RNA–Protein interactions for RNA: ENST00000530535.5

USP35-206, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2

Gene USP35, Length 2,125 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-206ENST00000530535 ANKRD13DQ6ZTN6 518 aa18.5■□□□□ 0.55
USP35-206ENST00000530535 CCDC8Q9H0W5 538 aaPredicted RBP18.5■□□□□ 0.55
USP35-206ENST00000530535 TPRNQ4KMQ1 711 aa18.5■□□□□ 0.55
USP35-206ENST00000530535 KDM4AO75164 1064 aa18.49■□□□□ 0.55
USP35-206ENST00000530535 TAF6LQ9Y6J9 622 aa18.49■□□□□ 0.55
USP35-206ENST00000530535 VPS37CA5D8V6 355 aaPredicted RBP18.49■□□□□ 0.55
USP35-206ENST00000530535 RBM10P98175 930 aaKnown RBP18.49■□□□□ 0.55
USP35-206ENST00000530535 SEPT12Q8IYM1 358 aa18.49■□□□□ 0.55
USP35-206ENST00000530535 PIBF1Q8WXW3 757 aa18.49■□□□□ 0.55
USP35-206ENST00000530535 ZNF830Q96NB3 372 aaPredicted RBP18.49■□□□□ 0.55
USP35-206ENST00000530535 AP5Z1O43299 807 aa18.48■□□□□ 0.55
USP35-206ENST00000530535 G3BP1Q13283 466 aaKnown RBP eCLIP18.48■□□□□ 0.55
USP35-206ENST00000530535 MPNDQ8N594 471 aa18.48■□□□□ 0.55
USP35-206ENST00000530535 CDC37L1Q7L3B6 337 aa18.47■□□□□ 0.55
USP35-206ENST00000530535 TTC6Q86TZ1 520 aa18.47■□□□□ 0.55
USP35-206ENST00000530535 ALDH8A1Q9H2A2 487 aaPredicted RBP18.47■□□□□ 0.55
USP35-206ENST00000530535 DYNC1I1O14576 645 aa18.47■□□□□ 0.55
USP35-206ENST00000530535 METTL22Q9BUU2 404 aaPredicted RBP18.47■□□□□ 0.55
USP35-206ENST00000530535 BOLA2Q9H3K6 86 aa18.47■□□□□ 0.55
USP35-206ENST00000530535 TTC12Q9H892 705 aaPredicted RBP18.47■□□□□ 0.55
USP35-206ENST00000530535 CYP19A1P11511 503 aaPredicted RBP18.46■□□□□ 0.55
USP35-206ENST00000530535 PSMA5P28066 241 aa18.46■□□□□ 0.55
USP35-206ENST00000530535 TOB2Q14106 344 aaPredicted RBP18.46■□□□□ 0.55
USP35-206ENST00000530535 ZNF589Q86UQ0 364 aaPredicted RBP18.46■□□□□ 0.55
USP35-206ENST00000530535 PLBD2Q8NHP8 589 aa18.46■□□□□ 0.55
USP35-206ENST00000530535 KLHDC4Q8TBB5 520 aa18.46■□□□□ 0.55
USP35-206ENST00000530535 SMARCC1Q92922 1105 aaPredicted RBP18.46■□□□□ 0.55
USP35-206ENST00000530535 RPS6KB1P23443 525 aa18.46■□□□□ 0.55
USP35-206ENST00000530535 KCNJ4P48050 445 aa18.46■□□□□ 0.55
USP35-206ENST00000530535 NEXNQ0ZGT2 675 aa18.46■□□□□ 0.55
USP35-206ENST00000530535 EPHA10Q5JZY3 1008 aa18.46■□□□□ 0.55
USP35-206ENST00000530535 FSD1Q9BTV5 496 aa18.46■□□□□ 0.55
USP35-206ENST00000530535 ELP1O95163 1332 aa18.45■□□□□ 0.54
USP35-206ENST00000530535 NEURL1BA8MQ27 555 aa18.45■□□□□ 0.54
USP35-206ENST00000530535 TSGA10IPQ3SY00 556 aa18.45■□□□□ 0.54
USP35-206ENST00000530535 FAM182BQ5T319 152 aa18.45■□□□□ 0.54
USP35-206ENST00000530535 LARP1BQ659C4 914 aaKnown RBP18.45■□□□□ 0.54
USP35-206ENST00000530535 SIL1Q9H173 461 aa18.45■□□□□ 0.54
USP35-206ENST00000530535 COL15A1P39059 1388 aa18.45■□□□□ 0.54
USP35-206ENST00000530535 LOC102724428A0A0B4J2F2 783 aa18.44■□□□□ 0.54
USP35-206ENST00000530535 SIK1P57059 783 aa18.44■□□□□ 0.54
USP35-206ENST00000530535 BLOC1S2Q6QNY1 142 aa18.44■□□□□ 0.54
USP35-206ENST00000530535 TTLL7Q6ZT98 887 aa18.44■□□□□ 0.54
USP35-206ENST00000530535 TCEANC2Q96MN5 208 aa18.44■□□□□ 0.54
USP35-206ENST00000530535 SPTLC3Q9NUV7 552 aa18.44■□□□□ 0.54
USP35-206ENST00000530535 PALLDQ8WX93 1383 aa18.44■□□□□ 0.54
USP35-206ENST00000530535 PDIA4P13667 645 aaKnown RBP18.44■□□□□ 0.54
USP35-206ENST00000530535 ATP6V1AP38606 617 aa18.44■□□□□ 0.54
USP35-206ENST00000530535 NOLC1Q14978 699 aaKnown RBP eCLIP18.44■□□□□ 0.54
USP35-206ENST00000530535 MYD88Q99836 296 aa18.44■□□□□ 0.54
USP35-206ENST00000530535 FAM13BQ9NYF5 915 aa18.44■□□□□ 0.54
USP35-206ENST00000530535 KRT85P78386 507 aa18.43■□□□□ 0.54
USP35-206ENST00000530535 GCKRQ14397 625 aa18.43■□□□□ 0.54
USP35-206ENST00000530535 ZNF772Q68DY9 489 aaPredicted RBP18.43■□□□□ 0.54
USP35-206ENST00000530535 FAM173BQ6P4H8 233 aa18.43■□□□□ 0.54
USP35-206ENST00000530535 TAF5LO75529 589 aa18.43■□□□□ 0.54
USP35-206ENST00000530535 LIG1P18858 919 aa18.43■□□□□ 0.54
USP35-206ENST00000530535 ANKRD1Q15327 319 aa18.43■□□□□ 0.54
USP35-206ENST00000530535 RNF20Q5VTR2 975 aa18.43■□□□□ 0.54
USP35-206ENST00000530535 USPL1Q5W0Q7 1092 aa18.43■□□□□ 0.54
USP35-206ENST00000530535 FERMT3Q86UX7 667 aa18.43■□□□□ 0.54
USP35-206ENST00000530535 C17orf53Q8N3J3 647 aaPredicted RBP18.43■□□□□ 0.54
USP35-206ENST00000530535 MAP7D2Q96T17 732 aa18.43■□□□□ 0.54
USP35-206ENST00000530535 PTF1AQ7RTS3 328 aa18.42■□□□□ 0.54
USP35-206ENST00000530535 EDC3Q96F86 508 aaKnown RBP18.42■□□□□ 0.54
USP35-206ENST00000530535 HMG20BQ9P0W2 317 aa18.42■□□□□ 0.54
USP35-206ENST00000530535 ZNF330Q9Y3S2 320 aaPredicted RBP18.42■□□□□ 0.54
USP35-206ENST00000530535 PDCP20941 246 aa18.41■□□□□ 0.54
USP35-206ENST00000530535 RFX5P48382 616 aaPredicted RBP18.41■□□□□ 0.54
USP35-206ENST00000530535 MYRIPQ8NFW9 859 aa18.41■□□□□ 0.54
USP35-206ENST00000530535 COPRSQ9NQ92 184 aa18.41■□□□□ 0.54
USP35-206ENST00000530535 TJP1Q07157 1748 aa18.41■□□□□ 0.54
USP35-206ENST00000530535 CCDC192P0DO97 292 aa18.41■□□□□ 0.54
USP35-206ENST00000530535 KCNF1Q9H3M0 494 aa18.41■□□□□ 0.54
USP35-206ENST00000530535 DBNLQ9UJU6 430 aaKnown RBP18.41■□□□□ 0.54
USP35-206ENST00000530535 ZBTB1Q9Y2K1 713 aa18.4■□□□□ 0.54
USP35-206ENST00000530535 ATP5JP18859 108 aa18.4■□□□□ 0.54
USP35-206ENST00000530535 ITPK1Q13572 414 aa18.4■□□□□ 0.54
USP35-206ENST00000530535 FBXO41Q8TF61 875 aa18.4■□□□□ 0.54
USP35-206ENST00000530535 ZBTB3Q9H5J0 574 aa18.4■□□□□ 0.54
USP35-206ENST00000530535 MRVI1Q9Y6F6 885 aa18.4■□□□□ 0.54
USP35-206ENST00000530535 RFX7Q2KHR2 1363 aa18.39■□□□□ 0.54
USP35-206ENST00000530535 ARFGEF2Q9Y6D5 1785 aa18.39■□□□□ 0.53
USP35-206ENST00000530535 RBM6P78332 1123 aaKnown RBP18.39■□□□□ 0.53
USP35-206ENST00000530535 NUP62CLQ9H1M0 184 aa18.39■□□□□ 0.53
USP35-206ENST00000530535 AFDNP55196 1824 aaKnown RBP18.39■□□□□ 0.53
USP35-206ENST00000530535 ZNF609O15014 1411 aa18.39■□□□□ 0.53
USP35-206ENST00000530535 ATP5J2-PTCD1G3V325 749 aa18.38■□□□□ 0.53
USP35-206ENST00000530535 MAP3K11Q16584 847 aa18.38■□□□□ 0.53
USP35-206ENST00000530535 RBM43Q6ZSC3 357 aaKnown RBP18.38■□□□□ 0.53
USP35-206ENST00000530535 PRIMPOLQ96LW4 560 aa18.38■□□□□ 0.53
USP35-206ENST00000530535 IL6STP40189 918 aaPredicted RBP18.38■□□□□ 0.53
USP35-206ENST00000530535 PTPN12Q05209 780 aaKnown RBP18.38■□□□□ 0.53
USP35-206ENST00000530535 TYRO3Q06418 890 aa18.38■□□□□ 0.53
USP35-206ENST00000530535 TNNI3KQ59H18 835 aa18.38■□□□□ 0.53
USP35-206ENST00000530535 KIF6Q6ZMV9 814 aa18.38■□□□□ 0.53
USP35-206ENST00000530535 KIAA1524Q8TCG1 905 aa18.38■□□□□ 0.53
USP35-206ENST00000530535 FAM200AQ8TCP9 573 aa18.38■□□□□ 0.53
USP35-206ENST00000530535 FPGT-TNNI3KV9GXZ4 949 aa18.38■□□□□ 0.53
USP35-206ENST00000530535 CRKLP46109 303 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms