RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 CWF19L2Q2TBE0 894 aaKnown RBP25.4■■□□□ 1.66
GCN1-207ENST00000550471 TAF1P21675 1872 aa25.4■■□□□ 1.66
GCN1-207ENST00000550471 CNTNAP1P78357 1384 aa25.4■■□□□ 1.66
GCN1-207ENST00000550471 UFL1O94874 794 aa25.39■■□□□ 1.66
GCN1-207ENST00000550471 UBE3BQ7Z3V4 1068 aa25.39■■□□□ 1.66
GCN1-207ENST00000550471 PGAP2Q9UHJ9 254 aa25.39■■□□□ 1.66
GCN1-207ENST00000550471 YDJCA8MPS7 323 aa25.38■■□□□ 1.65
GCN1-207ENST00000550471 ECE2O60344 883 aa25.38■■□□□ 1.65
GCN1-207ENST00000550471 IGHMBP2P38935 993 aaKnown RBP25.38■■□□□ 1.65
GCN1-207ENST00000550471 CNOT7Q9UIV1 285 aaKnown RBP25.38■■□□□ 1.65
GCN1-207ENST00000550471 RIMBP2O15034 1052 aa25.37■■□□□ 1.65
GCN1-207ENST00000550471 DBNDD1Q9H9R9 158 aa25.37■■□□□ 1.65
GCN1-207ENST00000550471 LTBP1Q14766 1721 aa25.37■■□□□ 1.65
GCN1-207ENST00000550471 JARID2Q92833 1246 aaPredicted RBP25.36■■□□□ 1.65
GCN1-207ENST00000550471 ZNF521Q96K83 1311 aa25.36■■□□□ 1.65
GCN1-207ENST00000550471 RASSF10A6NK89 507 aa25.35■■□□□ 1.65
GCN1-207ENST00000550471 PSMD14O00487 310 aa25.35■■□□□ 1.65
GCN1-207ENST00000550471 PODNQ7Z5L7 613 aa25.35■■□□□ 1.65
GCN1-207ENST00000550471 MKRN1Q9UHC7 482 aaKnown RBP25.35■■□□□ 1.65
GCN1-207ENST00000550471 MYH3P11055 1940 aa25.34■■□□□ 1.65
GCN1-207ENST00000550471 E9PSI1 815 aa25.34■■□□□ 1.65
GCN1-207ENST00000550471 CSF1RP07333 972 aa25.34■■□□□ 1.65
GCN1-207ENST00000550471 DEFB115Q30KQ5 88 aa25.34■■□□□ 1.65
GCN1-207ENST00000550471 IFFO2Q5TF58 517 aa25.34■■□□□ 1.65
GCN1-207ENST00000550471 CCDC85AQ96PX6 553 aaPredicted RBP25.34■■□□□ 1.65
GCN1-207ENST00000550471 ANKRD2Q9GZV1 360 aa25.34■■□□□ 1.65
GCN1-207ENST00000550471 GREM2Q9H772 168 aa25.34■■□□□ 1.65
GCN1-207ENST00000550471 ZNF609O15014 1411 aa25.33■■□□□ 1.65
GCN1-207ENST00000550471 VIL1P09327 827 aaKnown RBP25.33■■□□□ 1.65
GCN1-207ENST00000550471 CDC37L1Q7L3B6 337 aa25.33■■□□□ 1.65
GCN1-207ENST00000550471 MICALL2Q8IY33 904 aa25.33■■□□□ 1.65
GCN1-207ENST00000550471 SPINK5Q9NQ38 1064 aaPredicted RBP25.33■■□□□ 1.65
GCN1-207ENST00000550471 MINPP1Q9UNW1 487 aa25.33■■□□□ 1.65
GCN1-207ENST00000550471 LEMD3Q9Y2U8 911 aa25.33■■□□□ 1.65
GCN1-207ENST00000550471 MMP14P50281 582 aa25.32■■□□□ 1.64
GCN1-207ENST00000550471 CASP7P55210 303 aa25.32■■□□□ 1.64
GCN1-207ENST00000550471 DOK7Q18PE1 504 aa25.32■■□□□ 1.64
GCN1-207ENST00000550471 AGBL3Q8NEM8 1001 aa25.32■■□□□ 1.64
GCN1-207ENST00000550471 MPHOSPH8Q99549 860 aa25.32■■□□□ 1.64
GCN1-207ENST00000550471 ABT1Q9ULW3 272 aaKnown RBP25.32■■□□□ 1.64
GCN1-207ENST00000550471 MED23Q9ULK4 1368 aa25.31■■□□□ 1.64
GCN1-207ENST00000550471 ALDH1L1O75891 902 aa25.31■■□□□ 1.64
GCN1-207ENST00000550471 BEND3Q5T5X7 828 aa25.31■■□□□ 1.64
GCN1-207ENST00000550471 HSPA1AP0DMV8 641 aaKnown RBP25.3■■□□□ 1.64
GCN1-207ENST00000550471 HSPA1BP0DMV9 641 aaKnown RBP25.3■■□□□ 1.64
GCN1-207ENST00000550471 ITGA6P23229 1130 aa25.3■■□□□ 1.64
GCN1-207ENST00000550471 ECE1P42892 770 aa25.3■■□□□ 1.64
GCN1-207ENST00000550471 ANKRD18BA2A2Z9 1011 aa25.29■■□□□ 1.64
GCN1-207ENST00000550471 CCER2I3L3R5 266 aa25.29■■□□□ 1.64
GCN1-207ENST00000550471 CCT4P50991 539 aaKnown RBP25.29■■□□□ 1.64
GCN1-207ENST00000550471 ZBTB12Q9Y330 459 aaPredicted RBP25.28■■□□□ 1.64
GCN1-207ENST00000550471 COL4A1P02462 1669 aa25.28■■□□□ 1.64
GCN1-207ENST00000550471 VEGFBP49765 207 aa25.27■■□□□ 1.64
GCN1-207ENST00000550471 IFIT5Q13325 482 aaKnown RBP25.27■■□□□ 1.64
GCN1-207ENST00000550471 HHIPL1Q96JK4 782 aa25.27■■□□□ 1.64
GCN1-207ENST00000550471 SRCIN1Q9C0H9 1055 aa25.27■■□□□ 1.64
GCN1-207ENST00000550471 COA1Q9GZY4 146 aa25.27■■□□□ 1.64
GCN1-207ENST00000550471 USP17L3A6NCW0 530 aa25.26■■□□□ 1.63
GCN1-207ENST00000550471 USP17L4A6NCW7 530 aa25.26■■□□□ 1.63
GCN1-207ENST00000550471 GRM8O00222 908 aa25.26■■□□□ 1.63
GCN1-207ENST00000550471 HIRAP54198 1017 aaPredicted RBP25.26■■□□□ 1.63
GCN1-207ENST00000550471 RSBN1LQ6PCB5 846 aaPredicted RBP25.26■■□□□ 1.63
GCN1-207ENST00000550471 USP17L1Q7RTZ2 530 aa25.26■■□□□ 1.63
GCN1-207ENST00000550471 AIDAQ96BJ3 306 aa25.26■■□□□ 1.63
GCN1-207ENST00000550471 C9orf78Q9NZ63 289 aaPredicted RBP25.26■■□□□ 1.63
GCN1-207ENST00000550471 TLL2Q9Y6L7 1015 aa25.26■■□□□ 1.63
GCN1-207ENST00000550471 MYO3BQ8WXR4 1341 aa25.26■■□□□ 1.63
GCN1-207ENST00000550471 F6X3S4 739 aa25.25■■□□□ 1.63
GCN1-207ENST00000550471 MAP2K1Q02750 393 aaPredicted RBP25.25■■□□□ 1.63
GCN1-207ENST00000550471 FAM161AQ3B820 660 aa25.25■■□□□ 1.63
GCN1-207ENST00000550471 TRPM4Q8TD43 1214 aa25.25■■□□□ 1.63
GCN1-207ENST00000550471 DCPSQ96C86 337 aaKnown RBP25.25■■□□□ 1.63
GCN1-207ENST00000550471 PTPRCP08575 1304 aa25.25■■□□□ 1.63
GCN1-207ENST00000550471 TRPM7Q96QT4 1865 aa25.24■■□□□ 1.63
GCN1-207ENST00000550471 GPR101Q96P66 508 aaPredicted RBP25.24■■□□□ 1.63
GCN1-207ENST00000550471 ZNF804BA4D1E1 1349 aa25.23■■□□□ 1.63
GCN1-207ENST00000550471 WDR33Q9C0J8 1336 aaKnown RBP25.23■■□□□ 1.63
GCN1-207ENST00000550471 CELF2O95319 508 aaKnown RBP25.23■■□□□ 1.63
GCN1-207ENST00000550471 CT47B1P0C2W7 299 aaPredicted RBP25.23■■□□□ 1.63
GCN1-207ENST00000550471 ZNF280AP59817 542 aaPredicted RBP25.23■■□□□ 1.63
GCN1-207ENST00000550471 CCDC57Q2TAC2 916 aa25.23■■□□□ 1.63
GCN1-207ENST00000550471 CST9Q5W186 159 aa25.23■■□□□ 1.63
GCN1-207ENST00000550471 TRAF5O00463 557 aa25.22■■□□□ 1.63
GCN1-207ENST00000550471 KCNJ4P48050 445 aa25.22■■□□□ 1.63
GCN1-207ENST00000550471 KIF4BQ2VIQ3 1234 aa25.22■■□□□ 1.63
GCN1-207ENST00000550471 SAMD7Q7Z3H4 446 aa25.22■■□□□ 1.63
GCN1-207ENST00000550471 GLIS2Q9BZE0 524 aaPredicted RBP25.22■■□□□ 1.63
GCN1-207ENST00000550471 KCNQ5Q9NR82 932 aa25.22■■□□□ 1.63
GCN1-207ENST00000550471 USP17L8P0C7I0 530 aa25.21■■□□□ 1.63
GCN1-207ENST00000550471 FOXO4P98177 505 aa25.21■■□□□ 1.63
GCN1-207ENST00000550471 SLFN5Q08AF3 891 aa25.21■■□□□ 1.63
GCN1-207ENST00000550471 TBC1D10BQ4KMP7 808 aaPredicted RBP25.21■■□□□ 1.63
GCN1-207ENST00000550471 STRIP1Q5VSL9 837 aa25.21■■□□□ 1.63
GCN1-207ENST00000550471 SLC4A10Q6U841 1118 aa25.21■■□□□ 1.63
GCN1-207ENST00000550471 ALDH1L2Q3SY69 923 aa25.2■■□□□ 1.62
GCN1-207ENST00000550471 C15orf52Q6ZUT6 534 aaKnown RBP25.2■■□□□ 1.62
GCN1-207ENST00000550471 KRT26Q7Z3Y9 468 aa25.2■■□□□ 1.62
GCN1-207ENST00000550471 OGFOD1Q8N543 542 aa25.2■■□□□ 1.62
GCN1-207ENST00000550471 CHMP3Q9Y3E7 222 aa25.2■■□□□ 1.62
GCN1-207ENST00000550471 MAP2K2P36507 400 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms