RNA–Protein interactions for RNA: ENST00000538036.1

VPS37C-204, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 506 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-204ENST00000538036 FKBP1BP68106 108 aa13.32□□□□□ -0.28
VPS37C-204ENST00000538036 RALBP1Q15311 655 aa13.32□□□□□ -0.28
VPS37C-204ENST00000538036 KIF4BQ2VIQ3 1234 aa13.32□□□□□ -0.28
VPS37C-204ENST00000538036 HDGFL1Q5TGJ6 251 aa13.32□□□□□ -0.28
VPS37C-204ENST00000538036 DLK2Q6UY11 383 aa13.32□□□□□ -0.28
VPS37C-204ENST00000538036 RTL9Q8NET4 1388 aa13.32□□□□□ -0.28
VPS37C-204ENST00000538036 LRRC37AA6NMS7 1700 aa13.31□□□□□ -0.28
VPS37C-204ENST00000538036 LAMB2P55268 1798 aa13.31□□□□□ -0.28
VPS37C-204ENST00000538036 ADM5C9JUS6 153 aa13.31□□□□□ -0.28
VPS37C-204ENST00000538036 ATP5J2-PTCD1G3V325 749 aa13.31□□□□□ -0.28
VPS37C-204ENST00000538036 G3V3G9 751 aa13.31□□□□□ -0.28
VPS37C-204ENST00000538036 IRS4O14654 1257 aaPredicted RBP13.31□□□□□ -0.28
VPS37C-204ENST00000538036 SLC10A3P09131 477 aa13.31□□□□□ -0.28
VPS37C-204ENST00000538036 ZNF280AP59817 542 aaPredicted RBP13.31□□□□□ -0.28
VPS37C-204ENST00000538036 DOK7Q18PE1 504 aa13.31□□□□□ -0.28
VPS37C-204ENST00000538036 DCAF8Q5TAQ9 597 aa13.31□□□□□ -0.28
VPS37C-204ENST00000538036 AGBL3Q8NEM8 1001 aa13.31□□□□□ -0.28
VPS37C-204ENST00000538036 CSRNP1Q96S65 589 aa13.31□□□□□ -0.28
VPS37C-204ENST00000538036 KCNQ5Q9NR82 932 aa13.31□□□□□ -0.28
VPS37C-204ENST00000538036 GGA3Q9NZ52 723 aa13.3□□□□□ -0.28
VPS37C-204ENST00000538036 PDE4DIPQ5VU43 2346 aa13.3□□□□□ -0.28
VPS37C-204ENST00000538036 ZNF609O15014 1411 aa13.3□□□□□ -0.28
VPS37C-204ENST00000538036 PKN2Q16513 984 aaKnown RBP13.29□□□□□ -0.28
VPS37C-204ENST00000538036 KRT24Q2M2I5 525 aa13.29□□□□□ -0.28
VPS37C-204ENST00000538036 CTU1Q7Z7A3 348 aaKnown RBP13.29□□□□□ -0.28
VPS37C-204ENST00000538036 ZBTB38Q8NAP3 1195 aaPredicted RBP13.29□□□□□ -0.28
VPS37C-204ENST00000538036 CDCA5Q96FF9 252 aa13.29□□□□□ -0.28
VPS37C-204ENST00000538036 ANKIB1Q9P2G1 1089 aa13.29□□□□□ -0.28
VPS37C-204ENST00000538036 GGA1Q9UJY5 639 aa13.29□□□□□ -0.28
VPS37C-204ENST00000538036 LAS1LQ9Y4W2 734 aaKnown RBP13.29□□□□□ -0.28
VPS37C-204ENST00000538036 UFL1O94874 794 aa13.28□□□□□ -0.28
VPS37C-204ENST00000538036 SCARF1Q14162 830 aa13.28□□□□□ -0.28
VPS37C-204ENST00000538036 NEUROD2Q15784 382 aa13.28□□□□□ -0.28
VPS37C-204ENST00000538036 RSBN1LQ6PCB5 846 aaPredicted RBP13.28□□□□□ -0.28
VPS37C-204ENST00000538036 PITPNM2Q9BZ72 1349 aa13.28□□□□□ -0.28
VPS37C-204ENST00000538036 USP17L8P0C7I0 530 aa13.27□□□□□ -0.29
VPS37C-204ENST00000538036 GOLGA2Q08379 1002 aa13.27□□□□□ -0.29
VPS37C-204ENST00000538036 CCDC152Q4G0S7 254 aa13.27□□□□□ -0.29
VPS37C-204ENST00000538036 RTL5Q5HYW3 569 aaPredicted RBP13.27□□□□□ -0.29
VPS37C-204ENST00000538036 ANGEL2Q5VTE6 544 aaKnown RBP13.27□□□□□ -0.29
VPS37C-204ENST00000538036 RIC3Q7Z5B4 369 aa13.27□□□□□ -0.29
VPS37C-204ENST00000538036 PODNQ7Z5L7 613 aa13.27□□□□□ -0.29
VPS37C-204ENST00000538036 ZNF428Q96B54 188 aa13.27□□□□□ -0.29
VPS37C-204ENST00000538036 RUNDC1Q96C34 613 aa13.27□□□□□ -0.29
VPS37C-204ENST00000538036 TRIM35Q9UPQ4 493 aa13.27□□□□□ -0.29
VPS37C-204ENST00000538036 MMP14P50281 582 aa13.26□□□□□ -0.29
VPS37C-204ENST00000538036 DUSP27Q5VZP5 1158 aa13.26□□□□□ -0.29
VPS37C-204ENST00000538036 RASAL3Q86YV0 1011 aa13.26□□□□□ -0.29
VPS37C-204ENST00000538036 CCDC191Q8NCU4 936 aa13.26□□□□□ -0.29
VPS37C-204ENST00000538036 GMLQ99445 158 aa13.26□□□□□ -0.29
VPS37C-204ENST00000538036 CHMP4AQ9BY43 222 aa13.26□□□□□ -0.29
VPS37C-204ENST00000538036 SEC31BQ9NQW1 1179 aa13.26□□□□□ -0.29
VPS37C-204ENST00000538036 TAF1P21675 1872 aa13.25□□□□□ -0.29
VPS37C-204ENST00000538036 DDX60Q8IY21 1712 aaKnown RBP13.25□□□□□ -0.29
VPS37C-204ENST00000538036 TNRC18O15417 2968 aaPredicted RBP13.25□□□□□ -0.29
VPS37C-204ENST00000538036 ASTN2O75129 1339 aaPredicted RBP13.25□□□□□ -0.29
VPS37C-204ENST00000538036 XDHP47989 1333 aa13.25□□□□□ -0.29
VPS37C-204ENST00000538036 USP17L3A6NCW0 530 aa13.25□□□□□ -0.29
VPS37C-204ENST00000538036 USP17L4A6NCW7 530 aa13.25□□□□□ -0.29
VPS37C-204ENST00000538036 PDE8AO60658 829 aa13.25□□□□□ -0.29
VPS37C-204ENST00000538036 PCCAP05165 728 aaPredicted RBP13.25□□□□□ -0.29
VPS37C-204ENST00000538036 ATP2B4P23634 1241 aa13.25□□□□□ -0.29
VPS37C-204ENST00000538036 SOX10P56693 466 aa13.25□□□□□ -0.29
VPS37C-204ENST00000538036 NOM1Q5C9Z4 860 aaKnown RBP13.25□□□□□ -0.29
VPS37C-204ENST00000538036 USP17L1Q7RTZ2 530 aa13.25□□□□□ -0.29
VPS37C-204ENST00000538036 MYOZ2Q9NPC6 264 aa13.25□□□□□ -0.29
VPS37C-204ENST00000538036 POLR2AP24928 1970 aaKnown RBP13.24□□□□□ -0.29
VPS37C-204ENST00000538036 WDR43Q15061 677 aaKnown RBP eCLIP13.24□□□□□ -0.29
VPS37C-204ENST00000538036 PRPF38BQ5VTL8 546 aaKnown RBP13.24□□□□□ -0.29
VPS37C-204ENST00000538036 ANKRD18AQ8IVF6 992 aa13.24□□□□□ -0.29
VPS37C-204ENST00000538036 CCDC146Q8IYE0 955 aa13.24□□□□□ -0.29
VPS37C-204ENST00000538036 MYBBP1AQ9BQG0 1328 aaKnown RBP13.23□□□□□ -0.29
VPS37C-204ENST00000538036 TM4SF4P48230 202 aa13.23□□□□□ -0.29
VPS37C-204ENST00000538036 OGFOD1Q8N543 542 aa13.23□□□□□ -0.29
VPS37C-204ENST00000538036 CWC25Q9NXE8 425 aaPredicted RBP13.23□□□□□ -0.29
VPS37C-204ENST00000538036 HDAC9Q9UKV0 1011 aa13.23□□□□□ -0.29
VPS37C-204ENST00000538036 HPS5Q9UPZ3 1129 aa13.23□□□□□ -0.29
VPS37C-204ENST00000538036 MYO3BQ8WXR4 1341 aa13.22□□□□□ -0.29
VPS37C-204ENST00000538036 AKAP11Q9UKA4 1901 aa13.22□□□□□ -0.29
VPS37C-204ENST00000538036 DDX58O95786 925 aaKnown RBP13.22□□□□□ -0.29
VPS37C-204ENST00000538036 NF2P35240 595 aa13.22□□□□□ -0.29
VPS37C-204ENST00000538036 CALD1Q05682 793 aaKnown RBP13.22□□□□□ -0.29
VPS37C-204ENST00000538036 CDC5LQ99459 802 aaKnown RBP13.22□□□□□ -0.29
VPS37C-204ENST00000538036 MYD88Q99836 296 aa13.22□□□□□ -0.29
VPS37C-204ENST00000538036 MBIPQ9NS73 344 aa13.22□□□□□ -0.29
VPS37C-204ENST00000538036 UBE2Q2LH0YL09 131 aa13.21□□□□□ -0.29
VPS37C-204ENST00000538036 ZNF853P0CG23 659 aa13.21□□□□□ -0.29
VPS37C-204ENST00000538036 ZNF296Q8WUU4 475 aaPredicted RBP13.21□□□□□ -0.29
VPS37C-204ENST00000538036 METTL22Q9BUU2 404 aaPredicted RBP13.21□□□□□ -0.29
VPS37C-204ENST00000538036 PHAXQ9H814 394 aaKnown RBP13.21□□□□□ -0.29
VPS37C-204ENST00000538036 BSDC1Q9NW68 430 aaPredicted RBP13.21□□□□□ -0.29
VPS37C-204ENST00000538036 PAPPA2Q9BXP8 1791 aa13.21□□□□□ -0.29
VPS37C-204ENST00000538036 SCN9AQ15858 1988 aa13.2□□□□□ -0.3
VPS37C-204ENST00000538036 GNAI1P63096 354 aa13.2□□□□□ -0.3
VPS37C-204ENST00000538036 SREBF2Q12772 1141 aa13.2□□□□□ -0.3
VPS37C-204ENST00000538036 STRIP1Q5VSL9 837 aa13.2□□□□□ -0.3
VPS37C-204ENST00000538036 CFHR5Q9BXR6 569 aa13.2□□□□□ -0.3
VPS37C-204ENST00000538036 IFT57Q9NWB7 429 aa13.2□□□□□ -0.3
VPS37C-204ENST00000538036 ADAMTS8Q9UP79 889 aa13.2□□□□□ -0.3
VPS37C-204ENST00000538036 COL4A1P02462 1669 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms