RNA–Protein interactions for RNA: ENST00000546443.5

CALCOCO1-203, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-203ENST00000546443 UPF3BQ9BZI7 483 aaKnown RBP18.36■□□□□ 0.53
CALCOCO1-203ENST00000546443 TM6SF1Q9BZW5 370 aa18.36■□□□□ 0.53
CALCOCO1-203ENST00000546443 CWC22Q9HCG8 908 aaKnown RBP18.36■□□□□ 0.53
CALCOCO1-203ENST00000546443 TRPC5Q9UL62 973 aaPredicted RBP18.36■□□□□ 0.53
CALCOCO1-203ENST00000546443 ZNF652Q9Y2D9 606 aa18.36■□□□□ 0.53
CALCOCO1-203ENST00000546443 COL24A1Q17RW2 1714 aa18.36■□□□□ 0.53
CALCOCO1-203ENST00000546443 AKAP11Q9UKA4 1901 aa18.36■□□□□ 0.53
CALCOCO1-203ENST00000546443 HCLS1P14317 486 aaPredicted RBP18.35■□□□□ 0.53
CALCOCO1-203ENST00000546443 MCM4P33991 863 aa18.35■□□□□ 0.53
CALCOCO1-203ENST00000546443 KCNQ4P56696 695 aa18.35■□□□□ 0.53
CALCOCO1-203ENST00000546443 ATP2B3Q16720 1220 aa18.35■□□□□ 0.53
CALCOCO1-203ENST00000546443 METTL24Q5JXM2 366 aa18.35■□□□□ 0.53
CALCOCO1-203ENST00000546443 PRPF40BQ6NWY9 871 aaKnown RBP18.35■□□□□ 0.53
CALCOCO1-203ENST00000546443 GOLIM4O00461 696 aa18.34■□□□□ 0.53
CALCOCO1-203ENST00000546443 TAF5LO75529 589 aa18.34■□□□□ 0.53
CALCOCO1-203ENST00000546443 RPS6KA4O75676 772 aa18.34■□□□□ 0.53
CALCOCO1-203ENST00000546443 CCDC158Q5M9N0 1113 aa18.34■□□□□ 0.53
CALCOCO1-203ENST00000546443 FAM182BQ5T319 152 aa18.34■□□□□ 0.53
CALCOCO1-203ENST00000546443 CREB3L3Q68CJ9 461 aa18.34■□□□□ 0.53
CALCOCO1-203ENST00000546443 TNPO1Q92973 898 aaKnown RBP18.34■□□□□ 0.53
CALCOCO1-203ENST00000546443 CNNM1Q9NRU3 951 aa18.34■□□□□ 0.53
CALCOCO1-203ENST00000546443 MYH7P12883 1935 aa18.34■□□□□ 0.53
CALCOCO1-203ENST00000546443 SLC27A2O14975 620 aa18.33■□□□□ 0.53
CALCOCO1-203ENST00000546443 CHGBP05060 677 aa18.33■□□□□ 0.53
CALCOCO1-203ENST00000546443 TTC39AQ5SRH9 613 aa18.33■□□□□ 0.53
CALCOCO1-203ENST00000546443 USPL1Q5W0Q7 1092 aa18.33■□□□□ 0.53
CALCOCO1-203ENST00000546443 FAM177BA6PVY3 158 aa18.33■□□□□ 0.52
CALCOCO1-203ENST00000546443 CYP2E1P05181 493 aaPredicted RBP18.33■□□□□ 0.52
CALCOCO1-203ENST00000546443 HSP90B1P14625 803 aaKnown RBP18.33■□□□□ 0.52
CALCOCO1-203ENST00000546443 MCMDC2Q4G0Z9 681 aa18.33■□□□□ 0.52
CALCOCO1-203ENST00000546443 ZGPATQ8N5A5 531 aaKnown RBP18.33■□□□□ 0.52
CALCOCO1-203ENST00000546443 ZSWIM6Q9HCJ5 1215 aa18.33■□□□□ 0.52
CALCOCO1-203ENST00000546443 HELLSQ9NRZ9 838 aa18.33■□□□□ 0.52
CALCOCO1-203ENST00000546443 A0A1B0GUL6 1792 aa18.32■□□□□ 0.52
CALCOCO1-203ENST00000546443 C4BP0C0L5 1744 aa18.32■□□□□ 0.52
CALCOCO1-203ENST00000546443 RPAP1Q9BWH6 1393 aaPredicted RBP18.32■□□□□ 0.52
CALCOCO1-203ENST00000546443 MROH5Q6ZUA9 1318 aa18.32■□□□□ 0.52
CALCOCO1-203ENST00000546443 PDE8BO95263 885 aa18.32■□□□□ 0.52
CALCOCO1-203ENST00000546443 ADCK5Q3MIX3 580 aa18.32■□□□□ 0.52
CALCOCO1-203ENST00000546443 ZMYM1Q5SVZ6 1142 aa18.32■□□□□ 0.52
CALCOCO1-203ENST00000546443 SEPT12Q8IYM1 358 aa18.32■□□□□ 0.52
CALCOCO1-203ENST00000546443 ZNF512BQ96KM6 892 aaPredicted RBP18.32■□□□□ 0.52
CALCOCO1-203ENST00000546443 BCL2L12Q9HB09 334 aa18.32■□□□□ 0.52
CALCOCO1-203ENST00000546443 C4AP0C0L4 1744 aa18.31■□□□□ 0.52
CALCOCO1-203ENST00000546443 FGFR2P21802 821 aa18.31■□□□□ 0.52
CALCOCO1-203ENST00000546443 TSGA10IPQ3SY00 556 aa18.31■□□□□ 0.52
CALCOCO1-203ENST00000546443 GORABQ5T7V8 394 aa18.31■□□□□ 0.52
CALCOCO1-203ENST00000546443 CLEC17AQ6ZS10 378 aa18.31■□□□□ 0.52
CALCOCO1-203ENST00000546443 INTS4Q96HW7 963 aaKnown RBP18.31■□□□□ 0.52
CALCOCO1-203ENST00000546443 SEC62Q99442 399 aaKnown RBP18.31■□□□□ 0.52
CALCOCO1-203ENST00000546443 NARFQ9UHQ1 456 aa18.31■□□□□ 0.52
CALCOCO1-203ENST00000546443 CCNL1Q9UK58 526 aaPredicted RBP18.31■□□□□ 0.52
CALCOCO1-203ENST00000546443 BRWD3Q6RI45 1802 aa18.31■□□□□ 0.52
CALCOCO1-203ENST00000546443 COL4A1P02462 1669 aa18.3■□□□□ 0.52
CALCOCO1-203ENST00000546443 SSFA2P28290 1259 aa18.3■□□□□ 0.52
CALCOCO1-203ENST00000546443 AK2P54819 239 aa18.3■□□□□ 0.52
CALCOCO1-203ENST00000546443 NUCB2P80303 420 aa18.3■□□□□ 0.52
CALCOCO1-203ENST00000546443 SCARF1Q14162 830 aa18.3■□□□□ 0.52
CALCOCO1-203ENST00000546443 CCDC152Q4G0S7 254 aa18.3■□□□□ 0.52
CALCOCO1-203ENST00000546443 CCDC129Q6ZRS4 1044 aa18.3■□□□□ 0.52
CALCOCO1-203ENST00000546443 JAKMIP1Q96N16 626 aaKnown RBP18.3■□□□□ 0.52
CALCOCO1-203ENST00000546443 RNF113AO15541 343 aaKnown RBP18.29■□□□□ 0.52
CALCOCO1-203ENST00000546443 ZKSCAN1P17029 563 aaPredicted RBP18.29■□□□□ 0.52
CALCOCO1-203ENST00000546443 CASTP20810 708 aaKnown RBP18.29■□□□□ 0.52
CALCOCO1-203ENST00000546443 KCNJ4P48050 445 aa18.29■□□□□ 0.52
CALCOCO1-203ENST00000546443 SMIM5Q71RC9 77 aa18.29■□□□□ 0.52
CALCOCO1-203ENST00000546443 SEC31BQ9NQW1 1179 aa18.29■□□□□ 0.52
CALCOCO1-203ENST00000546443 HMG20BQ9P0W2 317 aa18.29■□□□□ 0.52
CALCOCO1-203ENST00000546443 ERFEQ4G0M1 354 aa18.28■□□□□ 0.52
CALCOCO1-203ENST00000546443 VPS53Q5VIR6 699 aa18.28■□□□□ 0.52
CALCOCO1-203ENST00000546443 RNF20Q5VTR2 975 aa18.28■□□□□ 0.52
CALCOCO1-203ENST00000546443 U3KPZ7 1027 aaPredicted RBP18.28■□□□□ 0.52
CALCOCO1-203ENST00000546443 CPA1P15085 419 aa18.28■□□□□ 0.52
CALCOCO1-203ENST00000546443 DEKP35659 375 aaKnown RBP18.28■□□□□ 0.52
CALCOCO1-203ENST00000546443 ZAP70P43403 619 aa18.28■□□□□ 0.52
CALCOCO1-203ENST00000546443 SF3B3Q15393 1217 aaKnown RBP18.28■□□□□ 0.52
CALCOCO1-203ENST00000546443 SLFNL1Q499Z3 407 aa18.28■□□□□ 0.52
CALCOCO1-203ENST00000546443 SLC10A5Q5PT55 438 aa18.28■□□□□ 0.52
CALCOCO1-203ENST00000546443 TBC1D9BQ66K14 1250 aa18.28■□□□□ 0.52
CALCOCO1-203ENST00000546443 NOL8Q76FK4 1167 aaKnown RBP18.28■□□□□ 0.52
CALCOCO1-203ENST00000546443 RUFY3Q7L099 469 aa18.28■□□□□ 0.52
CALCOCO1-203ENST00000546443 CYP46A1Q9Y6A2 500 aa18.28■□□□□ 0.52
CALCOCO1-203ENST00000546443 GNPATO15228 680 aa18.27■□□□□ 0.51
CALCOCO1-203ENST00000546443 ARID4AP29374 1257 aaPredicted RBP18.27■□□□□ 0.51
CALCOCO1-203ENST00000546443 FKBP4Q02790 459 aaKnown RBP eCLIP18.27■□□□□ 0.51
CALCOCO1-203ENST00000546443 PUM3Q15397 648 aaKnown RBP18.27■□□□□ 0.51
CALCOCO1-203ENST00000546443 LPIN2Q92539 896 aa18.27■□□□□ 0.51
CALCOCO1-203ENST00000546443 GBP4Q96PP9 640 aa18.27■□□□□ 0.51
CALCOCO1-203ENST00000546443 BCL11BQ9C0K0 894 aaPredicted RBP18.27■□□□□ 0.51
CALCOCO1-203ENST00000546443 QTRT2Q9H974 415 aaKnown RBP18.27■□□□□ 0.51
CALCOCO1-203ENST00000546443 PDRG1Q9NUG6 133 aa18.27■□□□□ 0.51
CALCOCO1-203ENST00000546443 LIMCH1Q9UPQ0 1083 aa18.27■□□□□ 0.51
CALCOCO1-203ENST00000546443 TAF6LQ9Y6J9 622 aa18.27■□□□□ 0.51
CALCOCO1-203ENST00000546443 MYO5AQ9Y4I1 1855 aaKnown RBP18.27■□□□□ 0.51
CALCOCO1-203ENST00000546443 LAMA4Q16363 1823 aa18.26■□□□□ 0.51
CALCOCO1-203ENST00000546443 MAST3O60307 1309 aa18.26■□□□□ 0.51
CALCOCO1-203ENST00000546443 DDX11L8A8MPP1 907 aa18.26■□□□□ 0.51
CALCOCO1-203ENST00000546443 PSMA5P28066 241 aa18.26■□□□□ 0.51
CALCOCO1-203ENST00000546443 MCAMP43121 646 aa18.26■□□□□ 0.51
CALCOCO1-203ENST00000546443 AMIGO3Q86WK7 504 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms