RNA–Protein interactions for RNA: ENST00000540768.5

NUP85-203, Transcript of nucleoporin 85, humanhuman

TSL 2 BASIC

Gene NUP85, Length 1,926 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-203ENST00000540768 GPR108Q9NPR9 543 aa11.84□□□□□ -0.51
NUP85-203ENST00000540768 NDUFB9Q9Y6M9 179 aa11.84□□□□□ -0.51
NUP85-203ENST00000540768 TOB2Q14106 344 aaPredicted RBP11.83□□□□□ -0.52
NUP85-203ENST00000540768 ANKRD1Q15327 319 aa11.83□□□□□ -0.52
NUP85-203ENST00000540768 BLOC1S2Q6QNY1 142 aa11.83□□□□□ -0.52
NUP85-203ENST00000540768 NECAB1Q8N987 351 aa11.83□□□□□ -0.52
NUP85-203ENST00000540768 ATP6V1DQ9Y5K8 247 aa11.83□□□□□ -0.52
NUP85-203ENST00000540768 TRIM37O94972 964 aa11.82□□□□□ -0.52
NUP85-203ENST00000540768 CHGBP05060 677 aa11.82□□□□□ -0.52
NUP85-203ENST00000540768 FAM196AQ6ZSG2 479 aa11.82□□□□□ -0.52
NUP85-203ENST00000540768 TOGARAM1Q9Y4F4 1720 aa11.82□□□□□ -0.52
NUP85-203ENST00000540768 COL14A1Q05707 1796 aaKnown RBP11.82□□□□□ -0.52
NUP85-203ENST00000540768 DTNBO60941 627 aa11.82□□□□□ -0.52
NUP85-203ENST00000540768 MCMDC2Q4G0Z9 681 aa11.82□□□□□ -0.52
NUP85-203ENST00000540768 KBTBD3Q8NAB2 608 aa11.82□□□□□ -0.52
NUP85-203ENST00000540768 DNAJC2Q99543 621 aaKnown RBP11.82□□□□□ -0.52
NUP85-203ENST00000540768 ISCA1Q9BUE6 129 aa11.82□□□□□ -0.52
NUP85-203ENST00000540768 ZBTB3Q9H5J0 574 aa11.82□□□□□ -0.52
NUP85-203ENST00000540768 PALLDQ8WX93 1383 aa11.81□□□□□ -0.52
NUP85-203ENST00000540768 SH3TC1Q8TE82 1336 aa11.81□□□□□ -0.52
NUP85-203ENST00000540768 CIAO1O76071 339 aa11.81□□□□□ -0.52
NUP85-203ENST00000540768 IL15P40933 162 aaPredicted RBP11.81□□□□□ -0.52
NUP85-203ENST00000540768 UBE2HP62256 183 aa11.81□□□□□ -0.52
NUP85-203ENST00000540768 KRT32Q14532 448 aa11.81□□□□□ -0.52
NUP85-203ENST00000540768 HS1BP3Q53T59 392 aa11.81□□□□□ -0.52
NUP85-203ENST00000540768 CCDC129Q6ZRS4 1044 aa11.81□□□□□ -0.52
NUP85-203ENST00000540768 TCEANC2Q96MN5 208 aa11.81□□□□□ -0.52
NUP85-203ENST00000540768 SEC62Q99442 399 aaKnown RBP11.81□□□□□ -0.52
NUP85-203ENST00000540768 TSPY26PQ9H489 355 aa11.81□□□□□ -0.52
NUP85-203ENST00000540768 ATG3Q9NT62 314 aa11.81□□□□□ -0.52
NUP85-203ENST00000540768 CHMP3Q9Y3E7 222 aa11.81□□□□□ -0.52
NUP85-203ENST00000540768 U3KPZ7 1027 aaPredicted RBP11.81□□□□□ -0.52
NUP85-203ENST00000540768 BRWD3Q6RI45 1802 aa11.81□□□□□ -0.52
NUP85-203ENST00000540768 EYA2O00167 538 aa11.8□□□□□ -0.52
NUP85-203ENST00000540768 PHF14O94880 888 aa11.8□□□□□ -0.52
NUP85-203ENST00000540768 PDIA4P13667 645 aaKnown RBP11.8□□□□□ -0.52
NUP85-203ENST00000540768 R3HDM1Q15032 1099 aaKnown RBP11.8□□□□□ -0.52
NUP85-203ENST00000540768 LRRC24Q50LG9 513 aa11.8□□□□□ -0.52
NUP85-203ENST00000540768 BARGINQ6ZT62 677 aa11.8□□□□□ -0.52
NUP85-203ENST00000540768 DDX46Q7L014 1031 aaKnown RBP11.8□□□□□ -0.52
NUP85-203ENST00000540768 TICAM2Q86XR7 235 aa11.8□□□□□ -0.52
NUP85-203ENST00000540768 ANO8Q9HCE9 1232 aaPredicted RBP11.8□□□□□ -0.52
NUP85-203ENST00000540768 APBA3O96018 575 aa11.8□□□□□ -0.52
NUP85-203ENST00000540768 TIMM10P62072 90 aa11.8□□□□□ -0.52
NUP85-203ENST00000540768 DNM1Q05193 864 aaKnown RBP11.8□□□□□ -0.52
NUP85-203ENST00000540768 EZH2Q15910 746 aaKnown RBP11.8□□□□□ -0.52
NUP85-203ENST00000540768 CCDC183Q5T5S1 534 aa11.8□□□□□ -0.52
NUP85-203ENST00000540768 ZSCAN30Q86W11 494 aa11.8□□□□□ -0.52
NUP85-203ENST00000540768 CYP21A2P08686 494 aa11.79□□□□□ -0.52
NUP85-203ENST00000540768 TRIM28Q13263 835 aaKnown RBP11.79□□□□□ -0.52
NUP85-203ENST00000540768 TCIRG1Q13488 830 aa11.79□□□□□ -0.52
NUP85-203ENST00000540768 LARP1BQ659C4 914 aaKnown RBP11.79□□□□□ -0.52
NUP85-203ENST00000540768 ZNF594Q96JF6 807 aaPredicted RBP11.79□□□□□ -0.52
NUP85-203ENST00000540768 NEUROD6Q96NK8 337 aa11.79□□□□□ -0.52
NUP85-203ENST00000540768 NEK1Q96PY6 1258 aa11.79□□□□□ -0.52
NUP85-203ENST00000540768 PAG1Q9NWQ8 432 aa11.79□□□□□ -0.52
NUP85-203ENST00000540768 NRAPQ86VF7 1730 aa11.79□□□□□ -0.52
NUP85-203ENST00000540768 FIBPO43427 364 aa11.78□□□□□ -0.52
NUP85-203ENST00000540768 HELLSQ9NRZ9 838 aa11.78□□□□□ -0.52
NUP85-203ENST00000540768 TMOD3Q9NYL9 352 aa11.78□□□□□ -0.52
NUP85-203ENST00000540768 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.78□□□□□ -0.52
NUP85-203ENST00000540768 VPS37CA5D8V6 355 aaPredicted RBP11.78□□□□□ -0.52
NUP85-203ENST00000540768 GOLIM4O00461 696 aa11.78□□□□□ -0.52
NUP85-203ENST00000540768 LETM1O95202 739 aaPredicted RBP11.78□□□□□ -0.52
NUP85-203ENST00000540768 PDCP20941 246 aa11.78□□□□□ -0.52
NUP85-203ENST00000540768 CSPP1Q1MSJ5 1256 aa11.78□□□□□ -0.52
NUP85-203ENST00000540768 ZMYM1Q5SVZ6 1142 aa11.78□□□□□ -0.52
NUP85-203ENST00000540768 CDC37L1Q7L3B6 337 aa11.78□□□□□ -0.52
NUP85-203ENST00000540768 VSIG10Q8N0Z9 540 aa11.78□□□□□ -0.52
NUP85-203ENST00000540768 KLHL34Q8N239 644 aa11.78□□□□□ -0.52
NUP85-203ENST00000540768 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.78□□□□□ -0.52
NUP85-203ENST00000540768 CAMKK2Q96RR4 588 aa11.78□□□□□ -0.52
NUP85-203ENST00000540768 PUS3Q9BZE2 481 aaKnown RBP11.78□□□□□ -0.52
NUP85-203ENST00000540768 A0A1B0GUL7 405 aa11.77□□□□□ -0.53
NUP85-203ENST00000540768 SLFNL1Q499Z3 407 aa11.77□□□□□ -0.53
NUP85-203ENST00000540768 STOX1Q6ZVD7 989 aa11.77□□□□□ -0.53
NUP85-203ENST00000540768 RNF214Q8ND24 703 aa11.77□□□□□ -0.53
NUP85-203ENST00000540768 PIGBQ92521 554 aa11.77□□□□□ -0.53
NUP85-203ENST00000540768 DSCC1Q9BVC3 393 aa11.77□□□□□ -0.53
NUP85-203ENST00000540768 PLA2G12BQ9BX93 195 aa11.77□□□□□ -0.53
NUP85-203ENST00000540768 ASAP1Q9ULH1 1129 aa11.77□□□□□ -0.53
NUP85-203ENST00000540768 THRAP3Q9Y2W1 955 aaKnown RBP11.77□□□□□ -0.53
NUP85-203ENST00000540768 SPEF2Q9C093 1822 aa11.77□□□□□ -0.53
NUP85-203ENST00000540768 DNAJC10Q8IXB1 793 aa11.76□□□□□ -0.53
NUP85-203ENST00000540768 GTF3C6Q969F1 213 aa11.76□□□□□ -0.53
NUP85-203ENST00000540768 TEX13AQ9BXU3 409 aaPredicted RBP11.76□□□□□ -0.53
NUP85-203ENST00000540768 FBXO3Q9UK99 471 aa11.76□□□□□ -0.53
NUP85-203ENST00000540768 NOL7Q9UMY1 257 aaKnown RBP11.76□□□□□ -0.53
NUP85-203ENST00000540768 PCCAP05165 728 aaPredicted RBP11.76□□□□□ -0.53
NUP85-203ENST00000540768 CSF1RP07333 972 aa11.76□□□□□ -0.53
NUP85-203ENST00000540768 IFIT1P09914 478 aaKnown RBP11.76□□□□□ -0.53
NUP85-203ENST00000540768 Q6ZUG5 572 aa11.76□□□□□ -0.53
NUP85-203ENST00000540768 FUCA2Q9BTY2 467 aa11.76□□□□□ -0.53
NUP85-203ENST00000540768 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.76□□□□□ -0.53
NUP85-203ENST00000540768 DISP2A7MBM2 1401 aa11.75□□□□□ -0.53
NUP85-203ENST00000540768 RNF113AO15541 343 aaKnown RBP11.75□□□□□ -0.53
NUP85-203ENST00000540768 STK3Q13188 491 aa11.75□□□□□ -0.53
NUP85-203ENST00000540768 UVSSAQ2YD98 709 aa11.75□□□□□ -0.53
NUP85-203ENST00000540768 TTC6Q86TZ1 520 aa11.75□□□□□ -0.53
NUP85-203ENST00000540768 FAM184AQ8NB25 1140 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms