RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 CICQ96RK0 1608 aaPredicted RBP34.11■■■■□ 3.05
SAMD1-202ENST00000533683 ANKRD18BA2A2Z9 1011 aa34.11■■■■□ 3.05
SAMD1-202ENST00000533683 BRD1O95696 1058 aa34.11■■■■□ 3.05
SAMD1-202ENST00000533683 LDHAL6AQ6ZMR3 332 aa34.11■■■■□ 3.05
SAMD1-202ENST00000533683 TAF6LQ9Y6J9 622 aa34.11■■■■□ 3.05
SAMD1-202ENST00000533683 SH3TC1Q8TE82 1336 aa34.11■■■■□ 3.05
SAMD1-202ENST00000533683 RIC1Q4ADV7 1423 aa34.11■■■■□ 3.05
SAMD1-202ENST00000533683 TICAM2Q86XR7 235 aa34.11■■■■□ 3.05
SAMD1-202ENST00000533683 PSMA5P28066 241 aa34.1■■■■□ 3.05
SAMD1-202ENST00000533683 VPS72Q15906 364 aa34.1■■■■□ 3.05
SAMD1-202ENST00000533683 SMARCC1Q92922 1105 aaPredicted RBP34.1■■■■□ 3.05
SAMD1-202ENST00000533683 HMG20BQ9P0W2 317 aa34.1■■■■□ 3.05
SAMD1-202ENST00000533683 TSGA10IPQ3SY00 556 aa34.09■■■■□ 3.05
SAMD1-202ENST00000533683 CCDC158Q5M9N0 1113 aa34.09■■■■□ 3.05
SAMD1-202ENST00000533683 GORABQ5T7V8 394 aa34.09■■■■□ 3.05
SAMD1-202ENST00000533683 COL9A3Q14050 684 aaPredicted RBP34.08■■■■□ 3.05
SAMD1-202ENST00000533683 SPEF2Q9C093 1822 aa34.08■■■■□ 3.05
SAMD1-202ENST00000533683 CAMTA2O94983 1202 aa34.08■■■■□ 3.05
SAMD1-202ENST00000533683 METTL24Q5JXM2 366 aa34.08■■■■□ 3.05
SAMD1-202ENST00000533683 FOXD4L5Q5VV16 416 aaPredicted RBP34.08■■■■□ 3.05
SAMD1-202ENST00000533683 SUSD4Q5VX71 490 aa34.08■■■■□ 3.05
SAMD1-202ENST00000533683 FOXD4L4Q8WXT5 416 aaPredicted RBP34.08■■■■□ 3.05
SAMD1-202ENST00000533683 LARGE1O95461 756 aa34.07■■■■□ 3.04
SAMD1-202ENST00000533683 SLFNL1Q499Z3 407 aa34.07■■■■□ 3.04
SAMD1-202ENST00000533683 TTC39AQ5SRH9 613 aa34.07■■■■□ 3.04
SAMD1-202ENST00000533683 HELLSQ9NRZ9 838 aa34.06■■■■□ 3.04
SAMD1-202ENST00000533683 CNNM1Q9NRU3 951 aa34.06■■■■□ 3.04
SAMD1-202ENST00000533683 ZMYM1Q5SVZ6 1142 aa34.05■■■■□ 3.04
SAMD1-202ENST00000533683 ATP2B3Q16720 1220 aa34.05■■■■□ 3.04
SAMD1-202ENST00000533683 U3KPZ7 1027 aaPredicted RBP34.05■■■■□ 3.04
SAMD1-202ENST00000533683 FKBP4Q02790 459 aaKnown RBP eCLIP34.04■■■■□ 3.04
SAMD1-202ENST00000533683 BLOC1S2Q6QNY1 142 aa34.04■■■■□ 3.04
SAMD1-202ENST00000533683 ZSCAN31Q96LW9 406 aaPredicted RBP34.04■■■■□ 3.04
SAMD1-202ENST00000533683 AK7Q96M32 723 aa34.04■■■■□ 3.04
SAMD1-202ENST00000533683 LMBRD1Q9NUN5 540 aa34.04■■■■□ 3.04
SAMD1-202ENST00000533683 ZSCAN21Q9Y5A6 473 aaPredicted RBP34.04■■■■□ 3.04
SAMD1-202ENST00000533683 VGLL2Q8N8G2 317 aa34.03■■■■□ 3.04
SAMD1-202ENST00000533683 SH2B1Q9NRF2 756 aaPredicted RBP34.03■■■■□ 3.04
SAMD1-202ENST00000533683 RNF113AO15541 343 aaKnown RBP34.02■■■■□ 3.04
SAMD1-202ENST00000533683 CHAMP1Q96JM3 812 aa34.02■■■■□ 3.04
SAMD1-202ENST00000533683 RPS6KB1P23443 525 aa34.02■■■■□ 3.04
SAMD1-202ENST00000533683 FNBP4Q8N3X1 1017 aaPredicted RBP34.02■■■■□ 3.04
SAMD1-202ENST00000533683 UTP14AQ9BVJ6 771 aaKnown RBP34.02■■■■□ 3.04
SAMD1-202ENST00000533683 FSD2A1L4K1 749 aa34.01■■■■□ 3.04
SAMD1-202ENST00000533683 HCLS1P14317 486 aaPredicted RBP34.01■■■■□ 3.04
SAMD1-202ENST00000533683 SCARF1Q14162 830 aa34.01■■■■□ 3.04
SAMD1-202ENST00000533683 FAM177BA6PVY3 158 aa34.01■■■■□ 3.03
SAMD1-202ENST00000533683 KLHL40Q2TBA0 621 aa34.01■■■■□ 3.03
SAMD1-202ENST00000533683 DDX49Q9Y6V7 483 aaKnown RBP34.01■■■■□ 3.03
SAMD1-202ENST00000533683 COL5A3P25940 1745 aaPredicted RBP34■■■■□ 3.03
SAMD1-202ENST00000533683 KRT32Q14532 448 aa34■■■■□ 3.03
SAMD1-202ENST00000533683 ME3Q16798 604 aa34■■■■□ 3.03
SAMD1-202ENST00000533683 PARP10Q53GL7 1025 aa34■■■■□ 3.03
SAMD1-202ENST00000533683 CCDC83Q8IWF9 413 aa33.99■■■■□ 3.03
SAMD1-202ENST00000533683 ALDH8A1Q9H2A2 487 aaPredicted RBP33.99■■■■□ 3.03
SAMD1-202ENST00000533683 TPCN1Q9ULQ1 816 aa33.99■■■■□ 3.03
SAMD1-202ENST00000533683 GOLGA6L3A6NEY3 463 aa33.98■■■■□ 3.03
SAMD1-202ENST00000533683 CYP21A2P08686 494 aa33.98■■■■□ 3.03
SAMD1-202ENST00000533683 TCEANC2Q96MN5 208 aa33.98■■■■□ 3.03
SAMD1-202ENST00000533683 PDE8BO95263 885 aa33.98■■■■□ 3.03
SAMD1-202ENST00000533683 SMC3Q9UQE7 1217 aa33.98■■■■□ 3.03
SAMD1-202ENST00000533683 MAST3O60307 1309 aa33.97■■■■□ 3.03
SAMD1-202ENST00000533683 WDR33Q9C0J8 1336 aaKnown RBP33.97■■■■□ 3.03
SAMD1-202ENST00000533683 ABCC12Q96J65 1359 aa33.97■■■■□ 3.03
SAMD1-202ENST00000533683 ST3GAL1Q11201 340 aa33.97■■■■□ 3.03
SAMD1-202ENST00000533683 L1TD1Q5T7N2 865 aaKnown RBP33.97■■■■□ 3.03
SAMD1-202ENST00000533683 DSCC1Q9BVC3 393 aa33.97■■■■□ 3.03
SAMD1-202ENST00000533683 NIP7Q9Y221 180 aaKnown RBP eCLIP33.97■■■■□ 3.03
SAMD1-202ENST00000533683 ZNF831Q5JPB2 1677 aa33.97■■■■□ 3.03
SAMD1-202ENST00000533683 PRPF40AO75400 957 aaKnown RBP33.96■■■■□ 3.03
SAMD1-202ENST00000533683 ZAP70P43403 619 aa33.96■■■■□ 3.03
SAMD1-202ENST00000533683 LINC00116Q8NCU8 138 aa33.96■■■■□ 3.03
SAMD1-202ENST00000533683 ANKRD1Q15327 319 aa33.96■■■■□ 3.03
SAMD1-202ENST00000533683 LRP5O75197 1615 aa33.96■■■■□ 3.03
SAMD1-202ENST00000533683 PI16Q6UXB8 463 aa33.95■■■■□ 3.03
SAMD1-202ENST00000533683 NTSR2O95665 410 aa33.95■■■■□ 3.02
SAMD1-202ENST00000533683 NEK1Q96PY6 1258 aa33.95■■■■□ 3.02
SAMD1-202ENST00000533683 TOB2Q14106 344 aaPredicted RBP33.94■■■■□ 3.02
SAMD1-202ENST00000533683 PTF1AQ7RTS3 328 aa33.94■■■■□ 3.02
SAMD1-202ENST00000533683 OSBP2Q969R2 916 aa33.94■■■■□ 3.02
SAMD1-202ENST00000533683 HSPD1P10809 573 aaKnown RBP33.94■■■■□ 3.02
SAMD1-202ENST00000533683 LRRFIP1Q32MZ4 808 aaKnown RBP33.94■■■■□ 3.02
SAMD1-202ENST00000533683 NECAB1Q8N987 351 aa33.94■■■■□ 3.02
SAMD1-202ENST00000533683 USP21Q9UK80 565 aa33.94■■■■□ 3.02
SAMD1-202ENST00000533683 DDX60Q8IY21 1712 aaKnown RBP33.93■■■■□ 3.02
SAMD1-202ENST00000533683 M0R2C6 588 aa33.93■■■■□ 3.02
SAMD1-202ENST00000533683 MCAMP43121 646 aa33.93■■■■□ 3.02
SAMD1-202ENST00000533683 SYT1P21579 422 aa33.92■■■■□ 3.02
SAMD1-202ENST00000533683 KCNQ4P56696 695 aa33.92■■■■□ 3.02
SAMD1-202ENST00000533683 ZNF512BQ96KM6 892 aaPredicted RBP33.92■■■■□ 3.02
SAMD1-202ENST00000533683 AKAP11Q9UKA4 1901 aa33.92■■■■□ 3.02
SAMD1-202ENST00000533683 MROH5Q6ZUA9 1318 aa33.92■■■■□ 3.02
SAMD1-202ENST00000533683 ZFYP08048 801 aaPredicted RBP33.92■■■■□ 3.02
SAMD1-202ENST00000533683 ZNF652Q9Y2D9 606 aa33.91■■■■□ 3.02
SAMD1-202ENST00000533683 GJB2P29033 226 aa33.91■■■■□ 3.02
SAMD1-202ENST00000533683 SEC31BQ9NQW1 1179 aa33.91■■■■□ 3.02
SAMD1-202ENST00000533683 SPATA31A6Q5VVP1 1343 aa33.9■■■■□ 3.02
SAMD1-202ENST00000533683 BCORQ6W2J9 1755 aa33.9■■■■□ 3.02
SAMD1-202ENST00000533683 STX6O43752 255 aa33.9■■■■□ 3.02
SAMD1-202ENST00000533683 HELBQ8NG08 1087 aaPredicted RBP33.9■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms