RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 UTYO14607 1347 aa21.8■■□□□ 1.08
SFSWAP-205ENST00000537164 YDJCA8MPS7 323 aa21.8■■□□□ 1.08
SFSWAP-205ENST00000537164 ITGA6P23229 1130 aa21.8■■□□□ 1.08
SFSWAP-205ENST00000537164 CHADLQ6NUI6 762 aa21.8■■□□□ 1.08
SFSWAP-205ENST00000537164 SLC4A10Q6U841 1118 aa21.8■■□□□ 1.08
SFSWAP-205ENST00000537164 ANKIB1Q9P2G1 1089 aa21.8■■□□□ 1.08
SFSWAP-205ENST00000537164 MINPP1Q9UNW1 487 aa21.8■■□□□ 1.08
SFSWAP-205ENST00000537164 FAM161AQ3B820 660 aa21.79■■□□□ 1.08
SFSWAP-205ENST00000537164 CIAPIN1Q6FI81 312 aa21.79■■□□□ 1.08
SFSWAP-205ENST00000537164 GGA1Q9UJY5 639 aa21.79■■□□□ 1.08
SFSWAP-205ENST00000537164 PSME4Q14997 1843 aa21.78■■□□□ 1.08
SFSWAP-205ENST00000537164 TNIP1Q15025 636 aa21.78■■□□□ 1.08
SFSWAP-205ENST00000537164 C9orf78Q9NZ63 289 aaPredicted RBP21.78■■□□□ 1.08
SFSWAP-205ENST00000537164 SCN9AQ15858 1988 aa21.78■■□□□ 1.08
SFSWAP-205ENST00000537164 UFL1O94874 794 aa21.77■■□□□ 1.08
SFSWAP-205ENST00000537164 LMOD1P29536 600 aaPredicted RBP21.77■■□□□ 1.08
SFSWAP-205ENST00000537164 IGHMBP2P38935 993 aaKnown RBP21.77■■□□□ 1.08
SFSWAP-205ENST00000537164 BCL2L13Q9BXK5 485 aa21.77■■□□□ 1.08
SFSWAP-205ENST00000537164 ZC3H12CQ9C0D7 883 aaKnown RBP21.77■■□□□ 1.08
SFSWAP-205ENST00000537164 SMC4Q9NTJ3 1288 aa21.77■■□□□ 1.08
SFSWAP-205ENST00000537164 GPRC5DQ9NZD1 345 aa21.77■■□□□ 1.08
SFSWAP-205ENST00000537164 RIMBP2O15034 1052 aa21.76■■□□□ 1.07
SFSWAP-205ENST00000537164 ATP2B4P23634 1241 aa21.76■■□□□ 1.07
SFSWAP-205ENST00000537164 EPS15P42566 896 aa21.76■■□□□ 1.07
SFSWAP-205ENST00000537164 EPHA10Q5JZY3 1008 aa21.76■■□□□ 1.07
SFSWAP-205ENST00000537164 DBNDD1Q9H9R9 158 aa21.76■■□□□ 1.07
SFSWAP-205ENST00000537164 A0A1B0GUL6 1792 aa21.76■■□□□ 1.07
SFSWAP-205ENST00000537164 ANKRD18BA2A2Z9 1011 aa21.75■■□□□ 1.07
SFSWAP-205ENST00000537164 RAD17O75943 681 aa21.75■■□□□ 1.07
SFSWAP-205ENST00000537164 DNAJC5GQ8N7S2 189 aa21.75■■□□□ 1.07
SFSWAP-205ENST00000537164 GPR101Q96P66 508 aaPredicted RBP21.75■■□□□ 1.07
SFSWAP-205ENST00000537164 ECE2O60344 883 aa21.74■■□□□ 1.07
SFSWAP-205ENST00000537164 NBPF7P0C2Y1 421 aaPredicted RBP21.74■■□□□ 1.07
SFSWAP-205ENST00000537164 LMBR1LQ6UX01 489 aa21.74■■□□□ 1.07
SFSWAP-205ENST00000537164 USP50Q70EL3 339 aaPredicted RBP21.74■■□□□ 1.07
SFSWAP-205ENST00000537164 KAZALD1Q96I82 304 aa21.74■■□□□ 1.07
SFSWAP-205ENST00000537164 MED23Q9ULK4 1368 aa21.74■■□□□ 1.07
SFSWAP-205ENST00000537164 ZNF609O15014 1411 aa21.73■■□□□ 1.07
SFSWAP-205ENST00000537164 GMPSP49915 693 aaPredicted RBP21.73■■□□□ 1.07
SFSWAP-205ENST00000537164 CCT4P50991 539 aaKnown RBP21.73■■□□□ 1.07
SFSWAP-205ENST00000537164 RARSP54136 660 aaKnown RBP21.73■■□□□ 1.07
SFSWAP-205ENST00000537164 IFIT5Q13325 482 aaKnown RBP21.73■■□□□ 1.07
SFSWAP-205ENST00000537164 EAPPQ56P03 285 aaPredicted RBP21.73■■□□□ 1.07
SFSWAP-205ENST00000537164 DPF2Q92785 391 aa21.73■■□□□ 1.07
SFSWAP-205ENST00000537164 MPHOSPH8Q99549 860 aa21.73■■□□□ 1.07
SFSWAP-205ENST00000537164 ANKRD2Q9GZV1 360 aa21.73■■□□□ 1.07
SFSWAP-205ENST00000537164 ADARB2Q9NS39 739 aaKnown RBP21.73■■□□□ 1.07
SFSWAP-205ENST00000537164 LEMD3Q9Y2U8 911 aa21.73■■□□□ 1.07
SFSWAP-205ENST00000537164 PASKQ96RG2 1323 aa21.73■■□□□ 1.07
SFSWAP-205ENST00000537164 PCNTO95613 3336 aa21.72■■□□□ 1.07
SFSWAP-205ENST00000537164 PSMD14O00487 310 aa21.72■■□□□ 1.07
SFSWAP-205ENST00000537164 ITGBL1O95965 494 aaPredicted RBP21.72■■□□□ 1.07
SFSWAP-205ENST00000537164 DOK7Q18PE1 504 aa21.72■■□□□ 1.07
SFSWAP-205ENST00000537164 SUCLG2Q96I99 432 aa21.72■■□□□ 1.07
SFSWAP-205ENST00000537164 WTIPA6NIX2 430 aaPredicted RBP21.71■■□□□ 1.07
SFSWAP-205ENST00000537164 HNRNPUQ00839 825 aaKnown RBP eCLIP21.71■■□□□ 1.07
SFSWAP-205ENST00000537164 RABL6Q3YEC7 729 aaPredicted RBP21.71■■□□□ 1.07
SFSWAP-205ENST00000537164 USP44Q9H0E7 712 aa21.71■■□□□ 1.07
SFSWAP-205ENST00000537164 KCNQ5Q9NR82 932 aa21.71■■□□□ 1.07
SFSWAP-205ENST00000537164 ZNF646O15015 1829 aaPredicted RBP21.71■■□□□ 1.07
SFSWAP-205ENST00000537164 VIL1P09327 827 aaKnown RBP21.7■■□□□ 1.06
SFSWAP-205ENST00000537164 RPS12P25398 132 aaKnown RBP21.7■■□□□ 1.06
SFSWAP-205ENST00000537164 CCDC57Q2TAC2 916 aa21.7■■□□□ 1.06
SFSWAP-205ENST00000537164 PODNQ7Z5L7 613 aa21.7■■□□□ 1.06
SFSWAP-205ENST00000537164 NOB1Q9ULX3 412 aaKnown RBP21.7■■□□□ 1.06
SFSWAP-205ENST00000537164 CHRNDQ07001 517 aa21.69■■□□□ 1.06
SFSWAP-205ENST00000537164 ARHGAP45Q92619 1136 aa21.69■■□□□ 1.06
SFSWAP-205ENST00000537164 PGAP2Q9UHJ9 254 aa21.69■■□□□ 1.06
SFSWAP-205ENST00000537164 CLEC11AQ9Y240 323 aa21.69■■□□□ 1.06
SFSWAP-205ENST00000537164 HTRA3P83110 453 aa21.68■■□□□ 1.06
SFSWAP-205ENST00000537164 CNTROBQ8N137 903 aa21.68■■□□□ 1.06
SFSWAP-205ENST00000537164 API5Q9BZZ5 524 aaKnown RBP21.68■■□□□ 1.06
SFSWAP-205ENST00000537164 CNOT7Q9UIV1 285 aaKnown RBP21.68■■□□□ 1.06
SFSWAP-205ENST00000537164 CHMP3Q9Y3E7 222 aa21.68■■□□□ 1.06
SFSWAP-205ENST00000537164 ZNF804BA4D1E1 1349 aa21.68■■□□□ 1.06
SFSWAP-205ENST00000537164 KIF16BQ96L93 1317 aa21.68■■□□□ 1.06
SFSWAP-205ENST00000537164 G3V3G9 751 aa21.67■■□□□ 1.06
SFSWAP-205ENST00000537164 DCAF8Q5TAQ9 597 aa21.67■■□□□ 1.06
SFSWAP-205ENST00000537164 BICC1Q9H694 974 aaKnown RBP21.67■■□□□ 1.06
SFSWAP-205ENST00000537164 ZBTB12Q9Y330 459 aaPredicted RBP21.67■■□□□ 1.06
SFSWAP-205ENST00000537164 ZBED9Q6R2W3 1325 aa21.66■■□□□ 1.06
SFSWAP-205ENST00000537164 IRS2Q9Y4H2 1338 aa21.66■■□□□ 1.06
SFSWAP-205ENST00000537164 MAP1SQ66K74 1059 aaPredicted RBP21.66■■□□□ 1.06
SFSWAP-205ENST00000537164 LDHAL6AQ6ZMR3 332 aa21.66■■□□□ 1.06
SFSWAP-205ENST00000537164 C15orf52Q6ZUT6 534 aaKnown RBP21.66■■□□□ 1.06
SFSWAP-205ENST00000537164 ANKRD44Q8N8A2 993 aa21.66■■□□□ 1.06
SFSWAP-205ENST00000537164 ZC3H15Q8WU90 426 aaKnown RBP21.66■■□□□ 1.06
SFSWAP-205ENST00000537164 CREBZFQ9NS37 354 aa21.66■■□□□ 1.06
SFSWAP-205ENST00000537164 H7C1D1 291 aa21.65■■□□□ 1.06
SFSWAP-205ENST00000537164 TXNRD3Q86VQ6 643 aa21.65■■□□□ 1.06
SFSWAP-205ENST00000537164 MICALL2Q8IY33 904 aa21.65■■□□□ 1.06
SFSWAP-205ENST00000537164 KLRG1Q96E93 195 aa21.65■■□□□ 1.06
SFSWAP-205ENST00000537164 ZNF594Q96JF6 807 aaPredicted RBP21.65■■□□□ 1.06
SFSWAP-205ENST00000537164 COA1Q9GZY4 146 aa21.65■■□□□ 1.06
SFSWAP-205ENST00000537164 HIRAP54198 1017 aaPredicted RBP21.64■■□□□ 1.05
SFSWAP-205ENST00000537164 AGBL3Q8NEM8 1001 aa21.64■■□□□ 1.05
SFSWAP-205ENST00000537164 GMLQ99445 158 aa21.64■■□□□ 1.05
SFSWAP-205ENST00000537164 TRPM7Q96QT4 1865 aa21.64■■□□□ 1.05
SFSWAP-205ENST00000537164 SHTN1A0MZ66 631 aa21.63■■□□□ 1.05
SFSWAP-205ENST00000537164 USP17L3A6NCW0 530 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms