RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 SCN9AQ15858 1988 aa24.25■■□□□ 1.47
SSH3-209ENST00000532600 DOK7Q18PE1 504 aa24.24■■□□□ 1.47
SSH3-209ENST00000532600 DNAAF4Q8WXU2 420 aa24.24■■□□□ 1.47
SSH3-209ENST00000532600 GREM2Q9H772 168 aa24.24■■□□□ 1.47
SSH3-209ENST00000532600 ADARB2Q9NS39 739 aaKnown RBP24.24■■□□□ 1.47
SSH3-209ENST00000532600 RTL9Q8NET4 1388 aa24.24■■□□□ 1.47
SSH3-209ENST00000532600 WTIPA6NIX2 430 aaPredicted RBP24.23■■□□□ 1.47
SSH3-209ENST00000532600 TMEM88BA6NKF7 163 aa24.23■■□□□ 1.47
SSH3-209ENST00000532600 HIRAP54198 1017 aaPredicted RBP24.23■■□□□ 1.47
SSH3-209ENST00000532600 TNIP1Q15025 636 aa24.23■■□□□ 1.47
SSH3-209ENST00000532600 ZBTB12Q9Y330 459 aaPredicted RBP24.23■■□□□ 1.47
SSH3-209ENST00000532600 CNTNAP1P78357 1384 aa24.23■■□□□ 1.47
SSH3-209ENST00000532600 PSMD14O00487 310 aa24.22■■□□□ 1.47
SSH3-209ENST00000532600 ECE2O60344 883 aa24.22■■□□□ 1.47
SSH3-209ENST00000532600 ANKRD18AQ8IVF6 992 aa24.22■■□□□ 1.47
SSH3-209ENST00000532600 F6X3S4 739 aa24.21■■□□□ 1.47
SSH3-209ENST00000532600 UFL1O94874 794 aa24.21■■□□□ 1.47
SSH3-209ENST00000532600 LINS1Q8NG48 757 aa24.21■■□□□ 1.47
SSH3-209ENST00000532600 TRPM4Q8TD43 1214 aa24.21■■□□□ 1.47
SSH3-209ENST00000532600 EYA3Q99504 573 aa24.21■■□□□ 1.47
SSH3-209ENST00000532600 PLA2G12BQ9BX93 195 aa24.21■■□□□ 1.47
SSH3-209ENST00000532600 MYH16Q9H6N6 1097 aa24.21■■□□□ 1.47
SSH3-209ENST00000532600 ANKIB1Q9P2G1 1089 aa24.2■■□□□ 1.46
SSH3-209ENST00000532600 GGA1Q9UJY5 639 aa24.2■■□□□ 1.46
SSH3-209ENST00000532600 TRAF5O00463 557 aa24.19■■□□□ 1.46
SSH3-209ENST00000532600 BCL2L13Q9BXK5 485 aa24.19■■□□□ 1.46
SSH3-209ENST00000532600 PGAP2Q9UHJ9 254 aa24.19■■□□□ 1.46
SSH3-209ENST00000532600 CNOT7Q9UIV1 285 aaKnown RBP24.19■■□□□ 1.46
SSH3-209ENST00000532600 BEND3Q5T5X7 828 aa24.18■■□□□ 1.46
SSH3-209ENST00000532600 XDHP47989 1333 aa24.17■■□□□ 1.46
SSH3-209ENST00000532600 EGFRP00533 1210 aa24.17■■□□□ 1.46
SSH3-209ENST00000532600 CSF1RP07333 972 aa24.17■■□□□ 1.46
SSH3-209ENST00000532600 CST9Q5W186 159 aa24.17■■□□□ 1.46
SSH3-209ENST00000532600 MICALL2Q8IY33 904 aa24.17■■□□□ 1.46
SSH3-209ENST00000532600 DPF2Q92785 391 aa24.17■■□□□ 1.46
SSH3-209ENST00000532600 CDC5LQ99459 802 aaKnown RBP24.17■■□□□ 1.46
SSH3-209ENST00000532600 ZC3H12CQ9C0D7 883 aaKnown RBP24.17■■□□□ 1.46
SSH3-209ENST00000532600 BSDC1Q9NW68 430 aaPredicted RBP24.17■■□□□ 1.46
SSH3-209ENST00000532600 MINPP1Q9UNW1 487 aa24.17■■□□□ 1.46
SSH3-209ENST00000532600 TRPM7Q96QT4 1865 aa24.17■■□□□ 1.46
SSH3-209ENST00000532600 HSPA1AP0DMV8 641 aaKnown RBP24.16■■□□□ 1.46
SSH3-209ENST00000532600 HSPA1BP0DMV9 641 aaKnown RBP24.16■■□□□ 1.46
SSH3-209ENST00000532600 VEGFBP49765 207 aa24.16■■□□□ 1.46
SSH3-209ENST00000532600 FAM161AQ3B820 660 aa24.16■■□□□ 1.46
SSH3-209ENST00000532600 PSME4Q14997 1843 aa24.16■■□□□ 1.46
SSH3-209ENST00000532600 RASSF10A6NK89 507 aa24.15■■□□□ 1.46
SSH3-209ENST00000532600 IFFO2Q5TF58 517 aa24.15■■□□□ 1.46
SSH3-209ENST00000532600 SAMD7Q7Z3H4 446 aa24.15■■□□□ 1.46
SSH3-209ENST00000532600 VIL1P09327 827 aaKnown RBP24.14■■□□□ 1.45
SSH3-209ENST00000532600 GLIS2Q9BZE0 524 aaPredicted RBP24.14■■□□□ 1.45
SSH3-209ENST00000532600 ZNF646O15015 1829 aaPredicted RBP24.14■■□□□ 1.45
SSH3-209ENST00000532600 ITGA6P23229 1130 aa24.13■■□□□ 1.45
SSH3-209ENST00000532600 ATP2B4P23634 1241 aa24.13■■□□□ 1.45
SSH3-209ENST00000532600 FOXO4P98177 505 aa24.13■■□□□ 1.45
SSH3-209ENST00000532600 COL13A1Q5TAT6 717 aaPredicted RBP24.13■■□□□ 1.45
SSH3-209ENST00000532600 RPS12P25398 132 aaKnown RBP24.12■■□□□ 1.45
SSH3-209ENST00000532600 ZC3H15Q8WU90 426 aaKnown RBP24.12■■□□□ 1.45
SSH3-209ENST00000532600 H7C1D1 291 aa24.11■■□□□ 1.45
SSH3-209ENST00000532600 TBC1D10BQ4KMP7 808 aaPredicted RBP24.11■■□□□ 1.45
SSH3-209ENST00000532600 EPHA10Q5JZY3 1008 aa24.11■■□□□ 1.45
SSH3-209ENST00000532600 DLK2Q6UY11 383 aa24.11■■□□□ 1.45
SSH3-209ENST00000532600 ZNF609O15014 1411 aa24.1■■□□□ 1.45
SSH3-209ENST00000532600 CCT4P50991 539 aaKnown RBP24.1■■□□□ 1.45
SSH3-209ENST00000532600 DEFB115Q30KQ5 88 aa24.1■■□□□ 1.45
SSH3-209ENST00000532600 TXNRD3Q86VQ6 643 aa24.1■■□□□ 1.45
SSH3-209ENST00000532600 MED23Q9ULK4 1368 aa24.1■■□□□ 1.45
SSH3-209ENST00000532600 A0A1B0GUL6 1792 aa24.09■■□□□ 1.45
SSH3-209ENST00000532600 ABT1Q9ULW3 272 aaKnown RBP24.09■■□□□ 1.45
SSH3-209ENST00000532600 KLRK1P26718 216 aa24.08■■□□□ 1.45
SSH3-209ENST00000532600 IGHMBP2P38935 993 aaKnown RBP24.08■■□□□ 1.45
SSH3-209ENST00000532600 SLFN5Q08AF3 891 aa24.08■■□□□ 1.45
SSH3-209ENST00000532600 MRPL50Q8N5N7 158 aaKnown RBP24.08■■□□□ 1.45
SSH3-209ENST00000532600 GMLQ99445 158 aa24.08■■□□□ 1.45
SSH3-209ENST00000532600 POLR2AP24928 1970 aaKnown RBP24.07■■□□□ 1.44
SSH3-209ENST00000532600 THSD7BQ9C0I4 1608 aa24.07■■□□□ 1.44
SSH3-209ENST00000532600 RSBN1LQ6PCB5 846 aaPredicted RBP24.07■■□□□ 1.44
SSH3-209ENST00000532600 CDCA7LQ96GN5 454 aa24.07■■□□□ 1.44
SSH3-209ENST00000532600 TLL2Q9Y6L7 1015 aa24.07■■□□□ 1.44
SSH3-209ENST00000532600 E9PSI1 815 aa24.06■■□□□ 1.44
SSH3-209ENST00000532600 G3V3G9 751 aa24.06■■□□□ 1.44
SSH3-209ENST00000532600 GRM8O00222 908 aa24.06■■□□□ 1.44
SSH3-209ENST00000532600 RBM26Q5T8P6 1007 aaKnown RBP24.06■■□□□ 1.44
SSH3-209ENST00000532600 DCAF8Q5TAQ9 597 aa24.06■■□□□ 1.44
SSH3-209ENST00000532600 ASTN2O75129 1339 aaPredicted RBP24.06■■□□□ 1.44
SSH3-209ENST00000532600 WDR33Q9C0J8 1336 aaKnown RBP24.06■■□□□ 1.44
SSH3-209ENST00000532600 IRS2Q9Y4H2 1338 aa24.06■■□□□ 1.44
SSH3-209ENST00000532600 ALDH1L1O75891 902 aa24.05■■□□□ 1.44
SSH3-209ENST00000532600 CELF2O95319 508 aaKnown RBP24.05■■□□□ 1.44
SSH3-209ENST00000532600 ZNF280AP59817 542 aaPredicted RBP24.05■■□□□ 1.44
SSH3-209ENST00000532600 CDC37L1Q7L3B6 337 aa24.05■■□□□ 1.44
SSH3-209ENST00000532600 PODNQ7Z5L7 613 aa24.05■■□□□ 1.44
SSH3-209ENST00000532600 USP48Q86UV5 1035 aa24.05■■□□□ 1.44
SSH3-209ENST00000532600 ANKRD18BA2A2Z9 1011 aa24.04■■□□□ 1.44
SSH3-209ENST00000532600 SNAP23O00161 211 aa24.04■■□□□ 1.44
SSH3-209ENST00000532600 CHRNDQ07001 517 aa24.04■■□□□ 1.44
SSH3-209ENST00000532600 KIF4BQ2VIQ3 1234 aa24.04■■□□□ 1.44
SSH3-209ENST00000532600 SLC4A10Q6U841 1118 aa24.04■■□□□ 1.44
SSH3-209ENST00000532600 LMBR1LQ6UX01 489 aa24.04■■□□□ 1.44
SSH3-209ENST00000532600 AGBL3Q8NEM8 1001 aa24.04■■□□□ 1.44
SSH3-209ENST00000532600 SSH1Q8WYL5 1049 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms