RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 UBE3BQ7Z3V4 1068 aa29.47■■■□□ 2.31
PKP3-206ENST00000528036 BSDC1Q9NW68 430 aaPredicted RBP29.47■■■□□ 2.31
PKP3-206ENST00000528036 YDJCA8MPS7 323 aa29.46■■■□□ 2.31
PKP3-206ENST00000528036 UFL1O94874 794 aa29.46■■■□□ 2.31
PKP3-206ENST00000528036 ATP2B4P23634 1241 aa29.46■■■□□ 2.31
PKP3-206ENST00000528036 RIMBP2O15034 1052 aa29.45■■■□□ 2.31
PKP3-206ENST00000528036 DBNDD1Q9H9R9 158 aa29.45■■■□□ 2.31
PKP3-206ENST00000528036 SPINK5Q9NQ38 1064 aaPredicted RBP29.45■■■□□ 2.31
PKP3-206ENST00000528036 ZNF521Q96K83 1311 aa29.45■■■□□ 2.3
PKP3-206ENST00000528036 TAF1P21675 1872 aa29.44■■■□□ 2.3
PKP3-206ENST00000528036 ECE2O60344 883 aa29.44■■■□□ 2.3
PKP3-206ENST00000528036 CCDC85AQ96PX6 553 aaPredicted RBP29.44■■■□□ 2.3
PKP3-206ENST00000528036 CNOT7Q9UIV1 285 aaKnown RBP29.44■■■□□ 2.3
PKP3-206ENST00000528036 CNTNAP1P78357 1384 aa29.43■■■□□ 2.3
PKP3-206ENST00000528036 IGHMBP2P38935 993 aaKnown RBP29.43■■■□□ 2.3
PKP3-206ENST00000528036 PGAP2Q9UHJ9 254 aa29.43■■■□□ 2.3
PKP3-206ENST00000528036 GREM2Q9H772 168 aa29.42■■■□□ 2.3
PKP3-206ENST00000528036 E9PSI1 815 aa29.41■■■□□ 2.3
PKP3-206ENST00000528036 PSMD14O00487 310 aa29.41■■■□□ 2.3
PKP3-206ENST00000528036 LTBP1Q14766 1721 aa29.41■■■□□ 2.3
PKP3-206ENST00000528036 CSF1RP07333 972 aa29.4■■■□□ 2.3
PKP3-206ENST00000528036 CASP7P55210 303 aa29.4■■■□□ 2.3
PKP3-206ENST00000528036 DOK7Q18PE1 504 aa29.4■■■□□ 2.3
PKP3-206ENST00000528036 MKRN1Q9UHC7 482 aaKnown RBP29.4■■■□□ 2.3
PKP3-206ENST00000528036 PODNQ7Z5L7 613 aa29.39■■■□□ 2.3
PKP3-206ENST00000528036 MINPP1Q9UNW1 487 aa29.39■■■□□ 2.3
PKP3-206ENST00000528036 VIL1P09327 827 aaKnown RBP29.38■■■□□ 2.29
PKP3-206ENST00000528036 BEND3Q5T5X7 828 aa29.38■■■□□ 2.29
PKP3-206ENST00000528036 MICALL2Q8IY33 904 aa29.38■■■□□ 2.29
PKP3-206ENST00000528036 MPHOSPH8Q99549 860 aa29.38■■■□□ 2.29
PKP3-206ENST00000528036 ANKRD2Q9GZV1 360 aa29.38■■■□□ 2.29
PKP3-206ENST00000528036 LEMD3Q9Y2U8 911 aa29.38■■■□□ 2.29
PKP3-206ENST00000528036 RASSF10A6NK89 507 aa29.37■■■□□ 2.29
PKP3-206ENST00000528036 ALDH1L1O75891 902 aa29.37■■■□□ 2.29
PKP3-206ENST00000528036 ITGA6P23229 1130 aa29.37■■■□□ 2.29
PKP3-206ENST00000528036 DEFB115Q30KQ5 88 aa29.37■■■□□ 2.29
PKP3-206ENST00000528036 CCER2I3L3R5 266 aa29.36■■■□□ 2.29
PKP3-206ENST00000528036 CDC37L1Q7L3B6 337 aa29.36■■■□□ 2.29
PKP3-206ENST00000528036 AGBL3Q8NEM8 1001 aa29.35■■■□□ 2.29
PKP3-206ENST00000528036 ABT1Q9ULW3 272 aaKnown RBP29.35■■■□□ 2.29
PKP3-206ENST00000528036 ZBTB12Q9Y330 459 aaPredicted RBP29.35■■■□□ 2.29
PKP3-206ENST00000528036 COL4A1P02462 1669 aa29.34■■■□□ 2.29
PKP3-206ENST00000528036 ANKRD18BA2A2Z9 1011 aa29.34■■■□□ 2.29
PKP3-206ENST00000528036 F6X3S4 739 aa29.34■■■□□ 2.29
PKP3-206ENST00000528036 CCT4P50991 539 aaKnown RBP29.34■■■□□ 2.29
PKP3-206ENST00000528036 IFFO2Q5TF58 517 aa29.34■■■□□ 2.29
PKP3-206ENST00000528036 MED23Q9ULK4 1368 aa29.34■■■□□ 2.29
PKP3-206ENST00000528036 HSPA1AP0DMV8 641 aaKnown RBP29.33■■■□□ 2.29
PKP3-206ENST00000528036 HSPA1BP0DMV9 641 aaKnown RBP29.33■■■□□ 2.29
PKP3-206ENST00000528036 GPR101Q96P66 508 aaPredicted RBP29.33■■■□□ 2.29
PKP3-206ENST00000528036 ZNF609O15014 1411 aa29.33■■■□□ 2.29
PKP3-206ENST00000528036 GRM8O00222 908 aa29.32■■■□□ 2.28
PKP3-206ENST00000528036 IFIT5Q13325 482 aaKnown RBP29.32■■■□□ 2.28
PKP3-206ENST00000528036 FAM161AQ3B820 660 aa29.32■■■□□ 2.28
PKP3-206ENST00000528036 SRCIN1Q9C0H9 1055 aa29.32■■■□□ 2.28
PKP3-206ENST00000528036 C9orf78Q9NZ63 289 aaPredicted RBP29.32■■■□□ 2.28
PKP3-206ENST00000528036 MYH3P11055 1940 aa29.32■■■□□ 2.28
PKP3-206ENST00000528036 ECE1P42892 770 aa29.31■■■□□ 2.28
PKP3-206ENST00000528036 VEGFBP49765 207 aa29.31■■■□□ 2.28
PKP3-206ENST00000528036 MMP14P50281 582 aa29.31■■■□□ 2.28
PKP3-206ENST00000528036 HIRAP54198 1017 aaPredicted RBP29.31■■■□□ 2.28
PKP3-206ENST00000528036 RSBN1LQ6PCB5 846 aaPredicted RBP29.31■■■□□ 2.28
PKP3-206ENST00000528036 TRPM4Q8TD43 1214 aa29.31■■■□□ 2.28
PKP3-206ENST00000528036 USP17L3A6NCW0 530 aa29.3■■■□□ 2.28
PKP3-206ENST00000528036 USP17L4A6NCW7 530 aa29.3■■■□□ 2.28
PKP3-206ENST00000528036 USP17L1Q7RTZ2 530 aa29.3■■■□□ 2.28
PKP3-206ENST00000528036 COA1Q9GZY4 146 aa29.3■■■□□ 2.28
PKP3-206ENST00000528036 PTPRCP08575 1304 aa29.29■■■□□ 2.28
PKP3-206ENST00000528036 KCNQ5Q9NR82 932 aa29.29■■■□□ 2.28
PKP3-206ENST00000528036 SLFN5Q08AF3 891 aa29.28■■■□□ 2.28
PKP3-206ENST00000528036 SLC4A10Q6U841 1118 aa29.28■■■□□ 2.28
PKP3-206ENST00000528036 ZNF804BA4D1E1 1349 aa29.27■■■□□ 2.28
PKP3-206ENST00000528036 TRAF5O00463 557 aa29.27■■■□□ 2.28
PKP3-206ENST00000528036 FOXO4P98177 505 aa29.27■■■□□ 2.28
PKP3-206ENST00000528036 CCDC57Q2TAC2 916 aa29.27■■■□□ 2.28
PKP3-206ENST00000528036 CST9Q5W186 159 aa29.27■■■□□ 2.28
PKP3-206ENST00000528036 SAMD7Q7Z3H4 446 aa29.27■■■□□ 2.28
PKP3-206ENST00000528036 DCPSQ96C86 337 aaKnown RBP29.27■■■□□ 2.28
PKP3-206ENST00000528036 HHIPL1Q96JK4 782 aa29.27■■■□□ 2.28
PKP3-206ENST00000528036 GLIS2Q9BZE0 524 aaPredicted RBP29.27■■■□□ 2.28
PKP3-206ENST00000528036 TLL2Q9Y6L7 1015 aa29.27■■■□□ 2.28
PKP3-206ENST00000528036 MYO3BQ8WXR4 1341 aa29.26■■■□□ 2.27
PKP3-206ENST00000528036 CELF2O95319 508 aaKnown RBP29.26■■■□□ 2.27
PKP3-206ENST00000528036 CT47B1P0C2W7 299 aaPredicted RBP29.26■■■□□ 2.27
PKP3-206ENST00000528036 KCNJ4P48050 445 aa29.26■■■□□ 2.27
PKP3-206ENST00000528036 ZNF280AP59817 542 aaPredicted RBP29.26■■■□□ 2.27
PKP3-206ENST00000528036 TBC1D10BQ4KMP7 808 aaPredicted RBP29.26■■■□□ 2.27
PKP3-206ENST00000528036 AIDAQ96BJ3 306 aa29.26■■■□□ 2.27
PKP3-206ENST00000528036 MAP2K1Q02750 393 aaPredicted RBP29.25■■■□□ 2.27
PKP3-206ENST00000528036 KIF4BQ2VIQ3 1234 aa29.25■■■□□ 2.27
PKP3-206ENST00000528036 MRPL50Q8N5N7 158 aaKnown RBP29.25■■■□□ 2.27
PKP3-206ENST00000528036 CHMP3Q9Y3E7 222 aa29.25■■■□□ 2.27
PKP3-206ENST00000528036 WDR33Q9C0J8 1336 aaKnown RBP29.24■■■□□ 2.27
PKP3-206ENST00000528036 SHTN1A0MZ66 631 aa29.24■■■□□ 2.27
PKP3-206ENST00000528036 USP17L8P0C7I0 530 aa29.24■■■□□ 2.27
PKP3-206ENST00000528036 ALDH1L2Q3SY69 923 aa29.24■■■□□ 2.27
PKP3-206ENST00000528036 TAF7LQ5H9L4 462 aa29.24■■■□□ 2.27
PKP3-206ENST00000528036 STRIP1Q5VSL9 837 aa29.24■■■□□ 2.27
PKP3-206ENST00000528036 LMBR1LQ6UX01 489 aa29.24■■■□□ 2.27
PKP3-206ENST00000528036 CHRNDQ07001 517 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 428.2 ms