RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 MED1Q15648 1581 aaPredicted RBP9.25□□□□□ -0.93
LRP6-206ENST00000543091 BLOC1S2Q6QNY1 142 aa9.25□□□□□ -0.93
LRP6-206ENST00000543091 ZNF594Q96JF6 807 aaPredicted RBP9.25□□□□□ -0.93
LRP6-206ENST00000543091 BRMS1Q9HCU9 246 aa9.25□□□□□ -0.93
LRP6-206ENST00000543091 RABEP1Q15276 862 aa9.25□□□□□ -0.93
LRP6-206ENST00000543091 SF3A1Q15459 793 aaKnown RBP9.25□□□□□ -0.93
LRP6-206ENST00000543091 DPY19L2Q6NUT2 758 aa9.25□□□□□ -0.93
LRP6-206ENST00000543091 MAP2P11137 1827 aaKnown RBP9.25□□□□□ -0.93
LRP6-206ENST00000543091 CCDC69A6NI79 296 aa9.25□□□□□ -0.93
LRP6-206ENST00000543091 TNNI2P48788 182 aa9.25□□□□□ -0.93
LRP6-206ENST00000543091 PDE1AP54750 535 aa9.25□□□□□ -0.93
LRP6-206ENST00000543091 ERFEQ4G0M1 354 aa9.25□□□□□ -0.93
LRP6-206ENST00000543091 CABP5Q9NP86 173 aa9.25□□□□□ -0.93
LRP6-206ENST00000543091 CEMIPQ8WUJ3 1361 aa9.25□□□□□ -0.93
LRP6-206ENST00000543091 MPHOSPH10O00566 681 aaKnown RBP9.24□□□□□ -0.93
LRP6-206ENST00000543091 PPEF1O14829 653 aaPredicted RBP9.24□□□□□ -0.93
LRP6-206ENST00000543091 PTMSP20962 102 aa9.24□□□□□ -0.93
LRP6-206ENST00000543091 R3HDM1Q15032 1099 aaKnown RBP9.24□□□□□ -0.93
LRP6-206ENST00000543091 SLC15A2Q16348 729 aa9.24□□□□□ -0.93
LRP6-206ENST00000543091 DALRD3Q5D0E6 543 aaKnown RBP9.24□□□□□ -0.93
LRP6-206ENST00000543091 CERS3Q8IU89 383 aa9.24□□□□□ -0.93
LRP6-206ENST00000543091 TTLL6Q8N841 843 aa9.24□□□□□ -0.93
LRP6-206ENST00000543091 MASTLQ96GX5 879 aa9.24□□□□□ -0.93
LRP6-206ENST00000543091 PAG1Q9NWQ8 432 aa9.24□□□□□ -0.93
LRP6-206ENST00000543091 EIF5P55010 431 aaKnown RBP9.24□□□□□ -0.93
LRP6-206ENST00000543091 TNNI3KQ59H18 835 aa9.24□□□□□ -0.93
LRP6-206ENST00000543091 BMP2KLQ5H9B9 411 aa9.24□□□□□ -0.93
LRP6-206ENST00000543091 STK11IPQ8N1F8 1099 aa9.24□□□□□ -0.93
LRP6-206ENST00000543091 SMC3Q9UQE7 1217 aa9.24□□□□□ -0.93
LRP6-206ENST00000543091 FPGT-TNNI3KV9GXZ4 949 aa9.24□□□□□ -0.93
LRP6-206ENST00000543091 NALCNQ8IZF0 1738 aa9.24□□□□□ -0.93
LRP6-206ENST00000543091 CCDC93Q567U6 631 aa9.24□□□□□ -0.93
LRP6-206ENST00000543091 SLC9C2Q5TAH2 1124 aa9.24□□□□□ -0.93
LRP6-206ENST00000543091 SLKQ9H2G2 1235 aaPredicted RBP9.24□□□□□ -0.93
LRP6-206ENST00000543091 XDHP47989 1333 aa9.24□□□□□ -0.93
LRP6-206ENST00000543091 ZNF213O14771 459 aa9.24□□□□□ -0.93
LRP6-206ENST00000543091 NEK4P51957 841 aa9.24□□□□□ -0.93
LRP6-206ENST00000543091 PDE4BQ07343 736 aa9.24□□□□□ -0.93
LRP6-206ENST00000543091 EZH2Q15910 746 aaKnown RBP9.24□□□□□ -0.93
LRP6-206ENST00000543091 PPP4R3BQ5MIZ7 849 aa9.24□□□□□ -0.93
LRP6-206ENST00000543091 MCTP1Q6DN14 999 aa9.24□□□□□ -0.93
LRP6-206ENST00000543091 PAXIP1Q6ZW49 1069 aaPredicted RBP9.24□□□□□ -0.93
LRP6-206ENST00000543091 IQCA1Q86XH1 822 aa9.24□□□□□ -0.93
LRP6-206ENST00000543091 PIM2Q9P1W9 311 aa9.24□□□□□ -0.93
LRP6-206ENST00000543091 LEMD3Q9Y2U8 911 aa9.24□□□□□ -0.93
LRP6-206ENST00000543091 ROBO1Q9Y6N7 1651 aa9.23□□□□□ -0.93
LRP6-206ENST00000543091 GRIPAP1Q4V328 841 aa9.23□□□□□ -0.93
LRP6-206ENST00000543091 SUSD4Q5VX71 490 aa9.23□□□□□ -0.93
LRP6-206ENST00000543091 DEFB132Q7Z7B7 95 aa9.23□□□□□ -0.93
LRP6-206ENST00000543091 SMC5Q8IY18 1101 aa9.23□□□□□ -0.93
LRP6-206ENST00000543091 TULP1O00294 542 aaPredicted RBP9.23□□□□□ -0.93
LRP6-206ENST00000543091 TIMM10P62072 90 aa9.23□□□□□ -0.93
LRP6-206ENST00000543091 TTC22Q5TAA0 569 aa9.23□□□□□ -0.93
LRP6-206ENST00000543091 TRIM22Q8IYM9 498 aa9.23□□□□□ -0.93
LRP6-206ENST00000543091 PSDA5PKW4 1024 aaPredicted RBP9.23□□□□□ -0.93
LRP6-206ENST00000543091 TAF5LO75529 589 aa9.23□□□□□ -0.93
LRP6-206ENST00000543091 GNAT2P19087 354 aa9.23□□□□□ -0.93
LRP6-206ENST00000543091 TRIM28Q13263 835 aaKnown RBP9.23□□□□□ -0.93
LRP6-206ENST00000543091 UBE4AQ14139 1066 aa9.23□□□□□ -0.93
LRP6-206ENST00000543091 KLHDC4Q8TBB5 520 aa9.23□□□□□ -0.93
LRP6-206ENST00000543091 SSH3Q8TE77 659 aa9.23□□□□□ -0.93
LRP6-206ENST00000543091 XAGE2Q96GT9 111 aa9.23□□□□□ -0.93
LRP6-206ENST00000543091 IGHDP01880 384 aa9.23□□□□□ -0.93
LRP6-206ENST00000543091 HLFQ16534 295 aa9.23□□□□□ -0.93
LRP6-206ENST00000543091 RBM26Q5T8P6 1007 aaKnown RBP9.23□□□□□ -0.93
LRP6-206ENST00000543091 LINC00116Q8NCU8 138 aa9.23□□□□□ -0.93
LRP6-206ENST00000543091 VEZTQ9HBM0 779 aa9.23□□□□□ -0.93
LRP6-206ENST00000543091 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.23□□□□□ -0.93
LRP6-206ENST00000543091 RTKN2Q8IZC4 609 aa9.22□□□□□ -0.93
LRP6-206ENST00000543091 GREM2Q9H772 168 aa9.22□□□□□ -0.93
LRP6-206ENST00000543091 COPRSQ9NQ92 184 aa9.22□□□□□ -0.93
LRP6-206ENST00000543091 FOXD4L1Q9NU39 408 aa9.22□□□□□ -0.93
LRP6-206ENST00000543091 H7C1D1 291 aa9.22□□□□□ -0.93
LRP6-206ENST00000543091 PLSCR1O15162 318 aa9.22□□□□□ -0.93
LRP6-206ENST00000543091 HMGB1P09429 215 aaKnown RBP9.22□□□□□ -0.93
LRP6-206ENST00000543091 CDK11BP21127 795 aaKnown RBP9.22□□□□□ -0.93
LRP6-206ENST00000543091 CAMTA1Q9Y6Y1 1673 aa9.22□□□□□ -0.93
LRP6-206ENST00000543091 ITPK1Q13572 414 aa9.22□□□□□ -0.93
LRP6-206ENST00000543091 GRAPQ13588 217 aa9.22□□□□□ -0.93
LRP6-206ENST00000543091 NFIXQ14938 502 aa9.22□□□□□ -0.93
LRP6-206ENST00000543091 GRAPLQ8TC17 118 aaPredicted RBP9.22□□□□□ -0.93
LRP6-206ENST00000543091 HOOK2Q96ED9 719 aa9.22□□□□□ -0.93
LRP6-206ENST00000543091 MAGEB6P1A0A0J9YX57 407 aa9.21□□□□□ -0.93
LRP6-206ENST00000543091 NBPF26B4DH59 902 aa9.21□□□□□ -0.93
LRP6-206ENST00000543091 NBPF10Q6P3W6 841 aaKnown RBP9.21□□□□□ -0.93
LRP6-206ENST00000543091 NBPF15Q8N660 670 aa9.21□□□□□ -0.93
LRP6-206ENST00000543091 FEZ1Q99689 392 aa9.21□□□□□ -0.93
LRP6-206ENST00000543091 BRIP1Q9BX63 1249 aa9.21□□□□□ -0.93
LRP6-206ENST00000543091 PNMA6EA0A0J9YXQ4 647 aa9.21□□□□□ -0.93
LRP6-206ENST00000543091 H7C1W4 665 aa9.21□□□□□ -0.93
LRP6-206ENST00000543091 RANBP6O60518 1105 aaKnown RBP9.21□□□□□ -0.93
LRP6-206ENST00000543091 CIAO1O76071 339 aa9.21□□□□□ -0.93
LRP6-206ENST00000543091 TBC1D9BQ66K14 1250 aa9.21□□□□□ -0.93
LRP6-206ENST00000543091 DBNDD2Q9BQY9 259 aa9.21□□□□□ -0.93
LRP6-206ENST00000543091 CDKL5O76039 1030 aa9.21□□□□□ -0.94
LRP6-206ENST00000543091 JAKMIP1Q96N16 626 aaKnown RBP9.21□□□□□ -0.94
LRP6-206ENST00000543091 SLIT3O75094 1523 aa9.21□□□□□ -0.94
LRP6-206ENST00000543091 CDHR2Q9BYE9 1310 aa9.21□□□□□ -0.94
LRP6-206ENST00000543091 RNF113AO15541 343 aaKnown RBP9.21□□□□□ -0.94
LRP6-206ENST00000543091 PDCP20941 246 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms