RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 CDC5LQ99459 802 aaKnown RBP28.83■■■□□ 2.21
PTPMT1-205ENST00000534775 ANO2Q9NQ90 1003 aa28.83■■■□□ 2.21
PTPMT1-205ENST00000534775 SPEF2Q9C093 1822 aa28.83■■■□□ 2.21
PTPMT1-205ENST00000534775 CARMIL3Q8ND23 1372 aa28.83■■■□□ 2.21
PTPMT1-205ENST00000534775 ABCC12Q96J65 1359 aa28.83■■■□□ 2.21
PTPMT1-205ENST00000534775 APBA3O96018 575 aa28.83■■■□□ 2.21
PTPMT1-205ENST00000534775 CCDC158Q5M9N0 1113 aa28.83■■■□□ 2.21
PTPMT1-205ENST00000534775 GORABQ5T7V8 394 aa28.83■■■□□ 2.21
PTPMT1-205ENST00000534775 PDE8BO95263 885 aa28.82■■■□□ 2.2
PTPMT1-205ENST00000534775 VGLL2Q8N8G2 317 aa28.82■■■□□ 2.2
PTPMT1-205ENST00000534775 XAGE2Q96GT9 111 aa28.82■■■□□ 2.2
PTPMT1-205ENST00000534775 KIF2CQ99661 725 aa28.82■■■□□ 2.2
PTPMT1-205ENST00000534775 RGPD3A6NKT7 1758 aaPredicted RBP28.82■■■□□ 2.2
PTPMT1-205ENST00000534775 RGPD4Q7Z3J3 1758 aa28.82■■■□□ 2.2
PTPMT1-205ENST00000534775 CWC27Q6UX04 472 aaKnown RBP28.81■■■□□ 2.2
PTPMT1-205ENST00000534775 TICAM2Q86XR7 235 aa28.81■■■□□ 2.2
PTPMT1-205ENST00000534775 PROM2Q8N271 834 aa28.81■■■□□ 2.2
PTPMT1-205ENST00000534775 SEC31BQ9NQW1 1179 aa28.81■■■□□ 2.2
PTPMT1-205ENST00000534775 TNS1Q9HBL0 1735 aaKnown RBP28.81■■■□□ 2.2
PTPMT1-205ENST00000534775 DNAJC2Q99543 621 aaKnown RBP28.8■■■□□ 2.2
PTPMT1-205ENST00000534775 RAD50Q92878 1312 aa28.8■■■□□ 2.2
PTPMT1-205ENST00000534775 KIAA1211Q6ZU35 1233 aa28.8■■■□□ 2.2
PTPMT1-205ENST00000534775 NLRP3Q96P20 1036 aa28.8■■■□□ 2.2
PTPMT1-205ENST00000534775 ARAP2Q8WZ64 1704 aa28.79■■■□□ 2.2
PTPMT1-205ENST00000534775 IFIT1P09914 478 aaKnown RBP28.79■■■□□ 2.2
PTPMT1-205ENST00000534775 TTC39AQ5SRH9 613 aa28.79■■■□□ 2.2
PTPMT1-205ENST00000534775 SLC4A3P48751 1232 aa28.78■■■□□ 2.2
PTPMT1-205ENST00000534775 RABEP1Q15276 862 aa28.78■■■□□ 2.2
PTPMT1-205ENST00000534775 PUM3Q15397 648 aaKnown RBP28.78■■■□□ 2.2
PTPMT1-205ENST00000534775 SNX21Q969T3 373 aa28.78■■■□□ 2.2
PTPMT1-205ENST00000534775 TBC1D2Q9BYX2 928 aa28.78■■■□□ 2.2
PTPMT1-205ENST00000534775 HSCBQ8IWL3 235 aa28.77■■■□□ 2.2
PTPMT1-205ENST00000534775 NPHP1O15259 732 aa28.76■■■□□ 2.2
PTPMT1-205ENST00000534775 ADORA1P30542 326 aa28.76■■■□□ 2.2
PTPMT1-205ENST00000534775 NFIXQ14938 502 aa28.76■■■□□ 2.2
PTPMT1-205ENST00000534775 ANKRD18AQ8IVF6 992 aa28.76■■■□□ 2.2
PTPMT1-205ENST00000534775 PAG1Q9NWQ8 432 aa28.76■■■□□ 2.2
PTPMT1-205ENST00000534775 LPIN2Q92539 896 aa28.76■■■□□ 2.19
PTPMT1-205ENST00000534775 IL25Q9H293 177 aa28.76■■■□□ 2.19
PTPMT1-205ENST00000534775 GYS1P13807 737 aa28.75■■■□□ 2.19
PTPMT1-205ENST00000534775 ANAPC15P60006 121 aa28.75■■■□□ 2.19
PTPMT1-205ENST00000534775 KBTBD3Q8NAB2 608 aa28.75■■■□□ 2.19
PTPMT1-205ENST00000534775 NMIQ13287 307 aaPredicted RBP28.74■■■□□ 2.19
PTPMT1-205ENST00000534775 C3orf67Q6ZVT6 689 aa28.74■■■□□ 2.19
PTPMT1-205ENST00000534775 EDC3Q96F86 508 aaKnown RBP28.74■■■□□ 2.19
PTPMT1-205ENST00000534775 SLC5A1P13866 664 aa28.73■■■□□ 2.19
PTPMT1-205ENST00000534775 FGFR2P21802 821 aa28.73■■■□□ 2.19
PTPMT1-205ENST00000534775 ZNF512BQ96KM6 892 aaPredicted RBP28.73■■■□□ 2.19
PTPMT1-205ENST00000534775 SNRKQ9NRH2 765 aa28.73■■■□□ 2.19
PTPMT1-205ENST00000534775 DDX46Q7L014 1031 aaKnown RBP28.72■■■□□ 2.19
PTPMT1-205ENST00000534775 CNBD1Q8NA66 436 aa28.72■■■□□ 2.19
PTPMT1-205ENST00000534775 LSG1Q9H089 658 aaKnown RBP28.72■■■□□ 2.19
PTPMT1-205ENST00000534775 GOLIM4O00461 696 aa28.72■■■□□ 2.19
PTPMT1-205ENST00000534775 TFCP2L1Q9NZI6 479 aa28.72■■■□□ 2.19
PTPMT1-205ENST00000534775 LRRFIP1Q32MZ4 808 aaKnown RBP28.71■■■□□ 2.19
PTPMT1-205ENST00000534775 AKT1S1Q96B36 256 aa28.71■■■□□ 2.19
PTPMT1-205ENST00000534775 FAM227BQ96M60 508 aa28.71■■■□□ 2.19
PTPMT1-205ENST00000534775 BSDC1Q9NW68 430 aaPredicted RBP28.71■■■□□ 2.19
PTPMT1-205ENST00000534775 NDUFB9Q9Y6M9 179 aa28.71■■■□□ 2.19
PTPMT1-205ENST00000534775 FLAD1Q8NFF5 587 aa28.7■■■□□ 2.19
PTPMT1-205ENST00000534775 HELBQ8NG08 1087 aaPredicted RBP28.7■■■□□ 2.19
PTPMT1-205ENST00000534775 A0A1B0GUL6 1792 aa28.7■■■□□ 2.18
PTPMT1-205ENST00000534775 UQCRFS1P1P0C7P4 283 aa28.69■■■□□ 2.18
PTPMT1-205ENST00000534775 HSPA4P34932 840 aa28.69■■■□□ 2.18
PTPMT1-205ENST00000534775 IL17RAQ96F46 866 aa28.69■■■□□ 2.18
PTPMT1-205ENST00000534775 TNRC6CQ9HCJ0 1690 aaKnown RBP28.69■■■□□ 2.18
PTPMT1-205ENST00000534775 CHRNDQ07001 517 aa28.69■■■□□ 2.18
PTPMT1-205ENST00000534775 MED23Q9ULK4 1368 aa28.68■■■□□ 2.18
PTPMT1-205ENST00000534775 A0A0D9SFI3 127 aa28.68■■■□□ 2.18
PTPMT1-205ENST00000534775 TM4SF1P30408 202 aa28.68■■■□□ 2.18
PTPMT1-205ENST00000534775 IL27Q8NEV9 243 aa28.68■■■□□ 2.18
PTPMT1-205ENST00000534775 ST5P78524 1137 aa28.67■■■□□ 2.18
PTPMT1-205ENST00000534775 FKBP4Q02790 459 aaKnown RBP eCLIP28.67■■■□□ 2.18
PTPMT1-205ENST00000534775 ZNF827Q17R98 1081 aa28.67■■■□□ 2.18
PTPMT1-205ENST00000534775 COL4A1P02462 1669 aa28.67■■■□□ 2.18
PTPMT1-205ENST00000534775 CCDC171Q6TFL3 1326 aa28.67■■■□□ 2.18
PTPMT1-205ENST00000534775 TAF5LO75529 589 aa28.66■■■□□ 2.18
PTPMT1-205ENST00000534775 TAF1P21675 1872 aa28.66■■■□□ 2.18
PTPMT1-205ENST00000534775 ST18O60284 1047 aa28.65■■■□□ 2.18
PTPMT1-205ENST00000534775 ARID4AP29374 1257 aaPredicted RBP28.65■■■□□ 2.18
PTPMT1-205ENST00000534775 RPS8P62241 208 aaKnown RBP28.65■■■□□ 2.18
PTPMT1-205ENST00000534775 CCDC102BQ68D86 513 aa28.65■■■□□ 2.18
PTPMT1-205ENST00000534775 PRR5LQ6MZQ0 368 aa28.65■■■□□ 2.18
PTPMT1-205ENST00000534775 AKAP11Q9UKA4 1901 aa28.65■■■□□ 2.18
PTPMT1-205ENST00000534775 SERPINB2P05120 415 aa28.65■■■□□ 2.18
PTPMT1-205ENST00000534775 CELF1Q92879 486 aaKnown RBP28.65■■■□□ 2.18
PTPMT1-205ENST00000534775 MCMDC2Q4G0Z9 681 aa28.64■■■□□ 2.18
PTPMT1-205ENST00000534775 CCDC24Q8N4L8 307 aa28.64■■■□□ 2.18
PTPMT1-205ENST00000534775 HELLSQ9NRZ9 838 aa28.64■■■□□ 2.18
PTPMT1-205ENST00000534775 TTF1Q15361 905 aaPredicted RBP28.63■■■□□ 2.17
PTPMT1-205ENST00000534775 ZFYP08048 801 aaPredicted RBP28.62■■■□□ 2.17
PTPMT1-205ENST00000534775 MCAMP43121 646 aa28.62■■■□□ 2.17
PTPMT1-205ENST00000534775 ZAP70P43403 619 aa28.62■■■□□ 2.17
PTPMT1-205ENST00000534775 UBE4AQ14139 1066 aa28.62■■■□□ 2.17
PTPMT1-205ENST00000534775 SCARF1Q14162 830 aa28.62■■■□□ 2.17
PTPMT1-205ENST00000534775 NLGN1Q8N2Q7 840 aa28.62■■■□□ 2.17
PTPMT1-205ENST00000534775 PALD1Q9ULE6 856 aa28.62■■■□□ 2.17
PTPMT1-205ENST00000534775 MINPP1Q9UNW1 487 aa28.62■■■□□ 2.17
PTPMT1-205ENST00000534775 K7ELQ4 463 aaPredicted RBP28.61■■■□□ 2.17
PTPMT1-205ENST00000534775 RNF113AO15541 343 aaKnown RBP28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms