RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 PNISRQ8TF01 805 aaKnown RBP9.33□□□□□ -0.92
ITGB1-218ENST00000528877 SALL2Q9Y467 1007 aaPredicted RBP9.33□□□□□ -0.92
ITGB1-218ENST00000528877 CARMIL3Q8ND23 1372 aa9.33□□□□□ -0.92
ITGB1-218ENST00000528877 SNRPA1P09661 255 aaKnown RBP9.32□□□□□ -0.92
ITGB1-218ENST00000528877 KCNA3P22001 575 aa9.32□□□□□ -0.92
ITGB1-218ENST00000528877 NFIXQ14938 502 aa9.32□□□□□ -0.92
ITGB1-218ENST00000528877 TAF7Q15545 349 aaPredicted RBP9.32□□□□□ -0.92
ITGB1-218ENST00000528877 Q3C1V9 767 aa9.32□□□□□ -0.92
ITGB1-218ENST00000528877 PPP1R18Q6NYC8 613 aa9.32□□□□□ -0.92
ITGB1-218ENST00000528877 TRAF7Q6Q0C0 670 aa9.32□□□□□ -0.92
ITGB1-218ENST00000528877 PRKRIP1Q9H875 184 aaPredicted RBP9.32□□□□□ -0.92
ITGB1-218ENST00000528877 ATP10DQ9P241 1426 aa9.31□□□□□ -0.92
ITGB1-218ENST00000528877 TRIM66O15016 1216 aa9.31□□□□□ -0.92
ITGB1-218ENST00000528877 CAMTA2O94983 1202 aa9.31□□□□□ -0.92
ITGB1-218ENST00000528877 CANXP27824 592 aaKnown RBP9.31□□□□□ -0.92
ITGB1-218ENST00000528877 LMOD3Q0VAK6 560 aa9.31□□□□□ -0.92
ITGB1-218ENST00000528877 DCTN1Q14203 1278 aa9.31□□□□□ -0.92
ITGB1-218ENST00000528877 PUS10Q3MIT2 529 aaKnown RBP9.31□□□□□ -0.92
ITGB1-218ENST00000528877 BABAM1Q9NWV8 329 aa9.31□□□□□ -0.92
ITGB1-218ENST00000528877 COL11A2P13942 1736 aaPredicted RBP9.31□□□□□ -0.92
ITGB1-218ENST00000528877 ANKRD31Q8N7Z5 1873 aa9.3□□□□□ -0.92
ITGB1-218ENST00000528877 FMNL1O95466 1100 aaPredicted RBP9.3□□□□□ -0.92
ITGB1-218ENST00000528877 DPEP1P16444 411 aa9.3□□□□□ -0.92
ITGB1-218ENST00000528877 SSTR3P32745 418 aaPredicted RBP9.3□□□□□ -0.92
ITGB1-218ENST00000528877 NUTM1Q86Y26 1132 aa9.3□□□□□ -0.92
ITGB1-218ENST00000528877 NKX2-3Q8TAU0 364 aa9.3□□□□□ -0.92
ITGB1-218ENST00000528877 ERBB4Q15303 1308 aa9.3□□□□□ -0.92
ITGB1-218ENST00000528877 ARFGEF2Q9Y6D5 1785 aa9.29□□□□□ -0.92
ITGB1-218ENST00000528877 A0A0G2JLW4 131 aa9.29□□□□□ -0.92
ITGB1-218ENST00000528877 PRAMEF22A3QJZ6 481 aa9.29□□□□□ -0.92
ITGB1-218ENST00000528877 GIGYF1O75420 1035 aaPredicted RBP9.29□□□□□ -0.92
ITGB1-218ENST00000528877 A1BGP04217 495 aa9.29□□□□□ -0.92
ITGB1-218ENST00000528877 EIF4A1P60842 406 aaKnown RBP9.29□□□□□ -0.92
ITGB1-218ENST00000528877 DIXDC1Q155Q3 683 aa9.29□□□□□ -0.92
ITGB1-218ENST00000528877 CLEC4GQ6UXB4 293 aa9.29□□□□□ -0.92
ITGB1-218ENST00000528877 GIGYF2Q6Y7W6 1299 aaKnown RBP9.29□□□□□ -0.92
ITGB1-218ENST00000528877 SPSB2Q99619 263 aa9.29□□□□□ -0.92
ITGB1-218ENST00000528877 USP16Q9Y5T5 823 aa9.29□□□□□ -0.92
ITGB1-218ENST00000528877 RIC1Q4ADV7 1423 aa9.29□□□□□ -0.92
ITGB1-218ENST00000528877 CEP350Q5VT06 3117 aa9.29□□□□□ -0.92
ITGB1-218ENST00000528877 IBTKQ9P2D0 1353 aaPredicted RBP9.28□□□□□ -0.92
ITGB1-218ENST00000528877 TLL1O43897 1013 aa9.28□□□□□ -0.92
ITGB1-218ENST00000528877 SERPINB2P05120 415 aa9.28□□□□□ -0.92
ITGB1-218ENST00000528877 TMPOP42166 694 aaKnown RBP9.28□□□□□ -0.92
ITGB1-218ENST00000528877 TBC1D9BQ66K14 1250 aa9.28□□□□□ -0.92
ITGB1-218ENST00000528877 NBPF10Q6P3W6 841 aaKnown RBP9.28□□□□□ -0.92
ITGB1-218ENST00000528877 DZIP3Q86Y13 1208 aaKnown RBP9.28□□□□□ -0.92
ITGB1-218ENST00000528877 NBPF15Q8N660 670 aa9.28□□□□□ -0.92
ITGB1-218ENST00000528877 SLC6A16Q9GZN6 736 aa9.28□□□□□ -0.92
ITGB1-218ENST00000528877 PIM2Q9P1W9 311 aa9.28□□□□□ -0.92
ITGB1-218ENST00000528877 PDZRN3Q9UPQ7 1066 aa9.28□□□□□ -0.92
ITGB1-218ENST00000528877 SLC27A5Q9Y2P5 690 aa9.28□□□□□ -0.92
ITGB1-218ENST00000528877 V9GY48 417 aaPredicted RBP9.28□□□□□ -0.92
ITGB1-218ENST00000528877 RIPK4P57078 832 aa9.27□□□□□ -0.93
ITGB1-218ENST00000528877 WDR43Q15061 677 aaKnown RBP eCLIP9.27□□□□□ -0.93
ITGB1-218ENST00000528877 DALRD3Q5D0E6 543 aaKnown RBP9.27□□□□□ -0.93
ITGB1-218ENST00000528877 PRR5LQ6MZQ0 368 aa9.27□□□□□ -0.93
ITGB1-218ENST00000528877 NPM2Q86SE8 214 aaKnown RBP9.27□□□□□ -0.93
ITGB1-218ENST00000528877 RUNDC1Q96C34 613 aa9.27□□□□□ -0.93
ITGB1-218ENST00000528877 THUMPD2Q9BTF0 503 aaKnown RBP9.27□□□□□ -0.93
ITGB1-218ENST00000528877 TBC1D2BQ9UPU7 963 aa9.27□□□□□ -0.93
ITGB1-218ENST00000528877 BCS1LQ9Y276 419 aa9.27□□□□□ -0.93
ITGB1-218ENST00000528877 ZNF652Q9Y2D9 606 aa9.27□□□□□ -0.93
ITGB1-218ENST00000528877 HOXA2O43364 376 aa9.26□□□□□ -0.93
ITGB1-218ENST00000528877 CHRNA5P30532 468 aa9.26□□□□□ -0.93
ITGB1-218ENST00000528877 PARP9Q8IXQ6 854 aa9.26□□□□□ -0.93
ITGB1-218ENST00000528877 ANKLE1Q8NAG6 615 aa9.26□□□□□ -0.93
ITGB1-218ENST00000528877 BRIP1Q9BX63 1249 aa9.26□□□□□ -0.93
ITGB1-218ENST00000528877 ZC3H4Q9UPT8 1303 aaKnown RBP9.26□□□□□ -0.93
ITGB1-218ENST00000528877 KLRG2A4D1S0 409 aaPredicted RBP9.25□□□□□ -0.93
ITGB1-218ENST00000528877 ERVV-1B6SEH8 477 aa9.25□□□□□ -0.93
ITGB1-218ENST00000528877 PDE4DQ08499 809 aa9.25□□□□□ -0.93
ITGB1-218ENST00000528877 LRP10Q7Z4F1 713 aa9.25□□□□□ -0.93
ITGB1-218ENST00000528877 CNBD1Q8NA66 436 aa9.25□□□□□ -0.93
ITGB1-218ENST00000528877 THAP11Q96EK4 314 aa9.25□□□□□ -0.93
ITGB1-218ENST00000528877 SETDB2Q96T68 719 aa9.25□□□□□ -0.93
ITGB1-218ENST00000528877 REPIN1Q9BWE0 567 aaKnown RBP9.25□□□□□ -0.93
ITGB1-218ENST00000528877 SLC24A3Q9HC58 644 aa9.25□□□□□ -0.93
ITGB1-218ENST00000528877 MIS18AQ9NYP9 233 aa9.25□□□□□ -0.93
ITGB1-218ENST00000528877 TSPYL4Q9UJ04 414 aa9.25□□□□□ -0.93
ITGB1-218ENST00000528877 ADAMTS8Q9UP79 889 aa9.25□□□□□ -0.93
ITGB1-218ENST00000528877 ZNF330Q9Y3S2 320 aaPredicted RBP9.25□□□□□ -0.93
ITGB1-218ENST00000528877 TNRC6CQ9HCJ0 1690 aaKnown RBP9.25□□□□□ -0.93
ITGB1-218ENST00000528877 TIAM2Q8IVF5 1701 aa9.25□□□□□ -0.93
ITGB1-218ENST00000528877 CHL1O00533 1208 aa9.24□□□□□ -0.93
ITGB1-218ENST00000528877 S1PR4O95977 384 aa9.24□□□□□ -0.93
ITGB1-218ENST00000528877 HOXB7P09629 217 aa9.24□□□□□ -0.93
ITGB1-218ENST00000528877 PDE6BP35913 854 aa9.24□□□□□ -0.93
ITGB1-218ENST00000528877 PIP4K2AP48426 406 aaPredicted RBP9.24□□□□□ -0.93
ITGB1-218ENST00000528877 MSS51Q4VC12 460 aa9.24□□□□□ -0.93
ITGB1-218ENST00000528877 BRICD5Q6PL45 260 aa9.24□□□□□ -0.93
ITGB1-218ENST00000528877 WWC3Q9ULE0 1092 aa9.24□□□□□ -0.93
ITGB1-218ENST00000528877 MAP3K15Q6ZN16 1313 aa9.24□□□□□ -0.93
ITGB1-218ENST00000528877 ANKRD36CQ5JPF3 1778 aa9.24□□□□□ -0.93
ITGB1-218ENST00000528877 NUP98P52948 1817 aa9.24□□□□□ -0.93
ITGB1-218ENST00000528877 RNF223E7ERA6 249 aa9.23□□□□□ -0.93
ITGB1-218ENST00000528877 H0YIN7 160 aa9.23□□□□□ -0.93
ITGB1-218ENST00000528877 ST5P78524 1137 aa9.23□□□□□ -0.93
ITGB1-218ENST00000528877 BICDL1Q6ZP65 573 aa9.23□□□□□ -0.93
ITGB1-218ENST00000528877 C2CD5Q86YS7 1000 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms