RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 PLBD2Q8NHP8 589 aa12.04□□□□□ -0.48
VPS26B-207ENST00000532160 CELF1Q92879 486 aaKnown RBP12.04□□□□□ -0.48
VPS26B-207ENST00000532160 BCL2L13Q9BXK5 485 aa12.04□□□□□ -0.48
VPS26B-207ENST00000532160 MYH16Q9H6N6 1097 aa12.04□□□□□ -0.48
VPS26B-207ENST00000532160 CDHR2Q9BYE9 1310 aa12.04□□□□□ -0.48
VPS26B-207ENST00000532160 POLR2AP24928 1970 aaKnown RBP12.03□□□□□ -0.48
VPS26B-207ENST00000532160 ATXN8OSP0DMR3 200 aa12.03□□□□□ -0.48
VPS26B-207ENST00000532160 ECE1P42892 770 aa12.03□□□□□ -0.48
VPS26B-207ENST00000532160 TNIP1Q15025 636 aa12.03□□□□□ -0.48
VPS26B-207ENST00000532160 DUSP27Q5VZP5 1158 aa12.03□□□□□ -0.48
VPS26B-207ENST00000532160 GPR101Q96P66 508 aaPredicted RBP12.03□□□□□ -0.48
VPS26B-207ENST00000532160 DBF4Q9UBU7 674 aaPredicted RBP12.03□□□□□ -0.48
VPS26B-207ENST00000532160 ZBTB12Q9Y330 459 aaPredicted RBP12.03□□□□□ -0.48
VPS26B-207ENST00000532160 SCN9AQ15858 1988 aa12.02□□□□□ -0.49
VPS26B-207ENST00000532160 SF3B3Q15393 1217 aaKnown RBP12.02□□□□□ -0.49
VPS26B-207ENST00000532160 TMC4Q7Z404 712 aa12.02□□□□□ -0.49
VPS26B-207ENST00000532160 SAPCD2Q86UD0 394 aa12.02□□□□□ -0.49
VPS26B-207ENST00000532160 MICALL2Q8IY33 904 aa12.02□□□□□ -0.49
VPS26B-207ENST00000532160 TRMT2AQ8IZ69 625 aaKnown RBP12.02□□□□□ -0.49
VPS26B-207ENST00000532160 ZNF408Q9H9D4 720 aa12.02□□□□□ -0.49
VPS26B-207ENST00000532160 DBNDD1Q9H9R9 158 aa12.02□□□□□ -0.49
VPS26B-207ENST00000532160 POLLQ9UGP5 575 aa12.02□□□□□ -0.49
VPS26B-207ENST00000532160 PGAP2Q9UHJ9 254 aa12.02□□□□□ -0.49
VPS26B-207ENST00000532160 CNOT7Q9UIV1 285 aaKnown RBP12.02□□□□□ -0.49
VPS26B-207ENST00000532160 PSMD14O00487 310 aa12.01□□□□□ -0.49
VPS26B-207ENST00000532160 EGFRP00533 1210 aa12.01□□□□□ -0.49
VPS26B-207ENST00000532160 GPSM2P81274 684 aa12.01□□□□□ -0.49
VPS26B-207ENST00000532160 WASHC4Q2M389 1173 aa12.01□□□□□ -0.49
VPS26B-207ENST00000532160 TWISTNBQ3B726 338 aaPredicted RBP12.01□□□□□ -0.49
VPS26B-207ENST00000532160 DLK2Q6UY11 383 aa12.01□□□□□ -0.49
VPS26B-207ENST00000532160 HYPKQ9NX55 129 aa12.01□□□□□ -0.49
VPS26B-207ENST00000532160 TSKSQ9UJT2 592 aa12.01□□□□□ -0.49
VPS26B-207ENST00000532160 NSFL1CQ9UNZ2 370 aaKnown RBP12.01□□□□□ -0.49
VPS26B-207ENST00000532160 CASP8AP2Q9UKL3 1982 aa12□□□□□ -0.49
VPS26B-207ENST00000532160 IRS4O14654 1257 aaPredicted RBP12□□□□□ -0.49
VPS26B-207ENST00000532160 RIMBP2O15034 1052 aa12□□□□□ -0.49
VPS26B-207ENST00000532160 TRIM28Q13263 835 aaKnown RBP12□□□□□ -0.49
VPS26B-207ENST00000532160 SAMD7Q7Z3H4 446 aa12□□□□□ -0.49
VPS26B-207ENST00000532160 ZC3H15Q8WU90 426 aaKnown RBP12□□□□□ -0.49
VPS26B-207ENST00000532160 ABHD8Q96I13 439 aa12□□□□□ -0.49
VPS26B-207ENST00000532160 BEGAINQ9BUH8 593 aa12□□□□□ -0.49
VPS26B-207ENST00000532160 KCNQ5Q9NR82 932 aa12□□□□□ -0.49
VPS26B-207ENST00000532160 RTL9Q8NET4 1388 aa12□□□□□ -0.49
VPS26B-207ENST00000532160 C6orf229H3BNL8 230 aa11.99□□□□□ -0.49
VPS26B-207ENST00000532160 H7C1D1 291 aa11.99□□□□□ -0.49
VPS26B-207ENST00000532160 ECE2O60344 883 aa11.99□□□□□ -0.49
VPS26B-207ENST00000532160 VAMP4O75379 141 aa11.99□□□□□ -0.49
VPS26B-207ENST00000532160 MAP2K2P36507 400 aa11.99□□□□□ -0.49
VPS26B-207ENST00000532160 DOK7Q18PE1 504 aa11.99□□□□□ -0.49
VPS26B-207ENST00000532160 USP48Q86UV5 1035 aa11.99□□□□□ -0.49
VPS26B-207ENST00000532160 PHAXQ9H814 394 aaKnown RBP11.99□□□□□ -0.49
VPS26B-207ENST00000532160 RPS8P62241 208 aaKnown RBP11.98□□□□□ -0.49
VPS26B-207ENST00000532160 TBC1D10BQ4KMP7 808 aaPredicted RBP11.98□□□□□ -0.49
VPS26B-207ENST00000532160 CDC37L1Q7L3B6 337 aa11.98□□□□□ -0.49
VPS26B-207ENST00000532160 RIC3Q7Z5B4 369 aa11.98□□□□□ -0.49
VPS26B-207ENST00000532160 ZBTB38Q8NAP3 1195 aaPredicted RBP11.98□□□□□ -0.49
VPS26B-207ENST00000532160 TBC1D16Q8TBP0 767 aa11.98□□□□□ -0.49
VPS26B-207ENST00000532160 DPF2Q92785 391 aa11.98□□□□□ -0.49
VPS26B-207ENST00000532160 HHIPL1Q96JK4 782 aa11.98□□□□□ -0.49
VPS26B-207ENST00000532160 SEC31BQ9NQW1 1179 aa11.98□□□□□ -0.49
VPS26B-207ENST00000532160 ABCB7O75027 752 aa11.97□□□□□ -0.49
VPS26B-207ENST00000532160 NEFLP07196 543 aa11.97□□□□□ -0.49
VPS26B-207ENST00000532160 JARID2Q92833 1246 aaPredicted RBP11.97□□□□□ -0.49
VPS26B-207ENST00000532160 ZIC5Q96T25 663 aa11.97□□□□□ -0.49
VPS26B-207ENST00000532160 EYA3Q99504 573 aa11.97□□□□□ -0.49
VPS26B-207ENST00000532160 MYD88Q99836 296 aa11.97□□□□□ -0.49
VPS26B-207ENST00000532160 PSME4Q14997 1843 aa11.96□□□□□ -0.49
VPS26B-207ENST00000532160 ADM5C9JUS6 153 aa11.96□□□□□ -0.49
VPS26B-207ENST00000532160 RPS12P25398 132 aaKnown RBP11.96□□□□□ -0.49
VPS26B-207ENST00000532160 RBM26Q5T8P6 1007 aaKnown RBP11.96□□□□□ -0.49
VPS26B-207ENST00000532160 KRT26Q7Z3Y9 468 aa11.96□□□□□ -0.49
VPS26B-207ENST00000532160 CCDC85AQ96PX6 553 aaPredicted RBP11.96□□□□□ -0.49
VPS26B-207ENST00000532160 ASTN2O75129 1339 aaPredicted RBP11.95□□□□□ -0.5
VPS26B-207ENST00000532160 UFL1O94874 794 aa11.95□□□□□ -0.5
VPS26B-207ENST00000532160 BRPF1P55201 1214 aaPredicted RBP11.95□□□□□ -0.5
VPS26B-207ENST00000532160 HUNKP57058 714 aa11.95□□□□□ -0.5
VPS26B-207ENST00000532160 PODXL2Q9NZ53 605 aa11.95□□□□□ -0.5
VPS26B-207ENST00000532160 SPEF2Q9C093 1822 aa11.95□□□□□ -0.5
VPS26B-207ENST00000532160 MYH3P11055 1940 aa11.94□□□□□ -0.5
VPS26B-207ENST00000532160 PCCAP05165 728 aaPredicted RBP11.94□□□□□ -0.5
VPS26B-207ENST00000532160 VIL1P09327 827 aaKnown RBP11.94□□□□□ -0.5
VPS26B-207ENST00000532160 KIF4BQ2VIQ3 1234 aa11.94□□□□□ -0.5
VPS26B-207ENST00000532160 CCDC152Q4G0S7 254 aa11.94□□□□□ -0.5
VPS26B-207ENST00000532160 CCDC30Q5VVM6 783 aa11.94□□□□□ -0.5
VPS26B-207ENST00000532160 ERICH6BQ5W0A0 696 aa11.94□□□□□ -0.5
VPS26B-207ENST00000532160 G2E3Q7L622 706 aa11.94□□□□□ -0.5
VPS26B-207ENST00000532160 CCDC191Q8NCU4 936 aa11.94□□□□□ -0.5
VPS26B-207ENST00000532160 ZC3H12CQ9C0D7 883 aaKnown RBP11.94□□□□□ -0.5
VPS26B-207ENST00000532160 GBA2Q9HCG7 927 aaPredicted RBP11.94□□□□□ -0.5
VPS26B-207ENST00000532160 CWC25Q9NXE8 425 aaPredicted RBP11.94□□□□□ -0.5
VPS26B-207ENST00000532160 ANKIB1Q9P2G1 1089 aa11.94□□□□□ -0.5
VPS26B-207ENST00000532160 GGA1Q9UJY5 639 aa11.94□□□□□ -0.5
VPS26B-207ENST00000532160 CCDC85CA6NKD9 419 aa11.93□□□□□ -0.5
VPS26B-207ENST00000532160 CA12O43570 354 aa11.93□□□□□ -0.5
VPS26B-207ENST00000532160 PDE8AO60658 829 aa11.93□□□□□ -0.5
VPS26B-207ENST00000532160 NOGQ13253 232 aa11.93□□□□□ -0.5
VPS26B-207ENST00000532160 FAM161AQ3B820 660 aa11.93□□□□□ -0.5
VPS26B-207ENST00000532160 SSH1Q8WYL5 1049 aa11.93□□□□□ -0.5
VPS26B-207ENST00000532160 METTL22Q9BUU2 404 aaPredicted RBP11.93□□□□□ -0.5
VPS26B-207ENST00000532160 STK31Q9BXU1 1019 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms