RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 NDUFB9Q9Y6M9 179 aa12.14□□□□□ -0.47
ERBB3-214ENST00000550070 PHRF1Q9P1Y6 1649 aaKnown RBP12.14□□□□□ -0.47
ERBB3-214ENST00000550070 ZNF75DP51815 510 aa12.14□□□□□ -0.47
ERBB3-214ENST00000550070 CHAF1AQ13111 956 aaPredicted RBP12.14□□□□□ -0.47
ERBB3-214ENST00000550070 RESTQ13127 1097 aa12.14□□□□□ -0.47
ERBB3-214ENST00000550070 PPP4R3BQ5MIZ7 849 aa12.14□□□□□ -0.47
ERBB3-214ENST00000550070 GTF3C6Q969F1 213 aa12.14□□□□□ -0.47
ERBB3-214ENST00000550070 TRIM5Q9C035 493 aa12.14□□□□□ -0.47
ERBB3-214ENST00000550070 OVOS2A0A0G2JMS6 1433 aa12.14□□□□□ -0.47
ERBB3-214ENST00000550070 NEURL1BA8MQ27 555 aa12.13□□□□□ -0.47
ERBB3-214ENST00000550070 ATP2B3Q16720 1220 aa12.13□□□□□ -0.47
ERBB3-214ENST00000550070 DRC7Q8IY82 874 aa12.13□□□□□ -0.47
ERBB3-214ENST00000550070 KCTD17Q8N5Z5 321 aa12.13□□□□□ -0.47
ERBB3-214ENST00000550070 TDRD7Q8NHU6 1098 aaKnown RBP12.13□□□□□ -0.47
ERBB3-214ENST00000550070 BRF1Q92994 677 aa12.13□□□□□ -0.47
ERBB3-214ENST00000550070 NEK1Q96PY6 1258 aa12.13□□□□□ -0.47
ERBB3-214ENST00000550070 DNAJC25Q9H1X3 360 aa12.13□□□□□ -0.47
ERBB3-214ENST00000550070 MTMR7Q9Y216 660 aa12.13□□□□□ -0.47
ERBB3-214ENST00000550070 MRC1P22897 1456 aa12.13□□□□□ -0.47
ERBB3-214ENST00000550070 GCP02774 474 aa12.13□□□□□ -0.47
ERBB3-214ENST00000550070 MYL6BP14649 208 aa12.13□□□□□ -0.47
ERBB3-214ENST00000550070 ZNF165P49910 485 aa12.13□□□□□ -0.47
ERBB3-214ENST00000550070 IRX3P78415 501 aaPredicted RBP12.13□□□□□ -0.47
ERBB3-214ENST00000550070 SLC39A6Q13433 755 aa12.13□□□□□ -0.47
ERBB3-214ENST00000550070 CCDC129Q6ZRS4 1044 aa12.13□□□□□ -0.47
ERBB3-214ENST00000550070 Q6ZUG5 572 aa12.13□□□□□ -0.47
ERBB3-214ENST00000550070 ARHGEF25Q86VW2 580 aa12.13□□□□□ -0.47
ERBB3-214ENST00000550070 BICD2Q8TD16 824 aa12.13□□□□□ -0.47
ERBB3-214ENST00000550070 ANKRD24Q8TF21 1146 aa12.13□□□□□ -0.47
ERBB3-214ENST00000550070 DBNLQ9UJU6 430 aaKnown RBP12.13□□□□□ -0.47
ERBB3-214ENST00000550070 CTIFO43310 598 aaKnown RBP12.12□□□□□ -0.47
ERBB3-214ENST00000550070 CBX1P83916 185 aa12.12□□□□□ -0.47
ERBB3-214ENST00000550070 GCKRQ14397 625 aa12.12□□□□□ -0.47
ERBB3-214ENST00000550070 SEC62Q99442 399 aaKnown RBP12.12□□□□□ -0.47
ERBB3-214ENST00000550070 ATP5JP18859 108 aa12.12□□□□□ -0.47
ERBB3-214ENST00000550070 KRT32Q14532 448 aa12.12□□□□□ -0.47
ERBB3-214ENST00000550070 ZSCAN25Q6NSZ9 544 aa12.12□□□□□ -0.47
ERBB3-214ENST00000550070 ANKRD7Q92527 254 aa12.12□□□□□ -0.47
ERBB3-214ENST00000550070 MYD88Q99836 296 aa12.12□□□□□ -0.47
ERBB3-214ENST00000550070 TFCP2Q12800 502 aa12.11□□□□□ -0.47
ERBB3-214ENST00000550070 XAGE3Q8WTP9 111 aa12.11□□□□□ -0.47
ERBB3-214ENST00000550070 AXIN2Q9Y2T1 843 aa12.11□□□□□ -0.47
ERBB3-214ENST00000550070 ZNF609O15014 1411 aa12.11□□□□□ -0.47
ERBB3-214ENST00000550070 CYP21A2P08686 494 aa12.11□□□□□ -0.47
ERBB3-214ENST00000550070 RFX5P48382 616 aaPredicted RBP12.11□□□□□ -0.47
ERBB3-214ENST00000550070 TNNI3KQ59H18 835 aa12.11□□□□□ -0.47
ERBB3-214ENST00000550070 COPS6Q7L5N1 327 aa12.11□□□□□ -0.47
ERBB3-214ENST00000550070 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.11□□□□□ -0.47
ERBB3-214ENST00000550070 PDCL2Q8N4E4 241 aa12.11□□□□□ -0.47
ERBB3-214ENST00000550070 LRRC2Q9BYS8 371 aa12.11□□□□□ -0.47
ERBB3-214ENST00000550070 FPGT-TNNI3KV9GXZ4 949 aa12.11□□□□□ -0.47
ERBB3-214ENST00000550070 C5P01031 1676 aa12.11□□□□□ -0.47
ERBB3-214ENST00000550070 CEBPZQ03701 1054 aaKnown RBP12.1□□□□□ -0.47
ERBB3-214ENST00000550070 PTPN12Q05209 780 aaKnown RBP12.1□□□□□ -0.47
ERBB3-214ENST00000550070 NEXNQ0ZGT2 675 aa12.1□□□□□ -0.47
ERBB3-214ENST00000550070 SCRN1Q12765 414 aa12.1□□□□□ -0.47
ERBB3-214ENST00000550070 CCDC144BQ3MJ40 725 aa12.1□□□□□ -0.47
ERBB3-214ENST00000550070 CCDC144CPQ8IYA2 1237 aa12.1□□□□□ -0.47
ERBB3-214ENST00000550070 C16orf45Q96MC5 204 aaPredicted RBP12.1□□□□□ -0.47
ERBB3-214ENST00000550070 METTL22Q9BUU2 404 aaPredicted RBP12.1□□□□□ -0.47
ERBB3-214ENST00000550070 COPRSQ9NQ92 184 aa12.1□□□□□ -0.47
ERBB3-214ENST00000550070 TMEM51Q9NW97 253 aa12.1□□□□□ -0.47
ERBB3-214ENST00000550070 H3BQV1 296 aa12.1□□□□□ -0.47
ERBB3-214ENST00000550070 APPP05067 770 aa12.1□□□□□ -0.47
ERBB3-214ENST00000550070 ZSCAN20P17040 1043 aaPredicted RBP12.1□□□□□ -0.47
ERBB3-214ENST00000550070 IFFO2Q5TF58 517 aa12.1□□□□□ -0.47
ERBB3-214ENST00000550070 ZNF790Q6PG37 636 aa12.1□□□□□ -0.47
ERBB3-214ENST00000550070 CACTINQ8WUQ7 758 aaKnown RBP12.1□□□□□ -0.47
ERBB3-214ENST00000550070 LMTK3Q96Q04 1460 aa12.1□□□□□ -0.47
ERBB3-214ENST00000550070 MYCNP04198 464 aaPredicted RBP12.1□□□□□ -0.47
ERBB3-214ENST00000550070 ADD1P35611 737 aaKnown RBP12.1□□□□□ -0.47
ERBB3-214ENST00000550070 ZSCAN16Q9H4T2 348 aaPredicted RBP12.1□□□□□ -0.47
ERBB3-214ENST00000550070 CLIP2Q9UDT6 1046 aa12.1□□□□□ -0.47
ERBB3-214ENST00000550070 ADAMTS7Q9UKP4 1686 aa12.09□□□□□ -0.47
ERBB3-214ENST00000550070 IQCB1Q15051 598 aa12.09□□□□□ -0.47
ERBB3-214ENST00000550070 AXDND1Q5T1B0 1012 aaPredicted RBP12.09□□□□□ -0.47
ERBB3-214ENST00000550070 C11orf57Q6ZUT1 292 aaPredicted RBP12.09□□□□□ -0.47
ERBB3-214ENST00000550070 STOX1Q6ZVD7 989 aa12.09□□□□□ -0.47
ERBB3-214ENST00000550070 SMARCC2Q8TAQ2 1214 aa12.09□□□□□ -0.47
ERBB3-214ENST00000550070 DBNDD2Q9BQY9 259 aa12.09□□□□□ -0.47
ERBB3-214ENST00000550070 U3KPZ7 1027 aaPredicted RBP12.09□□□□□ -0.47
ERBB3-214ENST00000550070 LAMA4Q16363 1823 aa12.09□□□□□ -0.47
ERBB3-214ENST00000550070 PIP4K2AP48426 406 aaPredicted RBP12.09□□□□□ -0.47
ERBB3-214ENST00000550070 MCMDC2Q4G0Z9 681 aa12.09□□□□□ -0.47
ERBB3-214ENST00000550070 FTOQ9C0B1 505 aaKnown RBP eCLIP12.09□□□□□ -0.47
ERBB3-214ENST00000550070 CFAP45Q9UL16 551 aa12.09□□□□□ -0.47
ERBB3-214ENST00000550070 MYH15Q9Y2K3 1946 aa12.08□□□□□ -0.48
ERBB3-214ENST00000550070 SPDYE4A6NLX3 237 aa12.08□□□□□ -0.48
ERBB3-214ENST00000550070 TNNT1P13805 278 aa12.08□□□□□ -0.48
ERBB3-214ENST00000550070 U2AF2P26368 475 aaKnown RBP eCLIP12.08□□□□□ -0.482e-13■□□□□ 10.8
ERBB3-214ENST00000550070 FOSBP53539 338 aa12.08□□□□□ -0.48
ERBB3-214ENST00000550070 DMTNQ08495 405 aa12.08□□□□□ -0.48
ERBB3-214ENST00000550070 LMOD2Q6P5Q4 547 aa12.08□□□□□ -0.48
ERBB3-214ENST00000550070 DDX17Q92841 729 aaKnown RBP12.08□□□□□ -0.48
ERBB3-214ENST00000550070 ORAI2Q96SN7 254 aa12.08□□□□□ -0.48
ERBB3-214ENST00000550070 CAMTA1Q9Y6Y1 1673 aa12.08□□□□□ -0.48
ERBB3-214ENST00000550070 CTDNEP1O95476 244 aa12.08□□□□□ -0.48
ERBB3-214ENST00000550070 NCBP1Q09161 790 aaKnown RBP12.08□□□□□ -0.48
ERBB3-214ENST00000550070 SLFNL1Q499Z3 407 aa12.08□□□□□ -0.48
ERBB3-214ENST00000550070 ANKRD13DQ6ZTN6 518 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms