RNA–Protein interactions for RNA: ENST00000534086.1

AP003555.3-201, humanhuman

TSL 4 BASIC

Gene AP003555.3, Length 432 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.3-201ENST00000534086 LINS1Q8NG48 757 aa22.66■■□□□ 1.22
AP003555.3-201ENST00000534086 GPR101Q96P66 508 aaPredicted RBP22.66■■□□□ 1.22
AP003555.3-201ENST00000534086 MKRN1Q9UHC7 482 aaKnown RBP22.66■■□□□ 1.22
AP003555.3-201ENST00000534086 GGA1Q9UJY5 639 aa22.66■■□□□ 1.22
AP003555.3-201ENST00000534086 ECE2O60344 883 aa22.65■■□□□ 1.22
AP003555.3-201ENST00000534086 DOK7Q18PE1 504 aa22.65■■□□□ 1.22
AP003555.3-201ENST00000534086 GREM2Q9H772 168 aa22.65■■□□□ 1.22
AP003555.3-201ENST00000534086 G3V3G9 751 aa22.64■■□□□ 1.21
AP003555.3-201ENST00000534086 PSMD14O00487 310 aa22.64■■□□□ 1.21
AP003555.3-201ENST00000534086 DCAF8Q5TAQ9 597 aa22.64■■□□□ 1.21
AP003555.3-201ENST00000534086 CNOT7Q9UIV1 285 aaKnown RBP22.64■■□□□ 1.21
AP003555.3-201ENST00000534086 MYH3P11055 1940 aa22.63■■□□□ 1.21
AP003555.3-201ENST00000534086 ZBTB12Q9Y330 459 aaPredicted RBP22.63■■□□□ 1.21
AP003555.3-201ENST00000534086 XDHP47989 1333 aa22.62■■□□□ 1.21
AP003555.3-201ENST00000534086 ZNF521Q96K83 1311 aa22.62■■□□□ 1.21
AP003555.3-201ENST00000534086 F6X3S4 739 aa22.62■■□□□ 1.21
AP003555.3-201ENST00000534086 H7C1D1 291 aa22.62■■□□□ 1.21
AP003555.3-201ENST00000534086 PLA2G12BQ9BX93 195 aa22.62■■□□□ 1.21
AP003555.3-201ENST00000534086 KCNQ5Q9NR82 932 aa22.62■■□□□ 1.21
AP003555.3-201ENST00000534086 BSDC1Q9NW68 430 aaPredicted RBP22.62■■□□□ 1.21
AP003555.3-201ENST00000534086 RTL9Q8NET4 1388 aa22.62■■□□□ 1.21
AP003555.3-201ENST00000534086 ATP2B4P23634 1241 aa22.61■■□□□ 1.21
AP003555.3-201ENST00000534086 CASP7P55210 303 aa22.61■■□□□ 1.21
AP003555.3-201ENST00000534086 DPF2Q92785 391 aa22.61■■□□□ 1.21
AP003555.3-201ENST00000534086 CNTNAP1P78357 1384 aa22.61■■□□□ 1.21
AP003555.3-201ENST00000534086 MICALL2Q8IY33 904 aa22.6■■□□□ 1.21
AP003555.3-201ENST00000534086 MINPP1Q9UNW1 487 aa22.6■■□□□ 1.21
AP003555.3-201ENST00000534086 SHTN1A0MZ66 631 aa22.59■■□□□ 1.21
AP003555.3-201ENST00000534086 IGHMBP2P38935 993 aaKnown RBP22.59■■□□□ 1.21
AP003555.3-201ENST00000534086 HIRAP54198 1017 aaPredicted RBP22.59■■□□□ 1.21
AP003555.3-201ENST00000534086 BEND3Q5T5X7 828 aa22.59■■□□□ 1.21
AP003555.3-201ENST00000534086 CSF1RP07333 972 aa22.58■■□□□ 1.21
AP003555.3-201ENST00000534086 ITGA6P23229 1130 aa22.58■■□□□ 1.21
AP003555.3-201ENST00000534086 RPS12P25398 132 aaKnown RBP22.58■■□□□ 1.21
AP003555.3-201ENST00000534086 FMR1Q06787 632 aaKnown RBP eCLIP22.58■■□□□ 1.21
AP003555.3-201ENST00000534086 TRPM4Q8TD43 1214 aa22.58■■□□□ 1.21
AP003555.3-201ENST00000534086 ZC3H15Q8WU90 426 aaKnown RBP22.58■■□□□ 1.21
AP003555.3-201ENST00000534086 PGAP2Q9UHJ9 254 aa22.58■■□□□ 1.21
AP003555.3-201ENST00000534086 TRAF5O00463 557 aa22.57■■□□□ 1.2
AP003555.3-201ENST00000534086 VIL1P09327 827 aaKnown RBP22.57■■□□□ 1.2
AP003555.3-201ENST00000534086 HSPA1AP0DMV8 641 aaKnown RBP22.57■■□□□ 1.2
AP003555.3-201ENST00000534086 HSPA1BP0DMV9 641 aaKnown RBP22.57■■□□□ 1.2
AP003555.3-201ENST00000534086 DEFB115Q30KQ5 88 aa22.57■■□□□ 1.2
AP003555.3-201ENST00000534086 ABT1Q9ULW3 272 aaKnown RBP22.57■■□□□ 1.2
AP003555.3-201ENST00000534086 VEGFBP49765 207 aa22.56■■□□□ 1.2
AP003555.3-201ENST00000534086 FAM161AQ3B820 660 aa22.56■■□□□ 1.2
AP003555.3-201ENST00000534086 SPEF2Q9C093 1822 aa22.55■■□□□ 1.2
AP003555.3-201ENST00000534086 RASSF10A6NK89 507 aa22.55■■□□□ 1.2
AP003555.3-201ENST00000534086 E9PSI1 815 aa22.55■■□□□ 1.2
AP003555.3-201ENST00000534086 CCT4P50991 539 aaKnown RBP22.55■■□□□ 1.2
AP003555.3-201ENST00000534086 IFFO2Q5TF58 517 aa22.55■■□□□ 1.2
AP003555.3-201ENST00000534086 SAMD7Q7Z3H4 446 aa22.55■■□□□ 1.2
AP003555.3-201ENST00000534086 MPHOSPH8Q99549 860 aa22.55■■□□□ 1.2
AP003555.3-201ENST00000534086 WTIPA6NIX2 430 aaPredicted RBP22.54■■□□□ 1.2
AP003555.3-201ENST00000534086 TBC1D10BQ4KMP7 808 aaPredicted RBP22.54■■□□□ 1.2
AP003555.3-201ENST00000534086 CST9Q5W186 159 aa22.54■■□□□ 1.2
AP003555.3-201ENST00000534086 SLC4A10Q6U841 1118 aa22.54■■□□□ 1.2
AP003555.3-201ENST00000534086 GLIS2Q9BZE0 524 aaPredicted RBP22.54■■□□□ 1.2
AP003555.3-201ENST00000534086 SCN9AQ15858 1988 aa22.54■■□□□ 1.2
AP003555.3-201ENST00000534086 ANKRD18BA2A2Z9 1011 aa22.53■■□□□ 1.2
AP003555.3-201ENST00000534086 FOXO4P98177 505 aa22.53■■□□□ 1.2
AP003555.3-201ENST00000534086 RBM26Q5T8P6 1007 aaKnown RBP22.53■■□□□ 1.2
AP003555.3-201ENST00000534086 CDC37L1Q7L3B6 337 aa22.53■■□□□ 1.2
AP003555.3-201ENST00000534086 PODNQ7Z5L7 613 aa22.53■■□□□ 1.2
AP003555.3-201ENST00000534086 ANKRD2Q9GZV1 360 aa22.53■■□□□ 1.2
AP003555.3-201ENST00000534086 LEMD3Q9Y2U8 911 aa22.53■■□□□ 1.2
AP003555.3-201ENST00000534086 TRPM7Q96QT4 1865 aa22.53■■□□□ 1.2
AP003555.3-201ENST00000534086 GRM8O00222 908 aa22.52■■□□□ 1.2
AP003555.3-201ENST00000534086 ALDH1L1O75891 902 aa22.52■■□□□ 1.2
AP003555.3-201ENST00000534086 SRCIN1Q9C0H9 1055 aa22.52■■□□□ 1.2
AP003555.3-201ENST00000534086 C9orf78Q9NZ63 289 aaPredicted RBP22.52■■□□□ 1.2
AP003555.3-201ENST00000534086 CHMP3Q9Y3E7 222 aa22.52■■□□□ 1.2
AP003555.3-201ENST00000534086 MED23Q9ULK4 1368 aa22.51■■□□□ 1.19
AP003555.3-201ENST00000534086 SLFN5Q08AF3 891 aa22.51■■□□□ 1.19
AP003555.3-201ENST00000534086 IFIT5Q13325 482 aaKnown RBP22.51■■□□□ 1.19
AP003555.3-201ENST00000534086 RSBN1LQ6PCB5 846 aaPredicted RBP22.51■■□□□ 1.19
AP003555.3-201ENST00000534086 AGBL3Q8NEM8 1001 aa22.51■■□□□ 1.19
AP003555.3-201ENST00000534086 USP17L3A6NCW0 530 aa22.5■■□□□ 1.19
AP003555.3-201ENST00000534086 USP17L4A6NCW7 530 aa22.5■■□□□ 1.19
AP003555.3-201ENST00000534086 CCER2I3L3R5 266 aa22.5■■□□□ 1.19
AP003555.3-201ENST00000534086 CELF2O95319 508 aaKnown RBP22.5■■□□□ 1.19
AP003555.3-201ENST00000534086 EGFRP00533 1210 aa22.5■■□□□ 1.19
AP003555.3-201ENST00000534086 LMBR1LQ6UX01 489 aa22.5■■□□□ 1.19
AP003555.3-201ENST00000534086 USP17L1Q7RTZ2 530 aa22.5■■□□□ 1.19
AP003555.3-201ENST00000534086 MRPL50Q8N5N7 158 aaKnown RBP22.5■■□□□ 1.19
AP003555.3-201ENST00000534086 COL13A1Q5TAT6 717 aaPredicted RBP22.49■■□□□ 1.19
AP003555.3-201ENST00000534086 USP48Q86UV5 1035 aa22.49■■□□□ 1.19
AP003555.3-201ENST00000534086 ZNF804BA4D1E1 1349 aa22.49■■□□□ 1.19
AP003555.3-201ENST00000534086 WDR33Q9C0J8 1336 aaKnown RBP22.49■■□□□ 1.19
AP003555.3-201ENST00000534086 CHRNDQ07001 517 aa22.48■■□□□ 1.19
AP003555.3-201ENST00000534086 KIF4BQ2VIQ3 1234 aa22.48■■□□□ 1.19
AP003555.3-201ENST00000534086 EPHA10Q5JZY3 1008 aa22.48■■□□□ 1.19
AP003555.3-201ENST00000534086 PAXIP1Q6ZW49 1069 aaPredicted RBP22.48■■□□□ 1.19
AP003555.3-201ENST00000534086 DCPSQ96C86 337 aaKnown RBP22.48■■□□□ 1.19
AP003555.3-201ENST00000534086 COA1Q9GZY4 146 aa22.48■■□□□ 1.19
AP003555.3-201ENST00000534086 ZNF408Q9H9D4 720 aa22.48■■□□□ 1.19
AP003555.3-201ENST00000534086 TLL2Q9Y6L7 1015 aa22.48■■□□□ 1.19
AP003555.3-201ENST00000534086 KCNJ4P48050 445 aa22.47■■□□□ 1.19
AP003555.3-201ENST00000534086 CCDC57Q2TAC2 916 aa22.47■■□□□ 1.19
AP003555.3-201ENST00000534086 TXNRD3Q86VQ6 643 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms