ -0.75
PFDN5-211ENST00000550846 NOGQ13253 232 aa10.38□□□□□ -0.75
PFDN5-211ENST00000550846 C2orf69Q8N8R5 385 aa10.38□□□□□ -0.75
PFDN5-211ENST00000550846 DPF2Q92785 391 aa10.38□□□□□ -0.75
PFDN5-211ENST00000550846 ZC3H12CQ9C0D7 883 aaKnown RBP10.38□□□□□ -0.75
PFDN5-211ENST00000550846 WTIPA6NIX2 430 aaPredicted RBP10.37□□□□□ -0.75
PFDN5-211ENST00000550846 CA12O43570 354 aa10.37□□□□□ -0.75
PFDN5-211ENST00000550846 RPS12P25398 132 aaKnown RBP10.37□□□□□ -0.75
PFDN5-211ENST00000550846 ZNF157P51786 506 aaPredicted RBP10.37□□□□□ -0.75
PFDN5-211ENST00000550846 MLLT1Q03111 559 aaPredicted RBP10.37□□□□□ -0.75
PFDN5-211ENST00000550846 RGMBQ6NW40 437 aa10.37□□□□□ -0.75
PFDN5-211ENST00000550846 SULF1Q8IWU6 871 aa10.37□□□□□ -0.75
PFDN5-211ENST00000550846 ZBTB38Q8NAP3 1195 aaPredicted RBP10.37□□□□□ -0.75
PFDN5-211ENST00000550846 FBXW7Q969H0 707 aa10.37□□□□□ -0.75
PFDN5-211ENST00000550846 HHIPL1Q96JK4 782 aa10.37□□□□□ -0.75
PFDN5-211ENST00000550846 GGA1Q9UJY5 639 aa10.37□□□□□ -0.75
PFDN5-211ENST00000550846 CASP8AP2Q9UKL3 1982 aa10.36□□□□□ -0.75
PFDN5-211ENST00000550846 FAM155AB1AL88 458 aaPredicted RBP10.36□□□□□ -0.75
PFDN5-211ENST00000550846 TRPA1O75762 1119 aa10.36□□□□□ -0.75
PFDN5-211ENST00000550846 KIF23Q02241 960 aaPredicted RBP10.36□□□□□ -0.75
PFDN5-211ENST00000550846 CCDC152Q4G0S7 254 aa10.36□□□□□ -0.75
PFDN5-211ENST00000550846 ANGEL2Q5VTE6 544 aaKnown RBP10.36□□□□□ -0.75
PFDN5-211ENST00000550846 C8orf58Q8NAV2 365 aa10.36□□□□□ -0.75
PFDN5-211ENST00000550846 CDCA5Q96FF9 252 aa10.36□□□□□ -0.75
PFDN5-211ENST00000550846 SCN9AQ15858 1988 aa10.35□□□□□ -0.75
PFDN5-211ENST00000550846 VIL1P09327 827 aaKnown RBP10.35□□□□□ -0.75
PFDN5-211ENST00000550846 TRIM28Q13263 835 aaKnown RBP10.35□□□□□ -0.75
PFDN5-211ENST00000550846 SCARF1Q14162 830 aa10.35□□□□□ -0.75
PFDN5-211ENST00000550846 PRAMEF18Q5VWM3 479 aa10.35□□□□□ -0.75
PFDN5-211ENST00000550846 MOB2Q70IA6 237 aa10.35□□□□□ -0.75
PFDN5-211ENST00000550846 MXD3Q9BW11 206 aa10.35□□□□□ -0.75
PFDN5-211ENST00000550846 CWC25Q9NXE8 425 aaPredicted RBP10.35□□□□□ -0.75
PFDN5-211ENST00000550846 MAP3K2Q9Y2U5 619 aa10.35□□□□□ -0.75
PFDN5-211ENST00000550846 PDE8AO60658 829 aa10.34□□□□□ -0.75
PFDN5-211ENST00000550846 PCCAP05165 728 aaPredicted RBP10.34□□□□□ -0.75
PFDN5-211ENST00000550846 ZNF853P0CG23 659 aa10.34□□□□□ -0.75
PFDN5-211ENST00000550846 SOX10P56693 466 aa10.34□□□□□ -0.75
PFDN5-211ENST00000550846 GNAI1P63096 354 aa10.34□□□□□ -0.75
PFDN5-211ENST00000550846 RSBN1LQ6PCB5 846 aaPredicted RBP10.34□□□□□ -0.75
PFDN5-211ENST00000550846 ANKRD18AQ8IVF6 992 aa10.34□□□□□ -0.75
PFDN5-211ENST00000550846 TSPYL6Q8N831 410 aa10.34□□□□□ -0.75
PFDN5-211ENST00000550846 CCDC191Q8NCU4 936 aa10.34□□□□□ -0.75
PFDN5-211ENST00000550846 TSR2Q969E8 191 aaKnown RBP10.34□□□□□ -0.75
PFDN5-211ENST00000550846 IFT57Q9NWB7 429 aa10.34□□□□□ -0.75
PFDN5-211ENST00000550846 RNF186Q9NXI6 227 aa10.34□□□□□ -0.75
PFDN5-211ENST00000550846 PODXL2Q9NZ53 605 aa10.34□□□□□ -0.75
PFDN5-211ENST00000550846 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.34□□□□□ -0.75
PFDN5-211ENST00000550846 XDHP47989 1333 aa10.33□□□□□ -0.76
PFDN5-211ENST00000550846 SLC10A3P09131 477 aa10.33□□□□□ -0.76
PFDN5-211ENST00000550846 CTSWP56202 376 aa10.33□□□□□ -0.76
PFDN5-211ENST00000550846 MKRN3Q13064 507 aaKnown RBP10.33□□□□□ -0.76
PFDN5-211ENST00000550846 CWF19L2Q2TBE0 894 aaKnown RBP10.33□□□□□ -0.76
PFDN5-211ENST00000550846 METTL22Q9BUU2 404 aaPredicted RBP10.33□□□□□ -0.76
PFDN5-211ENST00000550846 PRKRIP1Q9H875 184 aaPredicted RBP10.33□□□□□ -0.76
PFDN5-211ENST00000550846 MYOZ2Q9NPC6 264 aa10.33□□□□□ -0.76
PFDN5-211ENST00000550846 DDX58O95786 925 aaKnown RBP10.32□□□□□ -0.76
PFDN5-211ENST00000550846 USP17L8P0C7I0 530 aa10.32□□□□□ -0.76
PFDN5-211ENST00000550846 ZNF280AP59817 542 aaPredicted RBP10.32□□□□□ -0.76
PFDN5-211ENST00000550846 TTLL12Q14166 644 aaPredicted RBP10.32□□□□□ -0.76
PFDN5-211ENST00000550846 RASAL3Q86YV0 1011 aa10.32□□□□□ -0.76
PFDN5-211ENST00000550846 CCDC102AQ96A19 550 aa10.32□□□□□ -0.76
PFDN5-211ENST00000550846 CSRNP1Q96S65 589 aa10.32□□□□□ -0.76
PFDN5-211ENST00000550846 GREM2Q9H772 168 aa10.32□□□□□ -0.76
PFDN5-211ENST00000550846 POLR2AP24928 1970 aaKnown RBP10.32□□□□□ -0.76
PFDN5-211ENST00000550846 SPEF2Q9C093 1822 aa10.31□□□□□ -0.76
PFDN5-211ENST00000550846 PI4KAP2A4QPH2 592 aa10.31□□□□□ -0.76
PFDN5-211ENST00000550846 USP17L3A6NCW0 530 aa10.31□□□□□ -0.76
PFDN5-211ENST00000550846 USP17L4A6NCW7 530 aa10.31□□□□□ -0.76
PFDN5-211ENST00000550846 UBE2Q2LH0YL09 131 aa10.31□□□□□ -0.76
PFDN5-211ENST00000550846 SASH1O94885 1247 aa10.31□□□□□ -0.76
PFDN5-211ENST00000550846 IGKV5-2P06315 115 aa10.31□□□□□ -0.76
PFDN5-211ENST00000550846 HSP90B1P14625 803 aaKnown RBP10.31□□□□□ -0.76
PFDN5-211ENST00000550846 ATP2B4P23634 1241 aa10.31□□□□□ -0.76
PFDN5-211ENST00000550846 KLRK1P26718 216 aa10.31□□□□□ -0.76
PFDN5-211ENST00000550846 CALD1Q05682 793 aaKnown RBP10.31□□□□□ -0.76
PFDN5-211ENST00000550846 PRKG1Q13976 671 aa10.31□□□□□ -0.76
PFDN5-211ENST00000550846 NBPF9Q3BBW0 867 aa10.31□□□□□ -0.76
PFDN5-211ENST00000550846 CCDC30Q5VVM6 783 aa10.31□□□□□ -0.76
PFDN5-211ENST00000550846 USP17L1Q7RTZ2 530 aa10.31□□□□□ -0.76
PFDN5-211ENST00000550846 UBE3BQ7Z3V4 1068 aa10.31□□□□□ -0.76
PFDN5-211ENST00000550846 PI4KAP1Q8N8J0 262 aa10.31□□□□□ -0.76
PFDN5-211ENST00000550846 AGBL3Q8NEM8 1001 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms