RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 NOGQ13253 232 aa26.92■■□□□ 1.9
PKP3-205ENST00000527442 SAMD7Q7Z3H4 446 aa26.92■■□□□ 1.9
PKP3-205ENST00000527442 DBNDD1Q9H9R9 158 aa26.92■■□□□ 1.9
PKP3-205ENST00000527442 PSMD14O00487 310 aa26.91■■□□□ 1.9
PKP3-205ENST00000527442 EGFRP00533 1210 aa26.91■■□□□ 1.9
PKP3-205ENST00000527442 CELF1Q92879 486 aaKnown RBP26.91■■□□□ 1.9
PKP3-205ENST00000527442 SCN9AQ15858 1988 aa26.91■■□□□ 1.9
PKP3-205ENST00000527442 FANCIQ9NVI1 1328 aa26.9■■□□□ 1.9
PKP3-205ENST00000527442 DGKZQ13574 1117 aa26.9■■□□□ 1.9
PKP3-205ENST00000527442 TBC1D10BQ4KMP7 808 aaPredicted RBP26.9■■□□□ 1.9
PKP3-205ENST00000527442 DPF2Q92785 391 aa26.9■■□□□ 1.9
PKP3-205ENST00000527442 CHPF2Q9P2E5 772 aa26.9■■□□□ 1.9
PKP3-205ENST00000527442 WASHC4Q2M389 1173 aa26.89■■□□□ 1.9
PKP3-205ENST00000527442 NSFL1CQ9UNZ2 370 aaKnown RBP26.89■■□□□ 1.9
PKP3-205ENST00000527442 CHL1O00533 1208 aa26.88■■□□□ 1.89
PKP3-205ENST00000527442 RIMBP2O15034 1052 aa26.88■■□□□ 1.89
PKP3-205ENST00000527442 RTL9Q8NET4 1388 aa26.87■■□□□ 1.89
PKP3-205ENST00000527442 FAM89AQ96GI7 184 aa26.87■■□□□ 1.89
PKP3-205ENST00000527442 ISCA1Q9BUE6 129 aa26.87■■□□□ 1.89
PKP3-205ENST00000527442 POLLQ9UGP5 575 aa26.87■■□□□ 1.89
PKP3-205ENST00000527442 FAM155AB1AL88 458 aaPredicted RBP26.86■■□□□ 1.89
PKP3-205ENST00000527442 ADM5C9JUS6 153 aa26.86■■□□□ 1.89
PKP3-205ENST00000527442 C6orf229H3BNL8 230 aa26.86■■□□□ 1.89
PKP3-205ENST00000527442 GPSM2P81274 684 aa26.86■■□□□ 1.89
PKP3-205ENST00000527442 SF3B3Q15393 1217 aaKnown RBP26.86■■□□□ 1.89
PKP3-205ENST00000527442 KRT26Q7Z3Y9 468 aa26.86■■□□□ 1.89
PKP3-205ENST00000527442 PLBD2Q8NHP8 589 aa26.86■■□□□ 1.89
PKP3-205ENST00000527442 KCNQ5Q9NR82 932 aa26.86■■□□□ 1.89
PKP3-205ENST00000527442 MBIPQ9NS73 344 aa26.86■■□□□ 1.89
PKP3-205ENST00000527442 TNRC18O15417 2968 aaPredicted RBP26.86■■□□□ 1.89
PKP3-205ENST00000527442 AKAP11Q9UKA4 1901 aa26.86■■□□□ 1.89
PKP3-205ENST00000527442 ATP5J2-PTCD1G3V325 749 aa26.85■■□□□ 1.89
PKP3-205ENST00000527442 ECE2O60344 883 aa26.85■■□□□ 1.89
PKP3-205ENST00000527442 RGMBQ6NW40 437 aa26.85■■□□□ 1.89
PKP3-205ENST00000527442 TSR2Q969E8 191 aaKnown RBP26.85■■□□□ 1.89
PKP3-205ENST00000527442 GBA2Q9HCG7 927 aaPredicted RBP26.85■■□□□ 1.89
PKP3-205ENST00000527442 PSME4Q14997 1843 aa26.84■■□□□ 1.89
PKP3-205ENST00000527442 DOK7Q18PE1 504 aa26.84■■□□□ 1.89
PKP3-205ENST00000527442 HDGFL1Q5TGJ6 251 aa26.84■■□□□ 1.89
PKP3-205ENST00000527442 RPS12P25398 132 aaKnown RBP26.83■■□□□ 1.89
PKP3-205ENST00000527442 RTL5Q5HYW3 569 aaPredicted RBP26.83■■□□□ 1.89
PKP3-205ENST00000527442 RBM26Q5T8P6 1007 aaKnown RBP26.83■■□□□ 1.89
PKP3-205ENST00000527442 ANKRD13DQ6ZTN6 518 aa26.83■■□□□ 1.89
PKP3-205ENST00000527442 LAS1LQ9Y4W2 734 aaKnown RBP26.83■■□□□ 1.89
PKP3-205ENST00000527442 C2orf69Q8N8R5 385 aa26.81■■□□□ 1.88
PKP3-205ENST00000527442 DCPSQ96C86 337 aaKnown RBP26.81■■□□□ 1.88
PKP3-205ENST00000527442 KIF23Q02241 960 aaPredicted RBP26.8■■□□□ 1.88
PKP3-205ENST00000527442 KIF4BQ2VIQ3 1234 aa26.8■■□□□ 1.88
PKP3-205ENST00000527442 TBC1D16Q8TBP0 767 aa26.8■■□□□ 1.88
PKP3-205ENST00000527442 EYA3Q99504 573 aa26.8■■□□□ 1.88
PKP3-205ENST00000527442 GGA3Q9NZ52 723 aa26.79■■□□□ 1.88
PKP3-205ENST00000527442 DBF4Q9UBU7 674 aaPredicted RBP26.79■■□□□ 1.88
PKP3-205ENST00000527442 ASTN2O75129 1339 aaPredicted RBP26.79■■□□□ 1.88
PKP3-205ENST00000527442 IRS4O14654 1257 aaPredicted RBP26.78■■□□□ 1.88
PKP3-205ENST00000527442 HOXB7P09629 217 aa26.78■■□□□ 1.88
PKP3-205ENST00000527442 ZNF157P51786 506 aaPredicted RBP26.78■■□□□ 1.88
PKP3-205ENST00000527442 CCDC102AQ96A19 550 aa26.78■■□□□ 1.88
PKP3-205ENST00000527442 SAGE1Q9NXZ1 904 aa26.78■■□□□ 1.88
PKP3-205ENST00000527442 CT47B1P0C2W7 299 aaPredicted RBP26.77■■□□□ 1.88
PKP3-205ENST00000527442 RPS8P62241 208 aaKnown RBP26.77■■□□□ 1.88
PKP3-205ENST00000527442 EXOSC9Q06265 439 aaKnown RBP26.76■■□□□ 1.87
PKP3-205ENST00000527442 SLC10A3P09131 477 aa26.75■■□□□ 1.87
PKP3-205ENST00000527442 VIL1P09327 827 aaKnown RBP26.75■■□□□ 1.87
PKP3-205ENST00000527442 TRIM28Q13263 835 aaKnown RBP26.75■■□□□ 1.87
PKP3-205ENST00000527442 SULF1Q8IWU6 871 aa26.75■■□□□ 1.87
PKP3-205ENST00000527442 CDCA5Q96FF9 252 aa26.75■■□□□ 1.87
PKP3-205ENST00000527442 SEC31BQ9NQW1 1179 aa26.75■■□□□ 1.87
PKP3-205ENST00000527442 RNF186Q9NXI6 227 aa26.75■■□□□ 1.87
PKP3-205ENST00000527442 ZNF609O15014 1411 aa26.74■■□□□ 1.87
PKP3-205ENST00000527442 TRPA1O75762 1119 aa26.74■■□□□ 1.87
PKP3-205ENST00000527442 ZC3H12CQ9C0D7 883 aaKnown RBP26.74■■□□□ 1.87
PKP3-205ENST00000527442 HYPKQ9NX55 129 aa26.74■■□□□ 1.87
PKP3-205ENST00000527442 PODXL2Q9NZ53 605 aa26.74■■□□□ 1.87
PKP3-205ENST00000527442 PAPPA2Q9BXP8 1791 aa26.74■■□□□ 1.87
PKP3-205ENST00000527442 UFL1O94874 794 aa26.73■■□□□ 1.87
PKP3-205ENST00000527442 PDE4DIPQ5VU43 2346 aa26.73■■□□□ 1.87
PKP3-205ENST00000527442 ZNF646O15015 1829 aaPredicted RBP26.72■■□□□ 1.87
PKP3-205ENST00000527442 SPEF2Q9C093 1822 aa26.72■■□□□ 1.87
PKP3-205ENST00000527442 CSRNP1Q96S65 589 aa26.71■■□□□ 1.87
PKP3-205ENST00000527442 SOX10P56693 466 aa26.7■■□□□ 1.86
PKP3-205ENST00000527442 ZNF280AP59817 542 aaPredicted RBP26.7■■□□□ 1.86
PKP3-205ENST00000527442 ANGEL2Q5VTE6 544 aaKnown RBP26.7■■□□□ 1.86
PKP3-205ENST00000527442 ZBTB38Q8NAP3 1195 aaPredicted RBP26.7■■□□□ 1.86
PKP3-205ENST00000527442 ANKIB1Q9P2G1 1089 aa26.7■■□□□ 1.86
PKP3-205ENST00000527442 GGA1Q9UJY5 639 aa26.7■■□□□ 1.86
PKP3-205ENST00000527442 G3V3G9 751 aa26.69■■□□□ 1.86
PKP3-205ENST00000527442 DCAF8Q5TAQ9 597 aa26.69■■□□□ 1.86
PKP3-205ENST00000527442 RSBN1LQ6PCB5 846 aaPredicted RBP26.69■■□□□ 1.86
PKP3-205ENST00000527442 RIC3Q7Z5B4 369 aa26.69■■□□□ 1.86
PKP3-205ENST00000527442 RASAL3Q86YV0 1011 aa26.69■■□□□ 1.86
PKP3-205ENST00000527442 C8orf58Q8NAV2 365 aa26.69■■□□□ 1.86
PKP3-205ENST00000527442 SCARF1Q14162 830 aa26.68■■□□□ 1.86
PKP3-205ENST00000527442 TWISTNBQ3B726 338 aaPredicted RBP26.68■■□□□ 1.86
PKP3-205ENST00000527442 PHAXQ9H814 394 aaKnown RBP26.68■■□□□ 1.86
PKP3-205ENST00000527442 RCAN3Q9UKA8 241 aa26.68■■□□□ 1.86
PKP3-205ENST00000527442 TSPYL6Q8N831 410 aa26.67■■□□□ 1.86
PKP3-205ENST00000527442 AGBL3Q8NEM8 1001 aa26.67■■□□□ 1.86
PKP3-205ENST00000527442 MYD88Q99836 296 aa26.67■■□□□ 1.86
PKP3-205ENST00000527442 CCDC85AQ96PX6 553 aaPredicted RBP26.66■■□□□ 1.86
PKP3-205ENST00000527442 MYH3P11055 1940 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms