RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 IGHMBP2P38935 993 aaKnown RBP16.27■□□□□ 0.2
RAB5C-206ENST00000550406 LDHAL6AQ6ZMR3 332 aa16.27■□□□□ 0.2
RAB5C-206ENST00000550406 ATG9AQ7Z3C6 839 aa16.27■□□□□ 0.2
RAB5C-206ENST00000550406 RPAP2Q8IXW5 612 aaPredicted RBP16.27■□□□□ 0.2
RAB5C-206ENST00000550406 PRELPP51888 382 aa16.26■□□□□ 0.19
RAB5C-206ENST00000550406 GPSM2P81274 684 aa16.26■□□□□ 0.19
RAB5C-206ENST00000550406 TAF7LQ5H9L4 462 aa16.26■□□□□ 0.19
RAB5C-206ENST00000550406 MPHOSPH8Q99549 860 aa16.26■□□□□ 0.19
RAB5C-206ENST00000550406 NFKBIEO00221 500 aa16.25■□□□□ 0.19
RAB5C-206ENST00000550406 CHRNDQ07001 517 aa16.25■□□□□ 0.19
RAB5C-206ENST00000550406 CCDC93Q567U6 631 aa16.25■□□□□ 0.19
RAB5C-206ENST00000550406 CC2D2BQ6DHV5 1058 aa16.25■□□□□ 0.19
RAB5C-206ENST00000550406 DICER1Q9UPY3 1922 aaKnown RBP16.25■□□□□ 0.19
RAB5C-206ENST00000550406 EYA2O00167 538 aa16.24■□□□□ 0.19
RAB5C-206ENST00000550406 ARHGAP27Q6ZUM4 889 aa16.24■□□□□ 0.19
RAB5C-206ENST00000550406 HELBQ8NG08 1087 aaPredicted RBP16.24■□□□□ 0.19
RAB5C-206ENST00000550406 SIL1Q9H173 461 aa16.24■□□□□ 0.19
RAB5C-206ENST00000550406 CNNM1Q9NRU3 951 aa16.24■□□□□ 0.19
RAB5C-206ENST00000550406 PODXL2Q9NZ53 605 aa16.24■□□□□ 0.19
RAB5C-206ENST00000550406 POLLQ9UGP5 575 aa16.24■□□□□ 0.19
RAB5C-206ENST00000550406 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.24■□□□□ 0.19
RAB5C-206ENST00000550406 SNAP23O00161 211 aa16.23■□□□□ 0.19
RAB5C-206ENST00000550406 TAF5LO75529 589 aa16.23■□□□□ 0.19
RAB5C-206ENST00000550406 RASSF7Q02833 373 aa16.23■□□□□ 0.19
RAB5C-206ENST00000550406 SOGA3Q5TF21 947 aa16.23■□□□□ 0.19
RAB5C-206ENST00000550406 RTKN2Q8IZC4 609 aa16.23■□□□□ 0.19
RAB5C-206ENST00000550406 MPNDQ8N594 471 aa16.23■□□□□ 0.19
RAB5C-206ENST00000550406 VGLL2Q8N8G2 317 aa16.23■□□□□ 0.19
RAB5C-206ENST00000550406 NSFL1CQ9UNZ2 370 aaKnown RBP16.23■□□□□ 0.19
RAB5C-206ENST00000550406 NOP58Q9Y2X3 529 aaKnown RBP16.23■□□□□ 0.19
RAB5C-206ENST00000550406 GOLGB1Q14789 3259 aaKnown RBP16.22■□□□□ 0.19
RAB5C-206ENST00000550406 CIAO1O76071 339 aa16.22■□□□□ 0.19
RAB5C-206ENST00000550406 AAMPQ13685 434 aa16.22■□□□□ 0.19
RAB5C-206ENST00000550406 RTFDC1Q9BY42 306 aaPredicted RBP16.22■□□□□ 0.19
RAB5C-206ENST00000550406 FBXO3Q9UK99 471 aa16.22■□□□□ 0.19
RAB5C-206ENST00000550406 CHD4Q14839 1912 aa16.21■□□□□ 0.19
RAB5C-206ENST00000550406 GRIN3BO60391 1043 aa16.21■□□□□ 0.19
RAB5C-206ENST00000550406 SASH1O94885 1247 aa16.21■□□□□ 0.19
RAB5C-206ENST00000550406 FKBP4Q02790 459 aaKnown RBP eCLIP16.21■□□□□ 0.19
RAB5C-206ENST00000550406 GRIPAP1Q4V328 841 aa16.21■□□□□ 0.19
RAB5C-206ENST00000550406 DPP8Q6V1X1 898 aaPredicted RBP16.21■□□□□ 0.19
RAB5C-206ENST00000550406 TBC1D16Q8TBP0 767 aa16.21■□□□□ 0.19
RAB5C-206ENST00000550406 GPR101Q96P66 508 aaPredicted RBP16.21■□□□□ 0.19
RAB5C-206ENST00000550406 PSMD1Q99460 953 aa16.21■□□□□ 0.19
RAB5C-206ENST00000550406 COL4A5P29400 1685 aa16.21■□□□□ 0.18
RAB5C-206ENST00000550406 XDHP47989 1333 aa16.2■□□□□ 0.18
RAB5C-206ENST00000550406 MROH5Q6ZUA9 1318 aa16.2■□□□□ 0.18
RAB5C-206ENST00000550406 LTBP3Q9NS15 1303 aa16.2■□□□□ 0.18
RAB5C-206ENST00000550406 SURF6O75683 361 aaKnown RBP16.2■□□□□ 0.18
RAB5C-206ENST00000550406 IL15P40933 162 aaPredicted RBP16.2■□□□□ 0.18
RAB5C-206ENST00000550406 ANKRD2Q9GZV1 360 aa16.2■□□□□ 0.18
RAB5C-206ENST00000550406 ANKIB1Q9P2G1 1089 aa16.2■□□□□ 0.18
RAB5C-206ENST00000550406 IRS2Q9Y4H2 1338 aa16.19■□□□□ 0.18
RAB5C-206ENST00000550406 HMMRO75330 724 aa16.19■□□□□ 0.18
RAB5C-206ENST00000550406 ATP2B4P23634 1241 aa16.19■□□□□ 0.18
RAB5C-206ENST00000550406 G3BP1Q13283 466 aaKnown RBP eCLIP16.19■□□□□ 0.183e-6■■□□□ 13.8
RAB5C-206ENST00000550406 METTL24Q5JXM2 366 aa16.19■□□□□ 0.18
RAB5C-206ENST00000550406 TMX4Q9H1E5 349 aaPredicted RBP16.19■□□□□ 0.18
RAB5C-206ENST00000550406 TAOK3Q9H2K8 898 aa16.19■□□□□ 0.18
RAB5C-206ENST00000550406 ZNF277Q9NRM2 450 aaPredicted RBP16.19■□□□□ 0.18
RAB5C-206ENST00000550406 GGA1Q9UJY5 639 aa16.19■□□□□ 0.18
RAB5C-206ENST00000550406 EXOC6BQ9Y2D4 811 aa16.19■□□□□ 0.18
RAB5C-206ENST00000550406 UFL1O94874 794 aa16.18■□□□□ 0.18
RAB5C-206ENST00000550406 PDE8BO95263 885 aa16.18■□□□□ 0.18
RAB5C-206ENST00000550406 IGHDP01880 384 aa16.18■□□□□ 0.18
RAB5C-206ENST00000550406 FGFR2P21802 821 aa16.18■□□□□ 0.18
RAB5C-206ENST00000550406 KLRK1P26718 216 aa16.18■□□□□ 0.18
RAB5C-206ENST00000550406 TFCP2Q12800 502 aa16.18■□□□□ 0.18
RAB5C-206ENST00000550406 TXNRD3Q86VQ6 643 aa16.18■□□□□ 0.18
RAB5C-206ENST00000550406 DCTPP1Q9H773 170 aa16.18■□□□□ 0.18
RAB5C-206ENST00000550406 LEMD3Q9Y2U8 911 aa16.18■□□□□ 0.18
RAB5C-206ENST00000550406 ZNF804BA4D1E1 1349 aa16.18■□□□□ 0.18
RAB5C-206ENST00000550406 ARAP2Q8WZ64 1704 aa16.17■□□□□ 0.18
RAB5C-206ENST00000550406 C6orf229H3BNL8 230 aa16.17■□□□□ 0.18
RAB5C-206ENST00000550406 CEP126Q9P2H0 1117 aa16.17■□□□□ 0.18
RAB5C-206ENST00000550406 RIMBP2O15034 1052 aa16.16■□□□□ 0.18
RAB5C-206ENST00000550406 IARSP41252 1262 aaKnown RBP16.16■□□□□ 0.18
RAB5C-206ENST00000550406 HDAC1Q13547 482 aaPredicted RBP16.16■□□□□ 0.18
RAB5C-206ENST00000550406 UBE4AQ14139 1066 aa16.16■□□□□ 0.18
RAB5C-206ENST00000550406 SUPT20HQ8NEM7 779 aa16.16■□□□□ 0.18
RAB5C-206ENST00000550406 SCN9AQ15858 1988 aa16.16■□□□□ 0.18
RAB5C-206ENST00000550406 ZNF646O15015 1829 aaPredicted RBP16.15■□□□□ 0.18
RAB5C-206ENST00000550406 KIAA2012Q0VF49 1180 aa16.15■□□□□ 0.18
RAB5C-206ENST00000550406 AOC3Q16853 763 aa16.15■□□□□ 0.18
RAB5C-206ENST00000550406 C15orf52Q6ZUT6 534 aaKnown RBP16.15■□□□□ 0.18
RAB5C-206ENST00000550406 TIAM2Q8IVF5 1701 aa16.15■□□□□ 0.18
RAB5C-206ENST00000550406 DCAF8L1A6NGE4 600 aa16.14■□□□□ 0.17
RAB5C-206ENST00000550406 LMNB1P20700 586 aa16.14■□□□□ 0.17
RAB5C-206ENST00000550406 TIMM10P62072 90 aa16.14■□□□□ 0.17
RAB5C-206ENST00000550406 WASHC4Q2M389 1173 aa16.14■□□□□ 0.17
RAB5C-206ENST00000550406 C9orf131Q5VYM1 1079 aa16.14■□□□□ 0.17
RAB5C-206ENST00000550406 RHPN1Q8TCX5 695 aa16.14■□□□□ 0.17
RAB5C-206ENST00000550406 VPS33BQ9H267 617 aa16.14■□□□□ 0.17
RAB5C-206ENST00000550406 PSME4Q14997 1843 aa16.14■□□□□ 0.17
RAB5C-206ENST00000550406 MED23Q9ULK4 1368 aa16.13■□□□□ 0.17
RAB5C-206ENST00000550406 UTRNP46939 3433 aa16.13■□□□□ 0.17
RAB5C-206ENST00000550406 PPIP5K2O43314 1243 aa16.13■□□□□ 0.17
RAB5C-206ENST00000550406 OS9Q13438 667 aaPredicted RBP16.13■□□□□ 0.17
RAB5C-206ENST00000550406 PUM3Q15397 648 aaKnown RBP16.13■□□□□ 0.17
RAB5C-206ENST00000550406 EYA3Q99504 573 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms