RNA–Protein interactions for RNA: ENST00000541421.2

SMLR1-201, Transcript of small leucine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMLR1, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMLR1-201ENST00000541421 CCDC191Q8NCU4 936 aa12.29□□□□□ -0.44
SMLR1-201ENST00000541421 PRDM11Q9NQV5 511 aa12.29□□□□□ -0.44
SMLR1-201ENST00000541421 NUP188Q5SRE5 1749 aa12.28□□□□□ -0.44
SMLR1-201ENST00000541421 HMGB1P09429 215 aaKnown RBP12.28□□□□□ -0.44
SMLR1-201ENST00000541421 NKX1-1Q15270 411 aaPredicted RBP12.28□□□□□ -0.44
SMLR1-201ENST00000541421 NEUROD6Q96NK8 337 aa12.28□□□□□ -0.44
SMLR1-201ENST00000541421 HELLSQ9NRZ9 838 aa12.28□□□□□ -0.44
SMLR1-201ENST00000541421 PAG1Q9NWQ8 432 aa12.28□□□□□ -0.44
SMLR1-201ENST00000541421 KCPQ6ZWJ8 1503 aa12.28□□□□□ -0.44
SMLR1-201ENST00000541421 A1BGP04217 495 aa12.28□□□□□ -0.44
SMLR1-201ENST00000541421 CHGBP05060 677 aa12.28□□□□□ -0.44
SMLR1-201ENST00000541421 Q6ZUG5 572 aa12.28□□□□□ -0.44
SMLR1-201ENST00000541421 ATG3Q9NT62 314 aa12.28□□□□□ -0.44
SMLR1-201ENST00000541421 TJP1Q07157 1748 aa12.27□□□□□ -0.44
SMLR1-201ENST00000541421 KDM4AO75164 1064 aa12.27□□□□□ -0.45
SMLR1-201ENST00000541421 FAM173BQ6P4H8 233 aa12.27□□□□□ -0.45
SMLR1-201ENST00000541421 PHLPP1O60346 1717 aa12.27□□□□□ -0.45
SMLR1-201ENST00000541421 EYA2O00167 538 aa12.27□□□□□ -0.45
SMLR1-201ENST00000541421 GOLIM4O00461 696 aa12.27□□□□□ -0.45
SMLR1-201ENST00000541421 CIAO1O76071 339 aa12.27□□□□□ -0.45
SMLR1-201ENST00000541421 ADCY5O95622 1261 aa12.27□□□□□ -0.45
SMLR1-201ENST00000541421 CCDC192P0DO97 292 aa12.27□□□□□ -0.45
SMLR1-201ENST00000541421 TIMM10P62072 90 aa12.27□□□□□ -0.45
SMLR1-201ENST00000541421 DSCC1Q9BVC3 393 aa12.27□□□□□ -0.45
SMLR1-201ENST00000541421 ZBTB3Q9H5J0 574 aa12.27□□□□□ -0.45
SMLR1-201ENST00000541421 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.27□□□□□ -0.45
SMLR1-201ENST00000541421 PAPPAQ13219 1627 aa12.26□□□□□ -0.45
SMLR1-201ENST00000541421 HSP90B1P14625 803 aaKnown RBP12.26□□□□□ -0.45
SMLR1-201ENST00000541421 SPATA32Q96LK8 384 aa12.26□□□□□ -0.45
SMLR1-201ENST00000541421 CCDC9Q9Y3X0 531 aaKnown RBP12.26□□□□□ -0.45
SMLR1-201ENST00000541421 COL5A2P05997 1499 aaPredicted RBP12.26□□□□□ -0.45
SMLR1-201ENST00000541421 GOLGA6L4A6NEF3 574 aa12.26□□□□□ -0.45
SMLR1-201ENST00000541421 JAK2O60674 1132 aa12.26□□□□□ -0.45
SMLR1-201ENST00000541421 IL2RBP14784 551 aa12.26□□□□□ -0.45
SMLR1-201ENST00000541421 KIAA2012Q0VF49 1180 aa12.26□□□□□ -0.45
SMLR1-201ENST00000541421 ZMYM1Q5SVZ6 1142 aa12.26□□□□□ -0.45
SMLR1-201ENST00000541421 BRF1Q92994 677 aa12.26□□□□□ -0.45
SMLR1-201ENST00000541421 NUP62CLQ9H1M0 184 aa12.26□□□□□ -0.45
SMLR1-201ENST00000541421 TNS2Q63HR2 1409 aa12.25□□□□□ -0.45
SMLR1-201ENST00000541421 FGD1P98174 961 aa12.25□□□□□ -0.45
SMLR1-201ENST00000541421 MAP3K11Q16584 847 aa12.25□□□□□ -0.45
SMLR1-201ENST00000541421 DHX32Q7L7V1 743 aaKnown RBP12.25□□□□□ -0.45
SMLR1-201ENST00000541421 LLPHQ9BRT6 129 aaKnown RBP12.25□□□□□ -0.45
SMLR1-201ENST00000541421 A0A1B0GUL7 405 aa12.25□□□□□ -0.45
SMLR1-201ENST00000541421 IFIT1P09914 478 aaKnown RBP12.25□□□□□ -0.45
SMLR1-201ENST00000541421 LIG1P18858 919 aa12.25□□□□□ -0.45
SMLR1-201ENST00000541421 LRRC24Q50LG9 513 aa12.25□□□□□ -0.45
SMLR1-201ENST00000541421 STOX1Q6ZVD7 989 aa12.25□□□□□ -0.45
SMLR1-201ENST00000541421 LEO1Q8WVC0 666 aaPredicted RBP12.25□□□□□ -0.45
SMLR1-201ENST00000541421 ZSCAN16Q9H4T2 348 aaPredicted RBP12.25□□□□□ -0.45
SMLR1-201ENST00000541421 TFIP11Q9UBB9 837 aaKnown RBP12.25□□□□□ -0.45
SMLR1-201ENST00000541421 R3HCC1Q9Y3T6 440 aaKnown RBP12.25□□□□□ -0.45
SMLR1-201ENST00000541421 SPEF2Q9C093 1822 aa12.24□□□□□ -0.45
SMLR1-201ENST00000541421 PFKFB2O60825 505 aa12.24□□□□□ -0.45
SMLR1-201ENST00000541421 SMARCC2Q8TAQ2 1214 aa12.24□□□□□ -0.45
SMLR1-201ENST00000541421 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.24□□□□□ -0.45
SMLR1-201ENST00000541421 CARD10Q9BWT7 1032 aa12.24□□□□□ -0.45
SMLR1-201ENST00000541421 H3BQV1 296 aa12.24□□□□□ -0.45
SMLR1-201ENST00000541421 SCRN1Q12765 414 aa12.24□□□□□ -0.45
SMLR1-201ENST00000541421 RESTQ13127 1097 aa12.24□□□□□ -0.45
SMLR1-201ENST00000541421 IFFO2Q5TF58 517 aa12.24□□□□□ -0.45
SMLR1-201ENST00000541421 ZNF594Q96JF6 807 aaPredicted RBP12.24□□□□□ -0.45
SMLR1-201ENST00000541421 DDX19AQ9NUU7 478 aaKnown RBP12.24□□□□□ -0.45
SMLR1-201ENST00000541421 COL22A1Q8NFW1 1626 aaPredicted RBP12.23□□□□□ -0.45
SMLR1-201ENST00000541421 RNF113AO15541 343 aaKnown RBP12.23□□□□□ -0.45
SMLR1-201ENST00000541421 RRP9O43818 475 aaKnown RBP12.23□□□□□ -0.45
SMLR1-201ENST00000541421 HSPA1LP34931 641 aa12.23□□□□□ -0.45
SMLR1-201ENST00000541421 ISCA1Q9BUE6 129 aa12.23□□□□□ -0.45
SMLR1-201ENST00000541421 LRRC2Q9BYS8 371 aa12.23□□□□□ -0.45
SMLR1-201ENST00000541421 AGXT2Q9BYV1 514 aa12.23□□□□□ -0.45
SMLR1-201ENST00000541421 TNMDQ9H2S6 317 aa12.23□□□□□ -0.45
SMLR1-201ENST00000541421 DACT1Q9NYF0 836 aa12.23□□□□□ -0.45
SMLR1-201ENST00000541421 CEP126Q9P2H0 1117 aa12.23□□□□□ -0.45
SMLR1-201ENST00000541421 FBXO3Q9UK99 471 aa12.23□□□□□ -0.45
SMLR1-201ENST00000541421 MAST3O60307 1309 aa12.23□□□□□ -0.45
SMLR1-201ENST00000541421 HSPD1P10809 573 aaKnown RBP12.22□□□□□ -0.45
SMLR1-201ENST00000541421 EXOSC10Q01780 885 aaKnown RBP12.22□□□□□ -0.45
SMLR1-201ENST00000541421 CCDC57Q2TAC2 916 aa12.22□□□□□ -0.45
SMLR1-201ENST00000541421 KIF3AQ9Y496 699 aa12.22□□□□□ -0.45
SMLR1-201ENST00000541421 HMGN5P82970 282 aaKnown RBP12.22□□□□□ -0.45
SMLR1-201ENST00000541421 TYRO3Q06418 890 aa12.22□□□□□ -0.45
SMLR1-201ENST00000541421 TCIRG1Q13488 830 aa12.22□□□□□ -0.45
SMLR1-201ENST00000541421 LRRFIP1Q32MZ4 808 aaKnown RBP12.22□□□□□ -0.45
SMLR1-201ENST00000541421 SLFNL1Q499Z3 407 aa12.22□□□□□ -0.45
SMLR1-201ENST00000541421 FAM200AQ8TCP9 573 aa12.22□□□□□ -0.45
SMLR1-201ENST00000541421 DDX11Q96FC9 970 aa12.22□□□□□ -0.45
SMLR1-201ENST00000541421 CFAP45Q9UL16 551 aa12.22□□□□□ -0.45
SMLR1-201ENST00000541421 ABCA3Q99758 1704 aa12.22□□□□□ -0.45
SMLR1-201ENST00000541421 E7EWF7 191 aa12.21□□□□□ -0.45
SMLR1-201ENST00000541421 PLCB2Q00722 1185 aa12.21□□□□□ -0.45
SMLR1-201ENST00000541421 TRIM28Q13263 835 aaKnown RBP12.21□□□□□ -0.45
SMLR1-201ENST00000541421 CAMK4Q16566 473 aa12.21□□□□□ -0.45
SMLR1-201ENST00000541421 NAA16Q6N069 864 aaPredicted RBP12.21□□□□□ -0.45
SMLR1-201ENST00000541421 RBM43Q6ZSC3 357 aaKnown RBP12.21□□□□□ -0.45
SMLR1-201ENST00000541421 NSUN7Q8NE18 718 aaKnown RBP12.21□□□□□ -0.45
SMLR1-201ENST00000541421 PUS3Q9BZE2 481 aaKnown RBP12.21□□□□□ -0.45
SMLR1-201ENST00000541421 AKAP2Q9Y2D5 859 aa12.21□□□□□ -0.45
SMLR1-201ENST00000541421 LAMA4Q16363 1823 aa12.21□□□□□ -0.45
SMLR1-201ENST00000541421 SHANK3Q9BYB0 1731 aa12.21□□□□□ -0.45
SMLR1-201ENST00000541421 HSP90AA2PQ14568 343 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms