RNA–Protein interactions for RNA: ENST00000539469.6

PDZRN4-203, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best) BASIC

Gene PDZRN4, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-203ENST00000539469 C9orf131Q5VYM1 1079 aa7.49□□□□□ -1.21
PDZRN4-203ENST00000539469 SIRT2Q8IXJ6 389 aa7.49□□□□□ -1.21
PDZRN4-203ENST00000539469 MYD88Q99836 296 aa7.49□□□□□ -1.21
PDZRN4-203ENST00000539469 USP44Q9H0E7 712 aa7.49□□□□□ -1.21
PDZRN4-203ENST00000539469 ZBTB3Q9H5J0 574 aa7.49□□□□□ -1.21
PDZRN4-203ENST00000539469 LRRC4BQ9NT99 713 aa7.49□□□□□ -1.21
PDZRN4-203ENST00000539469 CLEC11AQ9Y240 323 aa7.49□□□□□ -1.21
PDZRN4-203ENST00000539469 ANKRD13DQ6ZTN6 518 aa7.49□□□□□ -1.21
PDZRN4-203ENST00000539469 RIC3Q7Z5B4 369 aa7.49□□□□□ -1.21
PDZRN4-203ENST00000539469 SRCIN1Q9C0H9 1055 aa7.49□□□□□ -1.21
PDZRN4-203ENST00000539469 CCDC87Q9NVE4 849 aa7.49□□□□□ -1.21
PDZRN4-203ENST00000539469 NBPF7P0C2Y1 421 aaPredicted RBP7.48□□□□□ -1.21
PDZRN4-203ENST00000539469 XRCC6P12956 609 aaKnown RBP eCLIP7.48□□□□□ -1.21
PDZRN4-203ENST00000539469 PLBD2Q8NHP8 589 aa7.48□□□□□ -1.21
PDZRN4-203ENST00000539469 PHOX2BQ99453 314 aa7.48□□□□□ -1.21
PDZRN4-203ENST00000539469 METTL22Q9BUU2 404 aaPredicted RBP7.48□□□□□ -1.21
PDZRN4-203ENST00000539469 CCNL1Q9UK58 526 aaPredicted RBP7.48□□□□□ -1.21
PDZRN4-203ENST00000539469 DDX60Q8IY21 1712 aaKnown RBP7.48□□□□□ -1.21
PDZRN4-203ENST00000539469 LAMB2P55268 1798 aa7.48□□□□□ -1.21
PDZRN4-203ENST00000539469 ATP5J2-PTCD1G3V325 749 aa7.48□□□□□ -1.21
PDZRN4-203ENST00000539469 DDX58O95786 925 aaKnown RBP7.48□□□□□ -1.21
PDZRN4-203ENST00000539469 CREBZFQ9NS37 354 aa7.48□□□□□ -1.21
PDZRN4-203ENST00000539469 COL24A1Q17RW2 1714 aa7.48□□□□□ -1.21
PDZRN4-203ENST00000539469 COL15A1P39059 1388 aa7.48□□□□□ -1.21
PDZRN4-203ENST00000539469 MYH3P11055 1940 aa7.48□□□□□ -1.21
PDZRN4-203ENST00000539469 NEURL1BA8MQ27 555 aa7.47□□□□□ -1.21
PDZRN4-203ENST00000539469 SSTR3P32745 418 aaPredicted RBP7.47□□□□□ -1.21
PDZRN4-203ENST00000539469 SCNN1AP37088 669 aa7.47□□□□□ -1.21
PDZRN4-203ENST00000539469 EIF5P55010 431 aaKnown RBP7.47□□□□□ -1.21
PDZRN4-203ENST00000539469 HLFQ16534 295 aa7.47□□□□□ -1.21
PDZRN4-203ENST00000539469 CENPQQ7L2Z9 268 aaPredicted RBP7.47□□□□□ -1.21
PDZRN4-203ENST00000539469 PRDM10Q9NQV6 1147 aa7.47□□□□□ -1.21
PDZRN4-203ENST00000539469 RBM27Q9P2N5 1060 aaKnown RBP7.47□□□□□ -1.21
PDZRN4-203ENST00000539469 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.47□□□□□ -1.21
PDZRN4-203ENST00000539469 PPME1Q9Y570 386 aa7.47□□□□□ -1.21
PDZRN4-203ENST00000539469 IL6STP40189 918 aaPredicted RBP7.47□□□□□ -1.21
PDZRN4-203ENST00000539469 AAMPQ13685 434 aa7.47□□□□□ -1.21
PDZRN4-203ENST00000539469 MYSM1Q5VVJ2 828 aa7.47□□□□□ -1.21
PDZRN4-203ENST00000539469 CEP85Q6P2H3 762 aa7.47□□□□□ -1.21
PDZRN4-203ENST00000539469 RIPOR2Q9Y4F9 1068 aa7.47□□□□□ -1.21
PDZRN4-203ENST00000539469 MAP3K15Q6ZN16 1313 aa7.47□□□□□ -1.21
PDZRN4-203ENST00000539469 CNTNAP4Q9C0A0 1308 aa7.47□□□□□ -1.21
PDZRN4-203ENST00000539469 GOLGA6L3A6NEY3 463 aa7.46□□□□□ -1.21
PDZRN4-203ENST00000539469 CSPP1Q1MSJ5 1256 aa7.46□□□□□ -1.21
PDZRN4-203ENST00000539469 TSR1Q2NL82 804 aaKnown RBP7.46□□□□□ -1.21
PDZRN4-203ENST00000539469 PPP1R15BQ5SWA1 713 aa7.46□□□□□ -1.21
PDZRN4-203ENST00000539469 LINS1Q8NG48 757 aa7.46□□□□□ -1.21
PDZRN4-203ENST00000539469 JARID2Q92833 1246 aaPredicted RBP7.46□□□□□ -1.21
PDZRN4-203ENST00000539469 LRRFIP2Q9Y608 721 aaKnown RBP7.46□□□□□ -1.21
PDZRN4-203ENST00000539469 ALDH1L1O75891 902 aa7.46□□□□□ -1.22
PDZRN4-203ENST00000539469 DPH6Q7L8W6 267 aa7.46□□□□□ -1.22
PDZRN4-203ENST00000539469 UBXN4Q92575 508 aa7.46□□□□□ -1.22
PDZRN4-203ENST00000539469 KAZALD1Q96I82 304 aa7.46□□□□□ -1.22
PDZRN4-203ENST00000539469 HDAC1Q13547 482 aaPredicted RBP7.46□□□□□ -1.22
PDZRN4-203ENST00000539469 GCKRQ14397 625 aa7.46□□□□□ -1.22
PDZRN4-203ENST00000539469 DZIP3Q86Y13 1208 aaKnown RBP7.46□□□□□ -1.22
PDZRN4-203ENST00000539469 PPP1R12CQ9BZL4 782 aa7.46□□□□□ -1.22
PDZRN4-203ENST00000539469 UTYO14607 1347 aa7.45□□□□□ -1.22
PDZRN4-203ENST00000539469 SPEF2Q9C093 1822 aa7.45□□□□□ -1.22
PDZRN4-203ENST00000539469 PNMA6EA0A0J9YXQ4 647 aa7.45□□□□□ -1.22
PDZRN4-203ENST00000539469 HIC1Q14526 733 aa7.45□□□□□ -1.22
PDZRN4-203ENST00000539469 L1TD1Q5T7N2 865 aaKnown RBP7.45□□□□□ -1.22
PDZRN4-203ENST00000539469 KIF6Q6ZMV9 814 aa7.45□□□□□ -1.22
PDZRN4-203ENST00000539469 SUCLG2Q96I99 432 aa7.45□□□□□ -1.22
PDZRN4-203ENST00000539469 IBTKQ9P2D0 1353 aaPredicted RBP7.45□□□□□ -1.22
PDZRN4-203ENST00000539469 PALM3A6NDB9 673 aaPredicted RBP7.45□□□□□ -1.22
PDZRN4-203ENST00000539469 CAMTA2O94983 1202 aa7.45□□□□□ -1.22
PDZRN4-203ENST00000539469 GNAI2P04899 355 aa7.45□□□□□ -1.22
PDZRN4-203ENST00000539469 UBTFL1P0CB47 393 aaPredicted RBP7.45□□□□□ -1.22
PDZRN4-203ENST00000539469 CASP7P55210 303 aa7.45□□□□□ -1.22
PDZRN4-203ENST00000539469 ANKRD44Q8N8A2 993 aa7.45□□□□□ -1.22
PDZRN4-203ENST00000539469 MS4A4AQ96JQ5 239 aa7.45□□□□□ -1.22
PDZRN4-203ENST00000539469 ISCA1Q9BUE6 129 aa7.45□□□□□ -1.22
PDZRN4-203ENST00000539469 KLHL42Q9P2K6 505 aa7.45□□□□□ -1.22
PDZRN4-203ENST00000539469 UBN2Q6ZU65 1347 aa7.45□□□□□ -1.22
PDZRN4-203ENST00000539469 GRM8O00222 908 aa7.44□□□□□ -1.22
PDZRN4-203ENST00000539469 PEX14O75381 377 aa7.44□□□□□ -1.22
PDZRN4-203ENST00000539469 GNAI3P08754 354 aa7.44□□□□□ -1.22
PDZRN4-203ENST00000539469 NEXNQ0ZGT2 675 aa7.44□□□□□ -1.22
PDZRN4-203ENST00000539469 EPHA10Q5JZY3 1008 aa7.44□□□□□ -1.22
PDZRN4-203ENST00000539469 COL4A1P02462 1669 aa7.44□□□□□ -1.22
PDZRN4-203ENST00000539469 QSER1Q2KHR3 1735 aa7.44□□□□□ -1.22
PDZRN4-203ENST00000539469 APBA3O96018 575 aa7.44□□□□□ -1.22
PDZRN4-203ENST00000539469 TCIRG1Q13488 830 aa7.44□□□□□ -1.22
PDZRN4-203ENST00000539469 TXNRD1Q16881 649 aa7.44□□□□□ -1.22
PDZRN4-203ENST00000539469 TSNAXIP1Q2TAA8 658 aa7.44□□□□□ -1.22
PDZRN4-203ENST00000539469 GPATCH3Q96I76 525 aa7.44□□□□□ -1.22
PDZRN4-203ENST00000539469 ZC3H4Q9UPT8 1303 aaKnown RBP7.44□□□□□ -1.22
PDZRN4-203ENST00000539469 TNRC6CQ9HCJ0 1690 aaKnown RBP7.44□□□□□ -1.22
PDZRN4-203ENST00000539469 GPTP24298 496 aa7.44□□□□□ -1.22
PDZRN4-203ENST00000539469 CLK2P49760 499 aaKnown RBP7.44□□□□□ -1.22
PDZRN4-203ENST00000539469 BECN1Q14457 450 aa7.44□□□□□ -1.22
PDZRN4-203ENST00000539469 RC3H1Q5TC82 1133 aaKnown RBP7.44□□□□□ -1.22
PDZRN4-203ENST00000539469 DDX12PQ92771 950 aa7.44□□□□□ -1.22
PDZRN4-203ENST00000539469 CHMP4BQ9H444 224 aaKnown RBP7.44□□□□□ -1.22
PDZRN4-203ENST00000539469 RWDD1Q9H446 243 aaPredicted RBP7.44□□□□□ -1.22
PDZRN4-203ENST00000539469 BCL2L12Q9HB09 334 aa7.44□□□□□ -1.22
PDZRN4-203ENST00000539469 C9orf78Q9NZ63 289 aaPredicted RBP7.44□□□□□ -1.22
PDZRN4-203ENST00000539469 SRP68Q9UHB9 627 aaKnown RBP7.44□□□□□ -1.22
PDZRN4-203ENST00000539469 FARP1Q9Y4F1 1045 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms