RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 FTSJ3Q8IY81 847 aaKnown RBP24■■□□□ 1.43
DDX55-211ENST00000544429 HDAC5Q9UQL6 1122 aa24■■□□□ 1.43
DDX55-211ENST00000544429 CHMP3Q9Y3E7 222 aa24■■□□□ 1.43
DDX55-211ENST00000544429 LRRFIP2Q9Y608 721 aaKnown RBP24■■□□□ 1.43
DDX55-211ENST00000544429 RFX5P48382 616 aaPredicted RBP23.99■■□□□ 1.43
DDX55-211ENST00000544429 AOC3Q16853 763 aa23.99■■□□□ 1.43
DDX55-211ENST00000544429 ZNF594Q96JF6 807 aaPredicted RBP23.99■■□□□ 1.43
DDX55-211ENST00000544429 MPHOSPH8Q99549 860 aa23.99■■□□□ 1.43
DDX55-211ENST00000544429 ZBTB7BO15156 539 aaPredicted RBP23.98■■□□□ 1.43
DDX55-211ENST00000544429 PPIP5K2O43314 1243 aa23.98■■□□□ 1.43
DDX55-211ENST00000544429 MTX1Q13505 466 aa23.98■■□□□ 1.43
DDX55-211ENST00000544429 WDR90Q96KV7 1748 aa23.98■■□□□ 1.43
DDX55-211ENST00000544429 GLTPD2A6NH11 291 aa23.97■■□□□ 1.43
DDX55-211ENST00000544429 MS4A1P11836 297 aa23.97■■□□□ 1.43
DDX55-211ENST00000544429 LARGE2Q8N3Y3 721 aa23.97■■□□□ 1.43
DDX55-211ENST00000544429 PANK1Q8TE04 598 aa23.97■■□□□ 1.43
DDX55-211ENST00000544429 ANKIB1Q9P2G1 1089 aa23.97■■□□□ 1.43
DDX55-211ENST00000544429 GGA1Q9UJY5 639 aa23.97■■□□□ 1.43
DDX55-211ENST00000544429 WTIPA6NIX2 430 aaPredicted RBP23.96■■□□□ 1.43
DDX55-211ENST00000544429 PLIN1O60240 522 aa23.96■■□□□ 1.43
DDX55-211ENST00000544429 ATP2B4P23634 1241 aa23.96■■□□□ 1.43
DDX55-211ENST00000544429 CHRNDQ07001 517 aa23.96■■□□□ 1.43
DDX55-211ENST00000544429 LDHAL6AQ6ZMR3 332 aa23.96■■□□□ 1.43
DDX55-211ENST00000544429 UFL1O94874 794 aa23.95■■□□□ 1.42
DDX55-211ENST00000544429 WASHC4Q2M389 1173 aa23.95■■□□□ 1.42
DDX55-211ENST00000544429 JDP2Q8WYK2 163 aa23.95■■□□□ 1.42
DDX55-211ENST00000544429 ANKRD2Q9GZV1 360 aa23.95■■□□□ 1.42
DDX55-211ENST00000544429 RIPOR2Q9Y4F9 1068 aa23.95■■□□□ 1.42
DDX55-211ENST00000544429 ZNF541Q9H0D2 1346 aa23.94■■□□□ 1.42
DDX55-211ENST00000544429 C6orf229H3BNL8 230 aa23.94■■□□□ 1.42
DDX55-211ENST00000544429 GNAI2P04899 355 aa23.94■■□□□ 1.42
DDX55-211ENST00000544429 PTPN12Q05209 780 aaKnown RBP23.94■■□□□ 1.42
DDX55-211ENST00000544429 PDE3AQ14432 1141 aa23.94■■□□□ 1.42
DDX55-211ENST00000544429 ITPRIPQ8IWB1 547 aa23.94■■□□□ 1.42
DDX55-211ENST00000544429 EYA3Q99504 573 aa23.94■■□□□ 1.42
DDX55-211ENST00000544429 PUS3Q9BZE2 481 aaKnown RBP23.94■■□□□ 1.42
DDX55-211ENST00000544429 LEMD3Q9Y2U8 911 aa23.94■■□□□ 1.42
DDX55-211ENST00000544429 PSME4Q14997 1843 aa23.94■■□□□ 1.42
DDX55-211ENST00000544429 MED23Q9ULK4 1368 aa23.93■■□□□ 1.42
DDX55-211ENST00000544429 KDM2BQ8NHM5 1336 aa23.93■■□□□ 1.42
DDX55-211ENST00000544429 IRS2Q9Y4H2 1338 aa23.93■■□□□ 1.42
DDX55-211ENST00000544429 SCN9AQ15858 1988 aa23.93■■□□□ 1.42
DDX55-211ENST00000544429 TAF7LQ5H9L4 462 aa23.93■■□□□ 1.42
DDX55-211ENST00000544429 GPR101Q96P66 508 aaPredicted RBP23.93■■□□□ 1.42
DDX55-211ENST00000544429 NIM1KQ8IY84 436 aa23.92■■□□□ 1.42
DDX55-211ENST00000544429 GPBP1L1Q9HC44 474 aaPredicted RBP23.92■■□□□ 1.42
DDX55-211ENST00000544429 ZNRF3Q9ULT6 936 aa23.92■■□□□ 1.42
DDX55-211ENST00000544429 YDJCA8MPS7 323 aa23.91■■□□□ 1.42
DDX55-211ENST00000544429 MVPQ14764 893 aaKnown RBP23.91■■□□□ 1.42
DDX55-211ENST00000544429 DPY19L2Q6NUT2 758 aa23.91■■□□□ 1.42
DDX55-211ENST00000544429 KLHDC4Q8TBB5 520 aa23.91■■□□□ 1.42
DDX55-211ENST00000544429 ZNF526Q8TF50 670 aaPredicted RBP23.91■■□□□ 1.42
DDX55-211ENST00000544429 CNNM1Q9NRU3 951 aa23.91■■□□□ 1.42
DDX55-211ENST00000544429 ZNF646O15015 1829 aaPredicted RBP23.91■■□□□ 1.42
DDX55-211ENST00000544429 ZNF804BA4D1E1 1349 aa23.9■■□□□ 1.42
DDX55-211ENST00000544429 SCN4AP35499 1836 aa23.9■■□□□ 1.42
DDX55-211ENST00000544429 LRRC24Q50LG9 513 aa23.9■■□□□ 1.42
DDX55-211ENST00000544429 C20orf194Q5TEA3 1177 aa23.9■■□□□ 1.42
DDX55-211ENST00000544429 C15orf52Q6ZUT6 534 aaKnown RBP23.9■■□□□ 1.42
DDX55-211ENST00000544429 VGLL2Q8N8G2 317 aa23.9■■□□□ 1.42
DDX55-211ENST00000544429 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.9■■□□□ 1.42
DDX55-211ENST00000544429 L3MBTL3Q96JM7 780 aaPredicted RBP23.9■■□□□ 1.42
DDX55-211ENST00000544429 FBXO3Q9UK99 471 aa23.9■■□□□ 1.42
DDX55-211ENST00000544429 POTECB2RU33 542 aa23.89■■□□□ 1.41
DDX55-211ENST00000544429 KIF3CO14782 793 aa23.89■■□□□ 1.41
DDX55-211ENST00000544429 DDNO94850 711 aaPredicted RBP23.89■■□□□ 1.41
DDX55-211ENST00000544429 GPC2Q8N158 579 aa23.89■■□□□ 1.41
DDX55-211ENST00000544429 ZC3H12CQ9C0D7 883 aaKnown RBP23.89■■□□□ 1.41
DDX55-211ENST00000544429 NMRK2Q9NPI5 230 aa23.89■■□□□ 1.41
DDX55-211ENST00000544429 COPRSQ9NQ92 184 aa23.89■■□□□ 1.41
DDX55-211ENST00000544429 MROH5Q6ZUA9 1318 aa23.88■■□□□ 1.41
DDX55-211ENST00000544429 RIMBP2O15034 1052 aa23.88■■□□□ 1.41
DDX55-211ENST00000544429 TAF5LO75529 589 aa23.88■■□□□ 1.41
DDX55-211ENST00000544429 ATG9AQ7Z3C6 839 aa23.88■■□□□ 1.41
DDX55-211ENST00000544429 TXNRD3Q86VQ6 643 aa23.88■■□□□ 1.41
DDX55-211ENST00000544429 HELBQ8NG08 1087 aaPredicted RBP23.88■■□□□ 1.41
DDX55-211ENST00000544429 SNAP23O00161 211 aa23.87■■□□□ 1.41
DDX55-211ENST00000544429 EYA2O00167 538 aa23.87■■□□□ 1.41
DDX55-211ENST00000544429 CIAO1O76071 339 aa23.87■■□□□ 1.41
DDX55-211ENST00000544429 EIF6P56537 245 aaKnown RBP23.87■■□□□ 1.41
DDX55-211ENST00000544429 CXCL9Q07325 125 aa23.87■■□□□ 1.41
DDX55-211ENST00000544429 DBNDD1Q9H9R9 158 aa23.87■■□□□ 1.41
DDX55-211ENST00000544429 DDX19BQ9UMR2 479 aa23.87■■□□□ 1.41
DDX55-211ENST00000544429 COG6Q9Y2V7 657 aa23.87■■□□□ 1.41
DDX55-211ENST00000544429 PNMA6EA0A0J9YXQ4 647 aa23.86■■□□□ 1.41
DDX55-211ENST00000544429 SRGAP3O43295 1099 aa23.86■■□□□ 1.41
DDX55-211ENST00000544429 KLRK1P26718 216 aa23.86■■□□□ 1.41
DDX55-211ENST00000544429 ZBTB40Q9NUA8 1239 aa23.86■■□□□ 1.41
DDX55-211ENST00000544429 ECE2O60344 883 aa23.85■■□□□ 1.41
DDX55-211ENST00000544429 POLA2Q14181 598 aa23.85■■□□□ 1.41
DDX55-211ENST00000544429 DOK7Q18PE1 504 aa23.85■■□□□ 1.41
DDX55-211ENST00000544429 RRP1P56182 461 aaKnown RBP23.84■■□□□ 1.41
DDX55-211ENST00000544429 ATP8B2P98198 1209 aa23.84■■□□□ 1.41
DDX55-211ENST00000544429 UBE4AQ14139 1066 aa23.84■■□□□ 1.41
DDX55-211ENST00000544429 SSH3Q8TE77 659 aa23.84■■□□□ 1.41
DDX55-211ENST00000544429 C1orf115Q9H7X2 142 aa23.84■■□□□ 1.41
DDX55-211ENST00000544429 RRAGCQ9HB90 399 aa23.84■■□□□ 1.41
DDX55-211ENST00000544429 PA2G4Q9UQ80 394 aaKnown RBP23.84■■□□□ 1.41
DDX55-211ENST00000544429 ZNF609O15014 1411 aa23.84■■□□□ 1.41
DDX55-211ENST00000544429 PDE8BO95263 885 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms