RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 HAUS7Q99871 368 aa13.75□□□□□ -0.21
USP35-207ENST00000530546 ZSWIM6Q9HCJ5 1215 aa13.75□□□□□ -0.21
USP35-207ENST00000530546 NECAB1Q8N987 351 aa13.74□□□□□ -0.21
USP35-207ENST00000530546 ACSBG1Q96GR2 724 aa13.74□□□□□ -0.21
USP35-207ENST00000530546 GDPD2Q9HCC8 539 aa13.74□□□□□ -0.21
USP35-207ENST00000530546 RBM27Q9P2N5 1060 aaKnown RBP13.74□□□□□ -0.21
USP35-207ENST00000530546 SMC3Q9UQE7 1217 aa13.74□□□□□ -0.21
USP35-207ENST00000530546 ZBTB1Q9Y2K1 713 aa13.74□□□□□ -0.21
USP35-207ENST00000530546 TBC1D2BQ9UPU7 963 aa13.74□□□□□ -0.21
USP35-207ENST00000530546 A0A1B0GUL7 405 aa13.74□□□□□ -0.21
USP35-207ENST00000530546 TAF5LO75529 589 aa13.74□□□□□ -0.21
USP35-207ENST00000530546 VPS53Q5VIR6 699 aa13.74□□□□□ -0.21
USP35-207ENST00000530546 CEP126Q9P2H0 1117 aa13.74□□□□□ -0.21
USP35-207ENST00000530546 MED23Q9ULK4 1368 aa13.73□□□□□ -0.21
USP35-207ENST00000530546 RNF20Q5VTR2 975 aa13.73□□□□□ -0.21
USP35-207ENST00000530546 LRSAM1Q6UWE0 723 aa13.73□□□□□ -0.21
USP35-207ENST00000530546 MAP3K15Q6ZN16 1313 aa13.73□□□□□ -0.21
USP35-207ENST00000530546 CYP19A1P11511 503 aaPredicted RBP13.73□□□□□ -0.21
USP35-207ENST00000530546 GTF2E1P29083 439 aaPredicted RBP13.73□□□□□ -0.21
USP35-207ENST00000530546 GORABQ5T7V8 394 aa13.73□□□□□ -0.21
USP35-207ENST00000530546 GPT2Q8TD30 523 aa13.73□□□□□ -0.21
USP35-207ENST00000530546 KCNB2Q92953 911 aa13.73□□□□□ -0.21
USP35-207ENST00000530546 TM6SF1Q9BZW5 370 aa13.73□□□□□ -0.21
USP35-207ENST00000530546 SNRKQ9NRH2 765 aa13.73□□□□□ -0.21
USP35-207ENST00000530546 PAPPAQ13219 1627 aa13.73□□□□□ -0.21
USP35-207ENST00000530546 IFIT1P09914 478 aaKnown RBP13.72□□□□□ -0.21
USP35-207ENST00000530546 PIP4K2BP78356 416 aa13.72□□□□□ -0.21
USP35-207ENST00000530546 BLOC1S2Q6QNY1 142 aa13.72□□□□□ -0.21
USP35-207ENST00000530546 PAG1Q9NWQ8 432 aa13.72□□□□□ -0.21
USP35-207ENST00000530546 NSFL1CQ9UNZ2 370 aaKnown RBP13.72□□□□□ -0.21
USP35-207ENST00000530546 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.72□□□□□ -0.21
USP35-207ENST00000530546 FAM177BA6PVY3 158 aa13.72□□□□□ -0.21
USP35-207ENST00000530546 GIGYF2Q6Y7W6 1299 aaKnown RBP13.72□□□□□ -0.21
USP35-207ENST00000530546 WDR33Q9C0J8 1336 aaKnown RBP13.72□□□□□ -0.21
USP35-207ENST00000530546 ZNF609O15014 1411 aa13.72□□□□□ -0.21
USP35-207ENST00000530546 PCCAP05165 728 aaPredicted RBP13.71□□□□□ -0.21
USP35-207ENST00000530546 PSMA5P28066 241 aa13.71□□□□□ -0.21
USP35-207ENST00000530546 ADORA1P30542 326 aa13.71□□□□□ -0.21
USP35-207ENST00000530546 FKBP4Q02790 459 aaKnown RBP eCLIP13.71□□□□□ -0.21
USP35-207ENST00000530546 ME3Q16798 604 aa13.71□□□□□ -0.21
USP35-207ENST00000530546 KBTBD3Q8NAB2 608 aa13.71□□□□□ -0.21
USP35-207ENST00000530546 DISP2A7MBM2 1401 aa13.71□□□□□ -0.21
USP35-207ENST00000530546 IFIT5Q13325 482 aaKnown RBP13.71□□□□□ -0.21
USP35-207ENST00000530546 MCMDC2Q4G0Z9 681 aa13.71□□□□□ -0.21
USP35-207ENST00000530546 ZBTB38Q8NAP3 1195 aaPredicted RBP13.71□□□□□ -0.21
USP35-207ENST00000530546 TPCN1Q9ULQ1 816 aa13.71□□□□□ -0.21
USP35-207ENST00000530546 NUP188Q5SRE5 1749 aa13.71□□□□□ -0.21
USP35-207ENST00000530546 BCL9O00512 1426 aa13.71□□□□□ -0.21
USP35-207ENST00000530546 ROBO1Q9Y6N7 1651 aa13.71□□□□□ -0.22
USP35-207ENST00000530546 RPAP1Q9BWH6 1393 aaPredicted RBP13.71□□□□□ -0.22
USP35-207ENST00000530546 GJB2P29033 226 aa13.71□□□□□ -0.22
USP35-207ENST00000530546 NLRP10Q86W26 655 aa13.71□□□□□ -0.22
USP35-207ENST00000530546 SYT1P21579 422 aa13.7□□□□□ -0.22
USP35-207ENST00000530546 STK3Q13188 491 aa13.7□□□□□ -0.22
USP35-207ENST00000530546 TRIM28Q13263 835 aaKnown RBP13.7□□□□□ -0.22
USP35-207ENST00000530546 DDB1Q16531 1140 aa13.7□□□□□ -0.22
USP35-207ENST00000530546 ZNF710Q8N1W2 664 aa13.7□□□□□ -0.22
USP35-207ENST00000530546 TRMT112Q9UI30 125 aaKnown RBP13.7□□□□□ -0.22
USP35-207ENST00000530546 TJP1Q07157 1748 aa13.7□□□□□ -0.22
USP35-207ENST00000530546 CIAO1O76071 339 aa13.7□□□□□ -0.22
USP35-207ENST00000530546 DZIP3Q86Y13 1208 aaKnown RBP13.7□□□□□ -0.22
USP35-207ENST00000530546 GPR108Q9NPR9 543 aa13.7□□□□□ -0.22
USP35-207ENST00000530546 ZSCAN31Q96LW9 406 aaPredicted RBP13.69□□□□□ -0.22
USP35-207ENST00000530546 GREM2Q9H772 168 aa13.69□□□□□ -0.22
USP35-207ENST00000530546 STX6O43752 255 aa13.69□□□□□ -0.22
USP35-207ENST00000530546 RPS6KB1P23443 525 aa13.69□□□□□ -0.22
USP35-207ENST00000530546 ST3GAL1Q11201 340 aa13.69□□□□□ -0.22
USP35-207ENST00000530546 TTC39AQ5SRH9 613 aa13.69□□□□□ -0.22
USP35-207ENST00000530546 XAGE2Q96GT9 111 aa13.69□□□□□ -0.22
USP35-207ENST00000530546 VPS37CA5D8V6 355 aaPredicted RBP13.68□□□□□ -0.22
USP35-207ENST00000530546 IRS4O14654 1257 aaPredicted RBP13.68□□□□□ -0.22
USP35-207ENST00000530546 ZSCAN22P10073 491 aaPredicted RBP13.68□□□□□ -0.22
USP35-207ENST00000530546 CBX1P83916 185 aa13.68□□□□□ -0.22
USP35-207ENST00000530546 METTL24Q5JXM2 366 aa13.68□□□□□ -0.22
USP35-207ENST00000530546 SH2B1Q9NRF2 756 aaPredicted RBP13.68□□□□□ -0.22
USP35-207ENST00000530546 COL14A1Q05707 1796 aaKnown RBP13.68□□□□□ -0.22
USP35-207ENST00000530546 ITGA6P23229 1130 aa13.68□□□□□ -0.22
USP35-207ENST00000530546 CCDC158Q5M9N0 1113 aa13.68□□□□□ -0.22
USP35-207ENST00000530546 DNTTIP2Q5QJE6 756 aaKnown RBP13.68□□□□□ -0.22
USP35-207ENST00000530546 LDHAL6AQ6ZMR3 332 aa13.68□□□□□ -0.22
USP35-207ENST00000530546 LRRC2Q9BYS8 371 aa13.68□□□□□ -0.22
USP35-207ENST00000530546 GADD45BO75293 160 aaPredicted RBP13.68□□□□□ -0.22
USP35-207ENST00000530546 PTMAP06454 111 aaKnown RBP13.68□□□□□ -0.22
USP35-207ENST00000530546 PIBF1Q8WXW3 757 aa13.68□□□□□ -0.22
USP35-207ENST00000530546 CNNM1Q9NRU3 951 aa13.68□□□□□ -0.22
USP35-207ENST00000530546 HMG20BQ9P0W2 317 aa13.68□□□□□ -0.22
USP35-207ENST00000530546 TMEM63CQ9P1W3 806 aa13.68□□□□□ -0.22
USP35-207ENST00000530546 KIF3AQ9Y496 699 aa13.68□□□□□ -0.22
USP35-207ENST00000530546 U3KPZ7 1027 aaPredicted RBP13.68□□□□□ -0.22
USP35-207ENST00000530546 CYP21A2P08686 494 aa13.67□□□□□ -0.22
USP35-207ENST00000530546 HSP90AB3PQ58FF7 597 aa13.67□□□□□ -0.22
USP35-207ENST00000530546 TTLL11Q8NHH1 800 aa13.67□□□□□ -0.22
USP35-207ENST00000530546 CNPY2Q9Y2B0 182 aa13.67□□□□□ -0.22
USP35-207ENST00000530546 MBD3O95983 291 aa13.67□□□□□ -0.22
USP35-207ENST00000530546 CSF1RP07333 972 aa13.67□□□□□ -0.22
USP35-207ENST00000530546 SCARF1Q14162 830 aa13.67□□□□□ -0.22
USP35-207ENST00000530546 PI16Q6UXB8 463 aa13.67□□□□□ -0.22
USP35-207ENST00000530546 USP48Q86UV5 1035 aa13.67□□□□□ -0.22
USP35-207ENST00000530546 NEK1Q96PY6 1258 aa13.67□□□□□ -0.22
USP35-207ENST00000530546 AKAP2Q9Y2D5 859 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms