RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 PRR20BP86481 221 aa5.65□□□□□ -1.5
CHD7-205ENST00000527825 PRR20AP86496 221 aa5.65□□□□□ -1.5
CHD7-205ENST00000527825 ITPK1Q13572 414 aa5.65□□□□□ -1.5
CHD7-205ENST00000527825 MAP1SQ66K74 1059 aaPredicted RBP5.65□□□□□ -1.5
CHD7-205ENST00000527825 PNMA8AQ86V59 439 aaPredicted RBP5.65□□□□□ -1.5
CHD7-205ENST00000527825 USHBP1Q8N6Y0 703 aa5.65□□□□□ -1.5
CHD7-205ENST00000527825 ADAMTS7Q9UKP4 1686 aa5.65□□□□□ -1.51
CHD7-205ENST00000527825 H0YIN7 160 aa5.64□□□□□ -1.51
CHD7-205ENST00000527825 TNFRSF10AO00220 468 aa5.64□□□□□ -1.51
CHD7-205ENST00000527825 RPS6KA4O75676 772 aa5.64□□□□□ -1.51
CHD7-205ENST00000527825 HOXC9P31274 260 aa5.64□□□□□ -1.51
CHD7-205ENST00000527825 EPHX2P34913 555 aa5.64□□□□□ -1.51
CHD7-205ENST00000527825 BRPF1P55201 1214 aaPredicted RBP5.64□□□□□ -1.51
CHD7-205ENST00000527825 HDGFL2Q7Z4V5 671 aaPredicted RBP5.64□□□□□ -1.51
CHD7-205ENST00000527825 C2CD5Q86YS7 1000 aa5.64□□□□□ -1.51
CHD7-205ENST00000527825 FAM160A2Q8N612 972 aaPredicted RBP5.64□□□□□ -1.51
CHD7-205ENST00000527825 ZNF622Q969S3 477 aaKnown RBP eCLIP5.64□□□□□ -1.516e-7■■■□□ 15.1
CHD7-205ENST00000527825 TAOK3Q9H2K8 898 aa5.64□□□□□ -1.51
CHD7-205ENST00000527825 PRDM9Q9NQV7 894 aa5.64□□□□□ -1.51
CHD7-205ENST00000527825 DDX21Q9NR30 783 aaKnown RBP eCLIP5.64□□□□□ -1.51
CHD7-205ENST00000527825 ASAP1Q9ULH1 1129 aa5.64□□□□□ -1.51
CHD7-205ENST00000527825 FCF1Q9Y324 198 aaKnown RBP5.64□□□□□ -1.51
CHD7-205ENST00000527825 NRXN2Q9P2S2 1712 aa5.64□□□□□ -1.51
CHD7-205ENST00000527825 C21orf2O43822 256 aa5.63□□□□□ -1.51
CHD7-205ENST00000527825 GDF9O60383 454 aa5.63□□□□□ -1.51
CHD7-205ENST00000527825 KDM4AO75164 1064 aa5.63□□□□□ -1.51
CHD7-205ENST00000527825 DDR1Q08345 913 aa5.63□□□□□ -1.51
CHD7-205ENST00000527825 PKDCCQ504Y2 493 aa5.63□□□□□ -1.51
CHD7-205ENST00000527825 RC3H1Q5TC82 1133 aaKnown RBP5.63□□□□□ -1.51
CHD7-205ENST00000527825 RNF19BQ6ZMZ0 732 aa5.63□□□□□ -1.51
CHD7-205ENST00000527825 SRP68Q9UHB9 627 aaKnown RBP5.63□□□□□ -1.51
CHD7-205ENST00000527825 CNTNAP4Q9C0A0 1308 aa5.63□□□□□ -1.51
CHD7-205ENST00000527825 COL11A2P13942 1736 aaPredicted RBP5.62□□□□□ -1.51
CHD7-205ENST00000527825 ANKRD31Q8N7Z5 1873 aa5.62□□□□□ -1.51
CHD7-205ENST00000527825 POLRMTO00411 1230 aaKnown RBP5.62□□□□□ -1.51
CHD7-205ENST00000527825 CYP27B1O15528 508 aa5.62□□□□□ -1.51
CHD7-205ENST00000527825 FXR1P51114 621 aaKnown RBP eCLIP5.62□□□□□ -1.51
CHD7-205ENST00000527825 GRIPAP1Q4V328 841 aa5.62□□□□□ -1.51
CHD7-205ENST00000527825 NBPF6Q5VWK0 638 aa5.62□□□□□ -1.51
CHD7-205ENST00000527825 CIAPIN1Q6FI81 312 aa5.62□□□□□ -1.51
CHD7-205ENST00000527825 BRICD5Q6PL45 260 aa5.62□□□□□ -1.51
CHD7-205ENST00000527825 BICDL1Q6ZP65 573 aa5.62□□□□□ -1.51
CHD7-205ENST00000527825 TMC1Q8TDI8 760 aa5.62□□□□□ -1.51
CHD7-205ENST00000527825 NBPF4Q96M43 638 aa5.62□□□□□ -1.51
CHD7-205ENST00000527825 SPG7Q9UQ90 795 aa5.62□□□□□ -1.51
CHD7-205ENST00000527825 SALL2Q9Y467 1007 aaPredicted RBP5.62□□□□□ -1.51
CHD7-205ENST00000527825 SUPT16HQ9Y5B9 1047 aaKnown RBP5.62□□□□□ -1.51
CHD7-205ENST00000527825 TLL2Q9Y6L7 1015 aa5.62□□□□□ -1.51
CHD7-205ENST00000527825 MAP3K19Q56UN5 1328 aa5.62□□□□□ -1.51
CHD7-205ENST00000527825 USP42Q9H9J4 1324 aaKnown RBP5.62□□□□□ -1.51
CHD7-205ENST00000527825 SCN11AQ9UI33 1791 aa5.62□□□□□ -1.51
CHD7-205ENST00000527825 SLX4Q8IY92 1834 aa5.62□□□□□ -1.51
CHD7-205ENST00000527825 FAM187AA6NFU0 413 aa5.61□□□□□ -1.51
CHD7-205ENST00000527825 RTL1A6NKG5 1358 aa5.61□□□□□ -1.51
CHD7-205ENST00000527825 DGAT1O75907 488 aa5.61□□□□□ -1.51
CHD7-205ENST00000527825 MS4A1P11836 297 aa5.61□□□□□ -1.51
CHD7-205ENST00000527825 LMOD1P29536 600 aaPredicted RBP5.61□□□□□ -1.51
CHD7-205ENST00000527825 MSS51Q4VC12 460 aa5.61□□□□□ -1.51
CHD7-205ENST00000527825 SOGA3Q5TF21 947 aa5.61□□□□□ -1.51
CHD7-205ENST00000527825 RNF123Q5XPI4 1314 aa5.61□□□□□ -1.51
CHD7-205ENST00000527825 ZNF787Q6DD87 383 aa5.61□□□□□ -1.51
CHD7-205ENST00000527825 EDC4Q6P2E9 1401 aaKnown RBP5.61□□□□□ -1.51
CHD7-205ENST00000527825 NUTM1Q86Y26 1132 aa5.61□□□□□ -1.51
CHD7-205ENST00000527825 COG3Q96JB2 828 aa5.61□□□□□ -1.51
CHD7-205ENST00000527825 LTBP3Q9NS15 1303 aa5.61□□□□□ -1.51
CHD7-205ENST00000527825 ATG3Q9NT62 314 aa5.61□□□□□ -1.51
CHD7-205ENST00000527825 PKD2L1Q9P0L9 805 aa5.61□□□□□ -1.51
CHD7-205ENST00000527825 NPHP1O15259 732 aa5.6□□□□□ -1.51
CHD7-205ENST00000527825 SERPINB2P05120 415 aa5.6□□□□□ -1.51
CHD7-205ENST00000527825 TM4SF1P30408 202 aa5.6□□□□□ -1.51
CHD7-205ENST00000527825 RPIAP49247 311 aa5.6□□□□□ -1.51
CHD7-205ENST00000527825 USP46P62068 366 aa5.6□□□□□ -1.51
CHD7-205ENST00000527825 FOXC1Q12948 553 aa5.6□□□□□ -1.51
CHD7-205ENST00000527825 AKAP4Q5JQC9 854 aa5.6□□□□□ -1.51
CHD7-205ENST00000527825 USPL1Q5W0Q7 1092 aa5.6□□□□□ -1.51
CHD7-205ENST00000527825 CTU1Q7Z7A3 348 aaKnown RBP5.6□□□□□ -1.51
CHD7-205ENST00000527825 TERF2IPQ9NYB0 399 aa5.6□□□□□ -1.51
CHD7-205ENST00000527825 TJP1Q07157 1748 aa5.6□□□□□ -1.51
CHD7-205ENST00000527825 ANKRD26Q9UPS8 1709 aa5.6□□□□□ -1.51
CHD7-205ENST00000527825 KDRP35968 1356 aa5.59□□□□□ -1.51
CHD7-205ENST00000527825 SBNO2Q9Y2G9 1366 aa5.59□□□□□ -1.51
CHD7-205ENST00000527825 PITPNM2Q9BZ72 1349 aa5.59□□□□□ -1.51
CHD7-205ENST00000527825 HOXA2O43364 376 aa5.59□□□□□ -1.51
CHD7-205ENST00000527825 PDE6BP35913 854 aa5.59□□□□□ -1.51
CHD7-205ENST00000527825 CRKLP46109 303 aaKnown RBP5.59□□□□□ -1.51
CHD7-205ENST00000527825 NOGQ13253 232 aa5.59□□□□□ -1.51
CHD7-205ENST00000527825 Q3C1V9 767 aa5.59□□□□□ -1.51
CHD7-205ENST00000527825 SPIRE2Q8WWL2 714 aa5.59□□□□□ -1.51
CHD7-205ENST00000527825 HLA-CQ95604 372 aa5.59□□□□□ -1.51
CHD7-205ENST00000527825 ZNF408Q9H9D4 720 aa5.59□□□□□ -1.51
CHD7-205ENST00000527825 HDAC9Q9UKV0 1011 aa5.59□□□□□ -1.51
CHD7-205ENST00000527825 BCORQ6W2J9 1755 aa5.59□□□□□ -1.51
CHD7-205ENST00000527825 PAPPA2Q9BXP8 1791 aa5.59□□□□□ -1.51
CHD7-205ENST00000527825 KIF20BQ96Q89 1820 aa5.58□□□□□ -1.52
CHD7-205ENST00000527825 RBBP6Q7Z6E9 1792 aaKnown RBP5.58□□□□□ -1.52
CHD7-205ENST00000527825 ZNF541Q9H0D2 1346 aa5.58□□□□□ -1.52
CHD7-205ENST00000527825 TRAF5O00463 557 aa5.58□□□□□ -1.52
CHD7-205ENST00000527825 CELF2O95319 508 aaKnown RBP5.58□□□□□ -1.52
CHD7-205ENST00000527825 FMR1Q06787 632 aaKnown RBP eCLIP5.58□□□□□ -1.52
CHD7-205ENST00000527825 PKN2Q16513 984 aaKnown RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms