RNA–Protein interactions for RNA: ENST00000534348.5

NEDD8-MDP1-202, Transcript of NEDD8-MDP1 readthrough, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NEDD8-MDP1, Length 595 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-202ENST00000534348 AMER1Q5JTC6 1135 aaPredicted RBP13.62□□□□□ -0.23
NEDD8-MDP1-202ENST00000534348 CC2D1BQ5T0F9 858 aaKnown RBP13.62□□□□□ -0.23
NEDD8-MDP1-202ENST00000534348 GIGYF2Q6Y7W6 1299 aaKnown RBP13.62□□□□□ -0.23
NEDD8-MDP1-202ENST00000534348 POLLQ9UGP5 575 aa13.62□□□□□ -0.23
NEDD8-MDP1-202ENST00000534348 G3V3G9 751 aa13.61□□□□□ -0.23
NEDD8-MDP1-202ENST00000534348 PTPN12Q05209 780 aaKnown RBP13.61□□□□□ -0.23
NEDD8-MDP1-202ENST00000534348 PARP10Q53GL7 1025 aa13.61□□□□□ -0.23
NEDD8-MDP1-202ENST00000534348 DCAF8Q5TAQ9 597 aa13.61□□□□□ -0.23
NEDD8-MDP1-202ENST00000534348 ARMC5Q96C12 935 aa13.61□□□□□ -0.23
NEDD8-MDP1-202ENST00000534348 CFHR5Q9BXR6 569 aa13.61□□□□□ -0.23
NEDD8-MDP1-202ENST00000534348 DUOX1Q9NRD9 1551 aa13.61□□□□□ -0.23
NEDD8-MDP1-202ENST00000534348 VIL1P09327 827 aaKnown RBP13.6□□□□□ -0.23
NEDD8-MDP1-202ENST00000534348 GPSM2P81274 684 aa13.6□□□□□ -0.23
NEDD8-MDP1-202ENST00000534348 DPF3Q92784 378 aa13.6□□□□□ -0.23
NEDD8-MDP1-202ENST00000534348 THUMPD2Q9BTF0 503 aaKnown RBP13.6□□□□□ -0.23
NEDD8-MDP1-202ENST00000534348 EFCC1Q9HA90 598 aa13.6□□□□□ -0.23
NEDD8-MDP1-202ENST00000534348 ALDH1A1P00352 501 aa13.59□□□□□ -0.23
NEDD8-MDP1-202ENST00000534348 ERO1AQ96HE7 468 aa13.59□□□□□ -0.23
NEDD8-MDP1-202ENST00000534348 MYOZ2Q9NPC6 264 aa13.59□□□□□ -0.23
NEDD8-MDP1-202ENST00000534348 FZD1Q9UP38 647 aa13.59□□□□□ -0.23
NEDD8-MDP1-202ENST00000534348 UNC80Q8N2C7 3258 aa13.59□□□□□ -0.23
NEDD8-MDP1-202ENST00000534348 TAF1P21675 1872 aa13.59□□□□□ -0.23
NEDD8-MDP1-202ENST00000534348 NF2P35240 595 aa13.58□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 ZNF280AP59817 542 aaPredicted RBP13.58□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 TAF7Q15545 349 aaPredicted RBP13.58□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 SPRYD7Q5W111 196 aa13.58□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 IFNL1Q8IU54 200 aa13.58□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 CELF1Q92879 486 aaKnown RBP13.58□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 EYA3Q99504 573 aa13.58□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 ZC3H12CQ9C0D7 883 aaKnown RBP13.58□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 TRMT112Q9UI30 125 aaKnown RBP13.58□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 WTIPA6NIX2 430 aaPredicted RBP13.57□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 USP17L8P0C7I0 530 aa13.57□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 HSPA5P11021 654 aaKnown RBP13.57□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 MNX1P50219 401 aaPredicted RBP13.57□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 CAP1Q01518 475 aa13.57□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 NBPF9Q3BBW0 867 aa13.57□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 RSBN1LQ6PCB5 846 aaPredicted RBP13.57□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 TBC1D16Q8TBP0 767 aa13.57□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 ZNF333Q96JL9 665 aa13.57□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 LAMA3Q16787 3333 aa13.57□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 RBBP6Q7Z6E9 1792 aaKnown RBP13.56□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 IGF2BP3O00425 579 aaKnown RBP eCLIP13.56□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 SLC9C1Q4G0N8 1177 aa13.56□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 TMC4Q7Z404 712 aa13.56□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 RSPH6AQ9H0K4 717 aa13.56□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 ANGEL1Q9UNK9 670 aaKnown RBP13.56□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 PITPNM2Q9BZ72 1349 aa13.56□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 ANXA1P04083 346 aa13.55□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 ARMC9Q7Z3E5 817 aa13.55□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 NBPF11Q86T75 865 aa13.55□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 MANSC4A6NHS7 340 aaPredicted RBP13.54□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 SP3Q02447 781 aa13.54□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 CRHR2Q13324 411 aa13.54□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 NLRP10Q86W26 655 aa13.54□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 AGBL3Q8NEM8 1001 aa13.54□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 SLC10A4Q96EP9 437 aa13.54□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 LRCH3Q96II8 777 aa13.54□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 PTCH2Q9Y6C5 1203 aa13.54□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 SH3TC1Q8TE82 1336 aa13.54□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 COL3A1P02461 1466 aaPredicted RBP13.54□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 LAMB2P55268 1798 aa13.53□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 SCN9AQ15858 1988 aa13.53□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 SOX1O00570 391 aaPredicted RBP13.53□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 UFL1O94874 794 aa13.53□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 EIF2S2P20042 333 aaKnown RBP13.53□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 EIF4G2P78344 907 aaKnown RBP eCLIP13.53□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 AIMP1Q12904 312 aaKnown RBP13.53□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 SH3TC2Q8TF17 1288 aa13.53□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 ZNF609O15014 1411 aa13.53□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 LAMB4A4D0S4 1761 aa13.53□□□□□ -0.24
NEDD8-MDP1-202ENST00000534348 INHBEP58166 350 aa13.52□□□□□ -0.25
NEDD8-MDP1-202ENST00000534348 EIF4A1P60842 406 aaKnown RBP13.52□□□□□ -0.25
NEDD8-MDP1-202ENST00000534348 RTL5Q5HYW3 569 aaPredicted RBP13.52□□□□□ -0.25
NEDD8-MDP1-202ENST00000534348 MXD3Q9BW11 206 aa13.52□□□□□ -0.25
NEDD8-MDP1-202ENST00000534348 ANKIB1Q9P2G1 1089 aa13.52□□□□□ -0.25
NEDD8-MDP1-202ENST00000534348 SASH1O94885 1247 aa13.51□□□□□ -0.25
NEDD8-MDP1-202ENST00000534348 U2AF1L5P0DN76 240 aaPredicted RBP13.51□□□□□ -0.25
NEDD8-MDP1-202ENST00000534348 U2AF1Q01081 240 aaKnown RBP eCLIP13.51□□□□□ -0.25
NEDD8-MDP1-202ENST00000534348 PROSER3Q2NL68 480 aa13.51□□□□□ -0.25
NEDD8-MDP1-202ENST00000534348 LDLRAD1Q5T700 205 aa13.51□□□□□ -0.25
NEDD8-MDP1-202ENST00000534348 FBXW7Q969H0 707 aa13.51□□□□□ -0.25
NEDD8-MDP1-202ENST00000534348 CLMNQ96JQ2 1002 aa13.51□□□□□ -0.25
NEDD8-MDP1-202ENST00000534348 GMLQ99445 158 aa13.51□□□□□ -0.25
NEDD8-MDP1-202ENST00000534348 COL25A1Q9BXS0 654 aaPredicted RBP13.51□□□□□ -0.25
NEDD8-MDP1-202ENST00000534348 ANKRD36CQ5JPF3 1778 aa13.5□□□□□ -0.25
NEDD8-MDP1-202ENST00000534348 WNT10BO00744 389 aa13.5□□□□□ -0.25
NEDD8-MDP1-202ENST00000534348 ECM2O94769 699 aaPredicted RBP13.5□□□□□ -0.25
NEDD8-MDP1-202ENST00000534348 NECTIN2Q92692 538 aa13.5□□□□□ -0.25
NEDD8-MDP1-202ENST00000534348 WNK4Q96J92 1243 aa13.5□□□□□ -0.25
NEDD8-MDP1-202ENST00000534348 LRRC37AA6NMS7 1700 aa13.5□□□□□ -0.25
NEDD8-MDP1-202ENST00000534348 USP17L3A6NCW0 530 aa13.49□□□□□ -0.25
NEDD8-MDP1-202ENST00000534348 USP17L4A6NCW7 530 aa13.49□□□□□ -0.25
NEDD8-MDP1-202ENST00000534348 HSP90AB3PQ58FF7 597 aa13.49□□□□□ -0.25
NEDD8-MDP1-202ENST00000534348 OTUD7BQ6GQQ9 843 aa13.49□□□□□ -0.25
NEDD8-MDP1-202ENST00000534348 COPS6Q7L5N1 327 aa13.49□□□□□ -0.25
NEDD8-MDP1-202ENST00000534348 USP17L1Q7RTZ2 530 aa13.49□□□□□ -0.25
NEDD8-MDP1-202ENST00000534348 FAM89AQ96GI7 184 aa13.49□□□□□ -0.25
NEDD8-MDP1-202ENST00000534348 GGA1Q9UJY5 639 aa13.49□□□□□ -0.25
NEDD8-MDP1-202ENST00000534348 COL4A1P02462 1669 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms