RNA–Protein interactions for RNA: ENST00000541774.5

ERBB2-204, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-204ENST00000541774 LRRC8AQ8IWT6 810 aa12.62□□□□□ -0.39
ERBB2-204ENST00000541774 CCDC113Q9H0I3 377 aa12.62□□□□□ -0.39
ERBB2-204ENST00000541774 TMX4Q9H1E5 349 aaPredicted RBP12.62□□□□□ -0.39
ERBB2-204ENST00000541774 ZNF569Q5MCW4 686 aa12.61□□□□□ -0.39
ERBB2-204ENST00000541774 PER1O15534 1290 aaPredicted RBP12.61□□□□□ -0.39
ERBB2-204ENST00000541774 C16orf71Q8IYS4 520 aaPredicted RBP12.61□□□□□ -0.39
ERBB2-204ENST00000541774 MPHOSPH8Q99549 860 aa12.61□□□□□ -0.39
ERBB2-204ENST00000541774 PARD3Q8TEW0 1356 aa12.61□□□□□ -0.39
ERBB2-204ENST00000541774 RALGAPBQ86X10 1494 aa12.61□□□□□ -0.39
ERBB2-204ENST00000541774 PIP4K2AP48426 406 aaPredicted RBP12.61□□□□□ -0.39
ERBB2-204ENST00000541774 HLTFQ14527 1009 aaKnown RBP eCLIP12.61□□□□□ -0.39
ERBB2-204ENST00000541774 E2F5Q15329 346 aa12.61□□□□□ -0.39
ERBB2-204ENST00000541774 IMMTQ16891 758 aaKnown RBP12.61□□□□□ -0.39
ERBB2-204ENST00000541774 STRN4Q9NRL3 753 aa12.61□□□□□ -0.39
ERBB2-204ENST00000541774 FAN1Q9Y2M0 1017 aa12.61□□□□□ -0.39
ERBB2-204ENST00000541774 ZCCHC11Q5TAX3 1644 aaKnown RBP12.61□□□□□ -0.39
ERBB2-204ENST00000541774 ATP2B2Q01814 1243 aa12.61□□□□□ -0.39
ERBB2-204ENST00000541774 FAM160A1Q05DH4 1040 aa12.61□□□□□ -0.39
ERBB2-204ENST00000541774 TSHZ3Q63HK5 1081 aa12.61□□□□□ -0.39
ERBB2-204ENST00000541774 PNMA8AQ86V59 439 aaPredicted RBP12.61□□□□□ -0.39
ERBB2-204ENST00000541774 PSMD1Q99460 953 aa12.61□□□□□ -0.39
ERBB2-204ENST00000541774 ANAPC15P60006 121 aa12.6□□□□□ -0.39
ERBB2-204ENST00000541774 GUCY1B3Q02153 619 aa12.6□□□□□ -0.39
ERBB2-204ENST00000541774 IFFO1Q0D2I5 559 aa12.6□□□□□ -0.39
ERBB2-204ENST00000541774 KLHL10Q6JEL2 608 aa12.6□□□□□ -0.39
ERBB2-204ENST00000541774 CCDC47Q96A33 483 aaKnown RBP12.6□□□□□ -0.39
ERBB2-204ENST00000541774 JADE2Q9NQC1 790 aa12.6□□□□□ -0.39
ERBB2-204ENST00000541774 C9orf78Q9NZ63 289 aaPredicted RBP12.6□□□□□ -0.39
ERBB2-204ENST00000541774 TSPYL4Q9UJ04 414 aa12.6□□□□□ -0.39
ERBB2-204ENST00000541774 FYB1O15117 783 aa12.6□□□□□ -0.39
ERBB2-204ENST00000541774 TMPOP42166 694 aaKnown RBP12.6□□□□□ -0.39
ERBB2-204ENST00000541774 CPLX4Q7Z7G2 160 aa12.6□□□□□ -0.39
ERBB2-204ENST00000541774 NUTM1Q86Y26 1132 aa12.6□□□□□ -0.39
ERBB2-204ENST00000541774 ERCC3P19447 782 aa12.6□□□□□ -0.39
ERBB2-204ENST00000541774 TRDNQ13061 729 aa12.6□□□□□ -0.39
ERBB2-204ENST00000541774 G3BP1Q13283 466 aaKnown RBP eCLIP12.6□□□□□ -0.39
ERBB2-204ENST00000541774 NEXNQ0ZGT2 675 aa12.59□□□□□ -0.39
ERBB2-204ENST00000541774 LONRF2Q1L5Z9 754 aa12.59□□□□□ -0.39
ERBB2-204ENST00000541774 C1orf141Q5JVX7 400 aa12.59□□□□□ -0.39
ERBB2-204ENST00000541774 WDR66Q8TBY9 1149 aa12.59□□□□□ -0.39
ERBB2-204ENST00000541774 FAM204AQ9H8W3 233 aa12.59□□□□□ -0.39
ERBB2-204ENST00000541774 ATAD2Q6PL18 1390 aa12.59□□□□□ -0.39
ERBB2-204ENST00000541774 NPATQ14207 1427 aa12.59□□□□□ -0.39
ERBB2-204ENST00000541774 LRRIQ1Q96JM4 1722 aa12.59□□□□□ -0.39
ERBB2-204ENST00000541774 CEP120Q8N960 986 aa12.59□□□□□ -0.39
ERBB2-204ENST00000541774 MAGEC2Q9UBF1 373 aaPredicted RBP12.59□□□□□ -0.39
ERBB2-204ENST00000541774 PCK1P35558 622 aa12.59□□□□□ -0.39
ERBB2-204ENST00000541774 STIM1Q13586 685 aa12.59□□□□□ -0.39
ERBB2-204ENST00000541774 DBN1Q16643 649 aa12.59□□□□□ -0.39
ERBB2-204ENST00000541774 ALDH1L2Q3SY69 923 aa12.59□□□□□ -0.39
ERBB2-204ENST00000541774 SLFNL1Q499Z3 407 aa12.59□□□□□ -0.39
ERBB2-204ENST00000541774 MCM10Q7L590 875 aa12.58□□□□□ -0.39
ERBB2-204ENST00000541774 RNF168Q8IYW5 571 aaPredicted RBP12.58□□□□□ -0.39
ERBB2-204ENST00000541774 ZNF692Q9BU19 519 aaPredicted RBP12.58□□□□□ -0.39
ERBB2-204ENST00000541774 ACEP12821 1306 aa12.58□□□□□ -0.39
ERBB2-204ENST00000541774 CLSTN1O94985 981 aa12.58□□□□□ -0.4
ERBB2-204ENST00000541774 DNA2P51530 1060 aa12.58□□□□□ -0.4
ERBB2-204ENST00000541774 FAM71BQ8TC56 605 aa12.58□□□□□ -0.4
ERBB2-204ENST00000541774 BICC1Q9H694 974 aaKnown RBP12.58□□□□□ -0.4
ERBB2-204ENST00000541774 DONSONQ9NYP3 566 aa12.58□□□□□ -0.4
ERBB2-204ENST00000541774 SPG7Q9UQ90 795 aa12.58□□□□□ -0.4
ERBB2-204ENST00000541774 MRFAP1Q9Y605 127 aa12.58□□□□□ -0.4
ERBB2-204ENST00000541774 KCNA6P17658 529 aa12.58□□□□□ -0.4
ERBB2-204ENST00000541774 CKAP4Q07065 602 aaKnown RBP12.58□□□□□ -0.4
ERBB2-204ENST00000541774 ARMC2Q8NEN0 867 aa12.58□□□□□ -0.4
ERBB2-204ENST00000541774 GDAP1L1Q96MZ0 367 aa12.58□□□□□ -0.4
ERBB2-204ENST00000541774 NUP88Q99567 741 aaPredicted RBP12.58□□□□□ -0.4
ERBB2-204ENST00000541774 RIPOR2Q9Y4F9 1068 aa12.58□□□□□ -0.4
ERBB2-204ENST00000541774 HIP1O00291 1037 aa12.58□□□□□ -0.4
ERBB2-204ENST00000541774 PPFIA4O75335 1185 aa12.58□□□□□ -0.4
ERBB2-204ENST00000541774 GNGT1P63211 74 aa12.58□□□□□ -0.4
ERBB2-204ENST00000541774 GIGYF2Q6Y7W6 1299 aaKnown RBP12.58□□□□□ -0.4
ERBB2-204ENST00000541774 RALYLQ86SE5 291 aaKnown RBP12.58□□□□□ -0.4
ERBB2-204ENST00000541774 PPP1R12CQ9BZL4 782 aa12.58□□□□□ -0.4
ERBB2-204ENST00000541774 ZBTB40Q9NUA8 1239 aa12.58□□□□□ -0.4
ERBB2-204ENST00000541774 SLC4A2P04920 1241 aa12.57□□□□□ -0.4
ERBB2-204ENST00000541774 WHAMMP3Q1A5X7 153 aa12.57□□□□□ -0.4
ERBB2-204ENST00000541774 FAM173BQ6P4H8 233 aa12.57□□□□□ -0.4
ERBB2-204ENST00000541774 NFXL1Q6ZNB6 911 aa12.57□□□□□ -0.4
ERBB2-204ENST00000541774 ARFGAP2Q8N6H7 521 aa12.57□□□□□ -0.4
ERBB2-204ENST00000541774 ESYT1Q9BSJ8 1104 aa12.57□□□□□ -0.4
ERBB2-204ENST00000541774 SWAP70Q9UH65 585 aa12.57□□□□□ -0.4
ERBB2-204ENST00000541774 UHRF1BP1LA0JNW5 1464 aa12.57□□□□□ -0.4
ERBB2-204ENST00000541774 MYO5CQ9NQX4 1742 aa12.57□□□□□ -0.4
ERBB2-204ENST00000541774 FAM83GA6ND36 823 aa12.57□□□□□ -0.4
ERBB2-204ENST00000541774 ST5P78524 1137 aa12.57□□□□□ -0.4
ERBB2-204ENST00000541774 AIMP1Q12904 312 aaKnown RBP12.57□□□□□ -0.4
ERBB2-204ENST00000541774 CCDC6Q16204 474 aa12.57□□□□□ -0.4
ERBB2-204ENST00000541774 ANKS4BQ8N8V4 417 aa12.57□□□□□ -0.4
ERBB2-204ENST00000541774 RIMS2Q9UQ26 1411 aa12.57□□□□□ -0.4
ERBB2-204ENST00000541774 CHUKO15111 745 aa12.57□□□□□ -0.4
ERBB2-204ENST00000541774 CTIFO43310 598 aaKnown RBP12.57□□□□□ -0.4
ERBB2-204ENST00000541774 ECM2O94769 699 aaPredicted RBP12.57□□□□□ -0.4
ERBB2-204ENST00000541774 LTKP29376 864 aa12.57□□□□□ -0.4
ERBB2-204ENST00000541774 SNCBQ16143 134 aa12.57□□□□□ -0.4
ERBB2-204ENST00000541774 CAPZA3Q96KX2 299 aa12.57□□□□□ -0.4
ERBB2-204ENST00000541774 BAG1Q99933 345 aaPredicted RBP12.57□□□□□ -0.4
ERBB2-204ENST00000541774 GNL3LQ9NVN8 582 aaKnown RBP12.57□□□□□ -0.4
ERBB2-204ENST00000541774 A6NNZ2 444 aa12.56□□□□□ -0.4
ERBB2-204ENST00000541774 SLC8A1P32418 973 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms