RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 EIF2S2P20042 333 aaKnown RBP7.04□□□□□ -1.28
PTPRD-214ENST00000540109 MAP2K2P36507 400 aa7.04□□□□□ -1.28
PTPRD-214ENST00000540109 CCDC50Q8IVM0 306 aa7.04□□□□□ -1.28
PTPRD-214ENST00000540109 CEP120Q8N960 986 aa7.04□□□□□ -1.28
PTPRD-214ENST00000540109 LRRC59Q96AG4 307 aaKnown RBP7.04□□□□□ -1.28
PTPRD-214ENST00000540109 ADCY9O60503 1353 aa7.03□□□□□ -1.28
PTPRD-214ENST00000540109 SMC2O95347 1197 aa7.03□□□□□ -1.28
PTPRD-214ENST00000540109 CLEC17AQ6ZS10 378 aa7.03□□□□□ -1.28
PTPRD-214ENST00000540109 LGR6Q9HBX8 967 aa7.03□□□□□ -1.28
PTPRD-214ENST00000540109 CCDC171Q6TFL3 1326 aa7.03□□□□□ -1.28
PTPRD-214ENST00000540109 PI4KAP2A4QPH2 592 aa7.03□□□□□ -1.28
PTPRD-214ENST00000540109 AKAP17AQ02040 695 aaKnown RBP7.03□□□□□ -1.28
PTPRD-214ENST00000540109 TUBB2AQ13885 445 aa7.03□□□□□ -1.28
PTPRD-214ENST00000540109 PI4KAP1Q8N8J0 262 aa7.03□□□□□ -1.28
PTPRD-214ENST00000540109 RHPN1Q8TCX5 695 aa7.03□□□□□ -1.28
PTPRD-214ENST00000540109 GTF3C6Q969F1 213 aa7.03□□□□□ -1.28
PTPRD-214ENST00000540109 TUBB2BQ9BVA1 445 aa7.03□□□□□ -1.28
PTPRD-214ENST00000540109 WDR33Q9C0J8 1336 aaKnown RBP7.03□□□□□ -1.28
PTPRD-214ENST00000540109 SRGAP3O43295 1099 aa7.03□□□□□ -1.28
PTPRD-214ENST00000540109 GSDMDP57764 484 aa7.03□□□□□ -1.28
PTPRD-214ENST00000540109 NKX1-1Q15270 411 aaPredicted RBP7.03□□□□□ -1.28
PTPRD-214ENST00000540109 KLHL40Q2TBA0 621 aa7.03□□□□□ -1.28
PTPRD-214ENST00000540109 PPP1R42Q7Z4L9 355 aa7.03□□□□□ -1.28
PTPRD-214ENST00000540109 CARD10Q9BWT7 1032 aa7.03□□□□□ -1.28
PTPRD-214ENST00000540109 RBM27Q9P2N5 1060 aaKnown RBP7.03□□□□□ -1.28
PTPRD-214ENST00000540109 SURF6O75683 361 aaKnown RBP7.03□□□□□ -1.28
PTPRD-214ENST00000540109 KDM6AO15550 1401 aaPredicted RBP7.03□□□□□ -1.28
PTPRD-214ENST00000540109 LRP6O75581 1613 aa7.03□□□□□ -1.28
PTPRD-214ENST00000540109 GRM8O00222 908 aa7.03□□□□□ -1.28
PTPRD-214ENST00000540109 FIBPO43427 364 aa7.03□□□□□ -1.28
PTPRD-214ENST00000540109 SSFA2P28290 1259 aa7.03□□□□□ -1.28
PTPRD-214ENST00000540109 ESYT1Q9BSJ8 1104 aa7.03□□□□□ -1.28
PTPRD-214ENST00000540109 A0A1B0GUA9 196 aa7.02□□□□□ -1.29
PTPRD-214ENST00000540109 H3BQV1 296 aa7.02□□□□□ -1.29
PTPRD-214ENST00000540109 CABP4P57796 275 aa7.02□□□□□ -1.29
PTPRD-214ENST00000540109 G3BP1Q13283 466 aaKnown RBP eCLIP7.02□□□□□ -1.29
PTPRD-214ENST00000540109 PPP2R5AQ15172 486 aa7.02□□□□□ -1.29
PTPRD-214ENST00000540109 IFFO2Q5TF58 517 aa7.02□□□□□ -1.29
PTPRD-214ENST00000540109 KIF18AQ8NI77 898 aa7.02□□□□□ -1.29
PTPRD-214ENST00000540109 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.02□□□□□ -1.29
PTPRD-214ENST00000540109 TRMT1Q9NXH9 659 aaKnown RBP7.02□□□□□ -1.29
PTPRD-214ENST00000540109 SYCP1Q15431 976 aa7.02□□□□□ -1.29
PTPRD-214ENST00000540109 CEP57Q86XR8 500 aa7.02□□□□□ -1.29
PTPRD-214ENST00000540109 MEGF6O75095 1541 aa7.02□□□□□ -1.29
PTPRD-214ENST00000540109 INTS4Q96HW7 963 aaKnown RBP7.02□□□□□ -1.29
PTPRD-214ENST00000540109 METTL22Q9BUU2 404 aaPredicted RBP7.02□□□□□ -1.29
PTPRD-214ENST00000540109 CDCA7Q9BWT1 371 aaPredicted RBP7.02□□□□□ -1.29
PTPRD-214ENST00000540109 PRDM11Q9NQV5 511 aa7.02□□□□□ -1.29
PTPRD-214ENST00000540109 MAP3K2Q9Y2U5 619 aa7.02□□□□□ -1.29
PTPRD-214ENST00000540109 ABCA3Q99758 1704 aa7.02□□□□□ -1.29
PTPRD-214ENST00000540109 TUBGCP6Q96RT7 1819 aa7.02□□□□□ -1.29
PTPRD-214ENST00000540109 ZSCAN12O43309 604 aa7.02□□□□□ -1.29
PTPRD-214ENST00000540109 DDIT3P35638 169 aa7.02□□□□□ -1.29
PTPRD-214ENST00000540109 CPLX2Q6PUV4 134 aaKnown RBP7.02□□□□□ -1.29
PTPRD-214ENST00000540109 RIC3Q7Z5B4 369 aa7.02□□□□□ -1.29
PTPRD-214ENST00000540109 FMNL3Q8IVF7 1028 aa7.02□□□□□ -1.29
PTPRD-214ENST00000540109 CCDC83Q8IWF9 413 aa7.02□□□□□ -1.29
PTPRD-214ENST00000540109 PAPPAQ13219 1627 aa7.02□□□□□ -1.29
PTPRD-214ENST00000540109 ANKRD18BA2A2Z9 1011 aa7.02□□□□□ -1.29
PTPRD-214ENST00000540109 ADCY5O95622 1261 aa7.02□□□□□ -1.29
PTPRD-214ENST00000540109 ENOX2Q16206 610 aaKnown RBP7.02□□□□□ -1.29
PTPRD-214ENST00000540109 BRINP3Q76B58 766 aa7.02□□□□□ -1.29
PTPRD-214ENST00000540109 LUC7LQ9NQ29 371 aaKnown RBP7.02□□□□□ -1.29
PTPRD-214ENST00000540109 IFIT2P09913 472 aaKnown RBP7.01□□□□□ -1.29
PTPRD-214ENST00000540109 NAA25Q14CX7 972 aa7.01□□□□□ -1.29
PTPRD-214ENST00000540109 RAB3GAP1Q15042 981 aa7.01□□□□□ -1.29
PTPRD-214ENST00000540109 CCDC73Q6ZRK6 1079 aa7.01□□□□□ -1.29
PTPRD-214ENST00000540109 TTC12Q9H892 705 aaPredicted RBP7.01□□□□□ -1.29
PTPRD-214ENST00000540109 XIRP1Q702N8 1843 aaKnown RBP7.01□□□□□ -1.29
PTPRD-214ENST00000540109 ZC3H6P61129 1189 aaKnown RBP7.01□□□□□ -1.29
PTPRD-214ENST00000540109 SPATS2Q86XZ4 545 aaKnown RBP7.01□□□□□ -1.29
PTPRD-214ENST00000540109 CCDC47Q96A33 483 aaKnown RBP7.01□□□□□ -1.29
PTPRD-214ENST00000540109 ECHDC1Q9NTX5 307 aa7.01□□□□□ -1.29
PTPRD-214ENST00000540109 COL5A2P05997 1499 aaPredicted RBP7.01□□□□□ -1.29
PTPRD-214ENST00000540109 COL14A1Q05707 1796 aaKnown RBP7.01□□□□□ -1.29
PTPRD-214ENST00000540109 ZCRB1Q8TBF4 217 aaKnown RBP7.01□□□□□ -1.29
PTPRD-214ENST00000540109 SMARCE1Q969G3 411 aa7.01□□□□□ -1.29
PTPRD-214ENST00000540109 RILPL2Q969X0 211 aa7.01□□□□□ -1.29
PTPRD-214ENST00000540109 EVI5LQ96CN4 794 aa7.01□□□□□ -1.29
PTPRD-214ENST00000540109 PHAXQ9H814 394 aaKnown RBP7.01□□□□□ -1.29
PTPRD-214ENST00000540109 EXOC6BQ9Y2D4 811 aa7.01□□□□□ -1.29
PTPRD-214ENST00000540109 IL2RBP14784 551 aa7.01□□□□□ -1.29
PTPRD-214ENST00000540109 CHMLP26374 656 aa7.01□□□□□ -1.29
PTPRD-214ENST00000540109 CCDC38Q502W7 563 aa7.01□□□□□ -1.29
PTPRD-214ENST00000540109 PLBD2Q8NHP8 589 aa7.01□□□□□ -1.29
PTPRD-214ENST00000540109 SLAIN2Q9P270 581 aa7.01□□□□□ -1.29
PTPRD-214ENST00000540109 DACH1Q9UI36 760 aa7.01□□□□□ -1.29
PTPRD-214ENST00000540109 RGPD5Q99666 1765 aa7.01□□□□□ -1.29
PTPRD-214ENST00000540109 CAPN2P17655 700 aa7□□□□□ -1.29
PTPRD-214ENST00000540109 ZSCAN23Q3MJ62 389 aa7□□□□□ -1.29
PTPRD-214ENST00000540109 ARMCX6Q7L4S7 300 aa7□□□□□ -1.29
PTPRD-214ENST00000540109 PLCH1Q4KWH8 1693 aa7□□□□□ -1.29
PTPRD-214ENST00000540109 ZKSCAN1P17029 563 aaPredicted RBP7□□□□□ -1.29
PTPRD-214ENST00000540109 AXIN2Q9Y2T1 843 aa7□□□□□ -1.29
PTPRD-214ENST00000540109 PNMA6EA0A0J9YXQ4 647 aa7□□□□□ -1.29
PTPRD-214ENST00000540109 CTAGE5O15320 804 aa7□□□□□ -1.29
PTPRD-214ENST00000540109 MYRIPQ8NFW9 859 aa7□□□□□ -1.29
PTPRD-214ENST00000540109 MIPOL1Q8TD10 442 aa7□□□□□ -1.29
PTPRD-214ENST00000540109 GPR108Q9NPR9 543 aa7□□□□□ -1.29
PTPRD-214ENST00000540109 UBR2Q8IWV8 1755 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 2787.3 ms