RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 CASP7P55210 303 aa23.76■■□□□ 1.39
CHMP1A-203ENST00000547614 BCL2L13Q9BXK5 485 aa23.76■■□□□ 1.39
CHMP1A-203ENST00000547614 GREM2Q9H772 168 aa23.76■■□□□ 1.39
CHMP1A-203ENST00000547614 DBNDD1Q9H9R9 158 aa23.76■■□□□ 1.39
CHMP1A-203ENST00000547614 MYH3P11055 1940 aa23.75■■□□□ 1.39
CHMP1A-203ENST00000547614 TMEM88BA6NKF7 163 aa23.75■■□□□ 1.39
CHMP1A-203ENST00000547614 UFL1O94874 794 aa23.75■■□□□ 1.39
CHMP1A-203ENST00000547614 BSDC1Q9NW68 430 aaPredicted RBP23.75■■□□□ 1.39
CHMP1A-203ENST00000547614 XDHP47989 1333 aa23.75■■□□□ 1.39
CHMP1A-203ENST00000547614 ECE2O60344 883 aa23.74■■□□□ 1.39
CHMP1A-203ENST00000547614 DPF2Q92785 391 aa23.74■■□□□ 1.39
CHMP1A-203ENST00000547614 CSF1RP07333 972 aa23.73■■□□□ 1.39
CHMP1A-203ENST00000547614 BEND3Q5T5X7 828 aa23.73■■□□□ 1.39
CHMP1A-203ENST00000547614 CNOT7Q9UIV1 285 aaKnown RBP23.73■■□□□ 1.39
CHMP1A-203ENST00000547614 E9PSI1 815 aa23.72■■□□□ 1.39
CHMP1A-203ENST00000547614 F6X3S4 739 aa23.72■■□□□ 1.39
CHMP1A-203ENST00000547614 PSMD14O00487 310 aa23.72■■□□□ 1.39
CHMP1A-203ENST00000547614 ATP2B4P23634 1241 aa23.72■■□□□ 1.39
CHMP1A-203ENST00000547614 DOK7Q18PE1 504 aa23.72■■□□□ 1.39
CHMP1A-203ENST00000547614 MINPP1Q9UNW1 487 aa23.72■■□□□ 1.39
CHMP1A-203ENST00000547614 H7C1D1 291 aa23.71■■□□□ 1.39
CHMP1A-203ENST00000547614 CCER2I3L3R5 266 aa23.71■■□□□ 1.39
CHMP1A-203ENST00000547614 RPS12P25398 132 aaKnown RBP23.71■■□□□ 1.39
CHMP1A-203ENST00000547614 ZC3H15Q8WU90 426 aaKnown RBP23.71■■□□□ 1.39
CHMP1A-203ENST00000547614 GPR101Q96P66 508 aaPredicted RBP23.71■■□□□ 1.39
CHMP1A-203ENST00000547614 PGAP2Q9UHJ9 254 aa23.71■■□□□ 1.39
CHMP1A-203ENST00000547614 G3V3G9 751 aa23.7■■□□□ 1.38
CHMP1A-203ENST00000547614 DCAF8Q5TAQ9 597 aa23.7■■□□□ 1.38
CHMP1A-203ENST00000547614 ITGA6P23229 1130 aa23.69■■□□□ 1.38
CHMP1A-203ENST00000547614 IGHMBP2P38935 993 aaKnown RBP23.69■■□□□ 1.38
CHMP1A-203ENST00000547614 KCNQ5Q9NR82 932 aa23.69■■□□□ 1.38
CHMP1A-203ENST00000547614 MKRN1Q9UHC7 482 aaKnown RBP23.69■■□□□ 1.38
CHMP1A-203ENST00000547614 ZBTB12Q9Y330 459 aaPredicted RBP23.69■■□□□ 1.38
CHMP1A-203ENST00000547614 CNTNAP1P78357 1384 aa23.68■■□□□ 1.38
CHMP1A-203ENST00000547614 VIL1P09327 827 aaKnown RBP23.68■■□□□ 1.38
CHMP1A-203ENST00000547614 SLFN5Q08AF3 891 aa23.68■■□□□ 1.38
CHMP1A-203ENST00000547614 MICALL2Q8IY33 904 aa23.68■■□□□ 1.38
CHMP1A-203ENST00000547614 PCNTO95613 3336 aa23.68■■□□□ 1.38
CHMP1A-203ENST00000547614 ALDH1L1O75891 902 aa23.67■■□□□ 1.38
CHMP1A-203ENST00000547614 HIRAP54198 1017 aaPredicted RBP23.67■■□□□ 1.38
CHMP1A-203ENST00000547614 FAM161AQ3B820 660 aa23.67■■□□□ 1.38
CHMP1A-203ENST00000547614 CCT4P50991 539 aaKnown RBP23.66■■□□□ 1.38
CHMP1A-203ENST00000547614 PODNQ7Z5L7 613 aa23.66■■□□□ 1.38
CHMP1A-203ENST00000547614 MPHOSPH8Q99549 860 aa23.66■■□□□ 1.38
CHMP1A-203ENST00000547614 GRM8O00222 908 aa23.65■■□□□ 1.38
CHMP1A-203ENST00000547614 FOXO4P98177 505 aa23.65■■□□□ 1.38
CHMP1A-203ENST00000547614 TRPM4Q8TD43 1214 aa23.65■■□□□ 1.38
CHMP1A-203ENST00000547614 SRCIN1Q9C0H9 1055 aa23.65■■□□□ 1.38
CHMP1A-203ENST00000547614 ANKRD2Q9GZV1 360 aa23.65■■□□□ 1.38
CHMP1A-203ENST00000547614 LEMD3Q9Y2U8 911 aa23.65■■□□□ 1.38
CHMP1A-203ENST00000547614 MED23Q9ULK4 1368 aa23.65■■□□□ 1.38
CHMP1A-203ENST00000547614 SHTN1A0MZ66 631 aa23.64■■□□□ 1.37
CHMP1A-203ENST00000547614 ANKRD18BA2A2Z9 1011 aa23.64■■□□□ 1.37
CHMP1A-203ENST00000547614 RASSF10A6NK89 507 aa23.64■■□□□ 1.37
CHMP1A-203ENST00000547614 MRPL50Q8N5N7 158 aaKnown RBP23.64■■□□□ 1.37
CHMP1A-203ENST00000547614 C9orf78Q9NZ63 289 aaPredicted RBP23.64■■□□□ 1.37
CHMP1A-203ENST00000547614 SCN9AQ15858 1988 aa23.63■■□□□ 1.37
CHMP1A-203ENST00000547614 ZNF609O15014 1411 aa23.63■■□□□ 1.37
CHMP1A-203ENST00000547614 DEFB115Q30KQ5 88 aa23.63■■□□□ 1.37
CHMP1A-203ENST00000547614 SLC4A10Q6U841 1118 aa23.63■■□□□ 1.37
CHMP1A-203ENST00000547614 AGBL3Q8NEM8 1001 aa23.63■■□□□ 1.37
CHMP1A-203ENST00000547614 WTIPA6NIX2 430 aaPredicted RBP23.62■■□□□ 1.37
CHMP1A-203ENST00000547614 TRAF5O00463 557 aa23.62■■□□□ 1.37
CHMP1A-203ENST00000547614 FMR1Q06787 632 aaKnown RBP eCLIP23.62■■□□□ 1.37
CHMP1A-203ENST00000547614 IFIT5Q13325 482 aaKnown RBP23.62■■□□□ 1.37
CHMP1A-203ENST00000547614 CST9Q5W186 159 aa23.62■■□□□ 1.37
CHMP1A-203ENST00000547614 CDC37L1Q7L3B6 337 aa23.62■■□□□ 1.37
CHMP1A-203ENST00000547614 SAMD7Q7Z3H4 446 aa23.62■■□□□ 1.37
CHMP1A-203ENST00000547614 PTPRCP08575 1304 aa23.61■■□□□ 1.37
CHMP1A-203ENST00000547614 VEGFBP49765 207 aa23.61■■□□□ 1.37
CHMP1A-203ENST00000547614 RSBN1LQ6PCB5 846 aaPredicted RBP23.61■■□□□ 1.37
CHMP1A-203ENST00000547614 LMBR1LQ6UX01 489 aa23.61■■□□□ 1.37
CHMP1A-203ENST00000547614 TRMT2AQ8IZ69 625 aaKnown RBP23.61■■□□□ 1.37
CHMP1A-203ENST00000547614 ABT1Q9ULW3 272 aaKnown RBP23.61■■□□□ 1.37
CHMP1A-203ENST00000547614 SPEF2Q9C093 1822 aa23.61■■□□□ 1.37
CHMP1A-203ENST00000547614 USP17L3A6NCW0 530 aa23.6■■□□□ 1.37
CHMP1A-203ENST00000547614 USP17L4A6NCW7 530 aa23.6■■□□□ 1.37
CHMP1A-203ENST00000547614 HSPA1AP0DMV8 641 aaKnown RBP23.6■■□□□ 1.37
CHMP1A-203ENST00000547614 HSPA1BP0DMV9 641 aaKnown RBP23.6■■□□□ 1.37
CHMP1A-203ENST00000547614 USP17L1Q7RTZ2 530 aa23.6■■□□□ 1.37
CHMP1A-203ENST00000547614 SSH1Q8WYL5 1049 aa23.6■■□□□ 1.37
CHMP1A-203ENST00000547614 CDCA7LQ96GN5 454 aa23.6■■□□□ 1.37
CHMP1A-203ENST00000547614 GLIS2Q9BZE0 524 aaPredicted RBP23.6■■□□□ 1.37
CHMP1A-203ENST00000547614 COA1Q9GZY4 146 aa23.6■■□□□ 1.37
CHMP1A-203ENST00000547614 TRPM7Q96QT4 1865 aa23.6■■□□□ 1.37
CHMP1A-203ENST00000547614 ZNF804BA4D1E1 1349 aa23.59■■□□□ 1.37
CHMP1A-203ENST00000547614 CHRNDQ07001 517 aa23.59■■□□□ 1.37
CHMP1A-203ENST00000547614 ALDH1L2Q3SY69 923 aa23.59■■□□□ 1.37
CHMP1A-203ENST00000547614 TBC1D10BQ4KMP7 808 aaPredicted RBP23.59■■□□□ 1.37
CHMP1A-203ENST00000547614 GMLQ99445 158 aa23.59■■□□□ 1.37
CHMP1A-203ENST00000547614 EGFRP00533 1210 aa23.58■■□□□ 1.37
CHMP1A-203ENST00000547614 ZNF280AP59817 542 aaPredicted RBP23.58■■□□□ 1.37
CHMP1A-203ENST00000547614 CCDC57Q2TAC2 916 aa23.58■■□□□ 1.37
CHMP1A-203ENST00000547614 EPHA10Q5JZY3 1008 aa23.58■■□□□ 1.37
CHMP1A-203ENST00000547614 CHMP3Q9Y3E7 222 aa23.58■■□□□ 1.37
CHMP1A-203ENST00000547614 PSME4Q14997 1843 aa23.58■■□□□ 1.37
CHMP1A-203ENST00000547614 UTYO14607 1347 aa23.58■■□□□ 1.36
CHMP1A-203ENST00000547614 CT47B1P0C2W7 299 aaPredicted RBP23.57■■□□□ 1.36
CHMP1A-203ENST00000547614 RBM26Q5T8P6 1007 aaKnown RBP23.57■■□□□ 1.36
CHMP1A-203ENST00000547614 TXNRD3Q86VQ6 643 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms