RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 SLC10A3P09131 477 aa18.91■□□□□ 0.62
CDC27-209ENST00000532893 SF3B3Q15393 1217 aaKnown RBP18.91■□□□□ 0.62
CDC27-209ENST00000532893 KIF4BQ2VIQ3 1234 aa18.91■□□□□ 0.62
CDC27-209ENST00000532893 SULF1Q8IWU6 871 aa18.91■□□□□ 0.62
CDC27-209ENST00000532893 ASTN2O75129 1339 aaPredicted RBP18.91■□□□□ 0.62
CDC27-209ENST00000532893 KRT24Q2M2I5 525 aa18.9■□□□□ 0.62
CDC27-209ENST00000532893 RTL5Q5HYW3 569 aaPredicted RBP18.9■□□□□ 0.62
CDC27-209ENST00000532893 EYA3Q99504 573 aa18.9■□□□□ 0.62
CDC27-209ENST00000532893 GGA3Q9NZ52 723 aa18.9■□□□□ 0.62
CDC27-209ENST00000532893 ATP5J2-PTCD1G3V325 749 aa18.89■□□□□ 0.61
CDC27-209ENST00000532893 VIL1P09327 827 aaKnown RBP18.89■□□□□ 0.61
CDC27-209ENST00000532893 CTU1Q7Z7A3 348 aaKnown RBP18.89■□□□□ 0.61
CDC27-209ENST00000532893 TBC1D16Q8TBP0 767 aa18.89■□□□□ 0.61
CDC27-209ENST00000532893 RPS8P62241 208 aaKnown RBP18.88■□□□□ 0.61
CDC27-209ENST00000532893 ANKRD13DQ6ZTN6 518 aa18.88■□□□□ 0.61
CDC27-209ENST00000532893 PLBD2Q8NHP8 589 aa18.88■□□□□ 0.61
CDC27-209ENST00000532893 CDCA5Q96FF9 252 aa18.88■□□□□ 0.61
CDC27-209ENST00000532893 ISCA1Q9BUE6 129 aa18.88■□□□□ 0.61
CDC27-209ENST00000532893 ZC3H12CQ9C0D7 883 aaKnown RBP18.88■□□□□ 0.61
CDC27-209ENST00000532893 CHPF2Q9P2E5 772 aa18.88■□□□□ 0.61
CDC27-209ENST00000532893 G3V3G9 751 aa18.87■□□□□ 0.61
CDC27-209ENST00000532893 KCNA4P22459 653 aa18.87■□□□□ 0.61
CDC27-209ENST00000532893 TMPOP42166 694 aaKnown RBP18.87■□□□□ 0.61
CDC27-209ENST00000532893 DCAF8Q5TAQ9 597 aa18.87■□□□□ 0.61
CDC27-209ENST00000532893 SCARF1Q14162 830 aa18.86■□□□□ 0.61
CDC27-209ENST00000532893 LAS1LQ9Y4W2 734 aaKnown RBP18.86■□□□□ 0.61
CDC27-209ENST00000532893 CHL1O00533 1208 aa18.85■□□□□ 0.61
CDC27-209ENST00000532893 IRS4O14654 1257 aaPredicted RBP18.85■□□□□ 0.61
CDC27-209ENST00000532893 LMOD3Q0VAK6 560 aa18.85■□□□□ 0.61
CDC27-209ENST00000532893 NEUROD2Q15784 382 aa18.85■□□□□ 0.61
CDC27-209ENST00000532893 ANGEL2Q5VTE6 544 aaKnown RBP18.85■□□□□ 0.61
CDC27-209ENST00000532893 RASAL3Q86YV0 1011 aa18.85■□□□□ 0.61
CDC27-209ENST00000532893 LRRC37AA6NMS7 1700 aa18.84■□□□□ 0.61
CDC27-209ENST00000532893 HDGFL1Q5TGJ6 251 aa18.84■□□□□ 0.61
CDC27-209ENST00000532893 PRPF38BQ5VTL8 546 aaKnown RBP18.84■□□□□ 0.61
CDC27-209ENST00000532893 REM2Q8IYK8 340 aaPredicted RBP18.84■□□□□ 0.61
CDC27-209ENST00000532893 ANKIB1Q9P2G1 1089 aa18.84■□□□□ 0.61
CDC27-209ENST00000532893 HPS5Q9UPZ3 1129 aa18.84■□□□□ 0.61
CDC27-209ENST00000532893 AKAP11Q9UKA4 1901 aa18.84■□□□□ 0.61
CDC27-209ENST00000532893 UFL1O94874 794 aa18.83■□□□□ 0.6
CDC27-209ENST00000532893 ZNF280AP59817 542 aaPredicted RBP18.83■□□□□ 0.6
CDC27-209ENST00000532893 AGBL3Q8NEM8 1001 aa18.83■□□□□ 0.6
CDC27-209ENST00000532893 SEC31BQ9NQW1 1179 aa18.83■□□□□ 0.6
CDC27-209ENST00000532893 PODXL2Q9NZ53 605 aa18.83■□□□□ 0.6
CDC27-209ENST00000532893 COL4A1P02462 1669 aa18.82■□□□□ 0.6
CDC27-209ENST00000532893 RSBN1LQ6PCB5 846 aaPredicted RBP18.82■□□□□ 0.6
CDC27-209ENST00000532893 MOB2Q70IA6 237 aa18.82■□□□□ 0.6
CDC27-209ENST00000532893 DBF4Q9UBU7 674 aaPredicted RBP18.82■□□□□ 0.6
CDC27-209ENST00000532893 GGA1Q9UJY5 639 aa18.82■□□□□ 0.6
CDC27-209ENST00000532893 HDAC9Q9UKV0 1011 aa18.82■□□□□ 0.6
CDC27-209ENST00000532893 SCAF8Q9UPN6 1271 aaKnown RBP18.82■□□□□ 0.6
CDC27-209ENST00000532893 TBC1D8O95759 1140 aa18.81■□□□□ 0.6
CDC27-209ENST00000532893 FKBP1BP68106 108 aa18.81■□□□□ 0.6
CDC27-209ENST00000532893 TRIM28Q13263 835 aaKnown RBP18.81■□□□□ 0.6
CDC27-209ENST00000532893 DDX60Q8IY21 1712 aaKnown RBP18.8■□□□□ 0.6
CDC27-209ENST00000532893 UBE2Q2LH0YL09 131 aa18.8■□□□□ 0.6
CDC27-209ENST00000532893 PKN2Q16513 984 aaKnown RBP18.8■□□□□ 0.6
CDC27-209ENST00000532893 PRAMEF18Q5VWM3 479 aa18.8■□□□□ 0.6
CDC27-209ENST00000532893 ZNF296Q8WUU4 475 aaPredicted RBP18.8■□□□□ 0.6
CDC27-209ENST00000532893 GMLQ99445 158 aa18.8■□□□□ 0.6
CDC27-209ENST00000532893 MYOZ2Q9NPC6 264 aa18.8■□□□□ 0.6
CDC27-209ENST00000532893 SCN9AQ15858 1988 aa18.8■□□□□ 0.6
CDC27-209ENST00000532893 USP17L8P0C7I0 530 aa18.79■□□□□ 0.6
CDC27-209ENST00000532893 CCDC146Q8IYE0 955 aa18.79■□□□□ 0.6
CDC27-209ENST00000532893 HYPKQ9NX55 129 aa18.79■□□□□ 0.6
CDC27-209ENST00000532893 ZBTB38Q8NAP3 1195 aaPredicted RBP18.78■□□□□ 0.6
CDC27-209ENST00000532893 USP17L3A6NCW0 530 aa18.77■□□□□ 0.6
CDC27-209ENST00000532893 USP17L4A6NCW7 530 aa18.77■□□□□ 0.6
CDC27-209ENST00000532893 HOXB7P09629 217 aa18.77■□□□□ 0.6
CDC27-209ENST00000532893 DUSP27Q5VZP5 1158 aa18.77■□□□□ 0.6
CDC27-209ENST00000532893 USP17L1Q7RTZ2 530 aa18.77■□□□□ 0.6
CDC27-209ENST00000532893 RIC3Q7Z5B4 369 aa18.77■□□□□ 0.6
CDC27-209ENST00000532893 CCDC85AQ96PX6 553 aaPredicted RBP18.77■□□□□ 0.6
CDC27-209ENST00000532893 TRIM35Q9UPQ4 493 aa18.77■□□□□ 0.6
CDC27-209ENST00000532893 PITPNM2Q9BZ72 1349 aa18.76■□□□□ 0.59
CDC27-209ENST00000532893 HSP90B1P14625 803 aaKnown RBP18.76■□□□□ 0.59
CDC27-209ENST00000532893 TTLL12Q14166 644 aaPredicted RBP18.76■□□□□ 0.59
CDC27-209ENST00000532893 NBPF9Q3BBW0 867 aa18.76■□□□□ 0.59
CDC27-209ENST00000532893 CCDC152Q4G0S7 254 aa18.76■□□□□ 0.59
CDC27-209ENST00000532893 JARID2Q92833 1246 aaPredicted RBP18.76■□□□□ 0.59
CDC27-209ENST00000532893 GPR25O00155 361 aa18.75■□□□□ 0.59
CDC27-209ENST00000532893 TM4SF4P48230 202 aa18.75■□□□□ 0.59
CDC27-209ENST00000532893 MKRN3Q13064 507 aaKnown RBP18.75■□□□□ 0.59
CDC27-209ENST00000532893 WTIPA6NIX2 430 aaPredicted RBP18.74■□□□□ 0.59
CDC27-209ENST00000532893 PODNQ7Z5L7 613 aa18.74■□□□□ 0.59
CDC27-209ENST00000532893 MYD88Q99836 296 aa18.74■□□□□ 0.59
CDC27-209ENST00000532893 PHAXQ9H814 394 aaKnown RBP18.74■□□□□ 0.59
CDC27-209ENST00000532893 ZNF609O15014 1411 aa18.74■□□□□ 0.59
CDC27-209ENST00000532893 XDHP47989 1333 aa18.74■□□□□ 0.59
CDC27-209ENST00000532893 PDE8AO60658 829 aa18.73■□□□□ 0.59
CDC27-209ENST00000532893 ATP2B4P23634 1241 aa18.73■□□□□ 0.59
CDC27-209ENST00000532893 GOLGA2Q08379 1002 aa18.73■□□□□ 0.59
CDC27-209ENST00000532893 ANKRD18AQ8IVF6 992 aa18.73■□□□□ 0.59
CDC27-209ENST00000532893 MXD3Q9BW11 206 aa18.73■□□□□ 0.59
CDC27-209ENST00000532893 PAPPA2Q9BXP8 1791 aa18.73■□□□□ 0.59
CDC27-209ENST00000532893 PCCAP05165 728 aaPredicted RBP18.72■□□□□ 0.59
CDC27-209ENST00000532893 FBXO46Q6PJ61 603 aaPredicted RBP18.72■□□□□ 0.59
CDC27-209ENST00000532893 R3HDMLQ9H3Y0 253 aa18.72■□□□□ 0.59
CDC27-209ENST00000532893 CCDC191Q8NCU4 936 aa18.71■□□□□ 0.59
CDC27-209ENST00000532893 RUNDC1Q96C34 613 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms