RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 PHF20L1A8MW92 1017 aa7.81□□□□□ -1.16
CD44-215ENST00000525241 J3QW42 95 aa7.81□□□□□ -1.16
CD44-215ENST00000525241 EREGO14944 169 aa7.81□□□□□ -1.16
CD44-215ENST00000525241 KIF4AO95239 1232 aa7.81□□□□□ -1.16
CD44-215ENST00000525241 CES1P23141 567 aa7.81□□□□□ -1.16
CD44-215ENST00000525241 HFE2Q6ZVN8 426 aa7.81□□□□□ -1.16
CD44-215ENST00000525241 CHSY3Q70JA7 882 aa7.81□□□□□ -1.16
CD44-215ENST00000525241 PMEPA1Q969W9 287 aa7.81□□□□□ -1.16
CD44-215ENST00000525241 KANSL3Q9P2N6 904 aa7.81□□□□□ -1.16
CD44-215ENST00000525241 SALL4Q9UJQ4 1053 aa7.81□□□□□ -1.16
CD44-215ENST00000525241 ANKRD33BA6NCL7 494 aa7.8□□□□□ -1.16
CD44-215ENST00000525241 NEFLP07196 543 aa7.8□□□□□ -1.16
CD44-215ENST00000525241 CPB1P15086 417 aa7.8□□□□□ -1.16
CD44-215ENST00000525241 HOXB4P17483 251 aaPredicted RBP7.8□□□□□ -1.16
CD44-215ENST00000525241 PLCB3Q01970 1234 aa7.8□□□□□ -1.16
CD44-215ENST00000525241 HYAL2Q12891 473 aa7.8□□□□□ -1.16
CD44-215ENST00000525241 C20orf204Q6ZNR8 217 aa7.8□□□□□ -1.16
CD44-215ENST00000525241 FAM35AQ86V20 835 aa7.8□□□□□ -1.16
CD44-215ENST00000525241 ENAMQ9NRM1 1142 aa7.8□□□□□ -1.16
CD44-215ENST00000525241 EIF1AYO14602 144 aaKnown RBP7.79□□□□□ -1.16
CD44-215ENST00000525241 FMR1Q06787 632 aaKnown RBP eCLIP7.79□□□□□ -1.16
CD44-215ENST00000525241 PERM1Q5SV97 790 aa7.79□□□□□ -1.16
CD44-215ENST00000525241 USPL1Q5W0Q7 1092 aa7.79□□□□□ -1.16
CD44-215ENST00000525241 CEP120Q8N960 986 aa7.79□□□□□ -1.16
CD44-215ENST00000525241 NEDD1Q8NHV4 660 aa7.79□□□□□ -1.16
CD44-215ENST00000525241 AMOTL2Q9Y2J4 779 aa7.79□□□□□ -1.16
CD44-215ENST00000525241 CPNE3O75131 537 aaKnown RBP7.78□□□□□ -1.16
CD44-215ENST00000525241 ALBP02768 609 aa7.78□□□□□ -1.16
CD44-215ENST00000525241 PSAPL1Q6NUJ1 521 aa7.78□□□□□ -1.16
CD44-215ENST00000525241 KANK3Q6NY19 840 aa7.78□□□□□ -1.16
CD44-215ENST00000525241 MICALL1Q8N3F8 863 aa7.78□□□□□ -1.16
CD44-215ENST00000525241 CSRNP1Q96S65 589 aa7.78□□□□□ -1.16
CD44-215ENST00000525241 LPIN3Q9BQK8 851 aa7.78□□□□□ -1.16
CD44-215ENST00000525241 DNAJC25Q9H1X3 360 aa7.78□□□□□ -1.16
CD44-215ENST00000525241 POLR3DP05423 398 aaPredicted RBP7.77□□□□□ -1.17
CD44-215ENST00000525241 EIF2AK2P19525 551 aaKnown RBP7.77□□□□□ -1.17
CD44-215ENST00000525241 AMPD1P23109 780 aa7.77□□□□□ -1.17
CD44-215ENST00000525241 MFAP1P55081 439 aaKnown RBP7.77□□□□□ -1.17
CD44-215ENST00000525241 NCAPG2Q86XI2 1143 aa7.77□□□□□ -1.17
CD44-215ENST00000525241 NPAS4Q8IUM7 802 aa7.77□□□□□ -1.17
CD44-215ENST00000525241 FRRS1LQ9P0K9 344 aa7.77□□□□□ -1.17
CD44-215ENST00000525241 ADAMTS8Q9UP79 889 aa7.77□□□□□ -1.17
CD44-215ENST00000525241 M0R082 166 aa7.76□□□□□ -1.17
CD44-215ENST00000525241 GHRHP01286 108 aa7.76□□□□□ -1.17
CD44-215ENST00000525241 P4HBP07237 508 aaKnown RBP7.76□□□□□ -1.17
CD44-215ENST00000525241 ACPPP15309 386 aa7.76□□□□□ -1.17
CD44-215ENST00000525241 DGKGP49619 791 aa7.76□□□□□ -1.17
CD44-215ENST00000525241 ENOX2Q16206 610 aaKnown RBP7.76□□□□□ -1.17
CD44-215ENST00000525241 ELMSAN1Q6PJG2 1045 aa7.76□□□□□ -1.17
CD44-215ENST00000525241 C8orf86Q6ZUL3 223 aa7.76□□□□□ -1.17
CD44-215ENST00000525241 GALNT12Q8IXK2 581 aa7.76□□□□□ -1.17
CD44-215ENST00000525241 ZNF417Q8TAU3 575 aa7.76□□□□□ -1.17
CD44-215ENST00000525241 NUDT8Q8WV74 236 aa7.76□□□□□ -1.17
CD44-215ENST00000525241 PLD4Q96BZ4 506 aa7.76□□□□□ -1.17
CD44-215ENST00000525241 ZNF587Q96SQ5 575 aaPredicted RBP7.76□□□□□ -1.17
CD44-215ENST00000525241 SMG9Q9H0W8 520 aaKnown RBP7.76□□□□□ -1.17
CD44-215ENST00000525241 EDN3P14138 238 aa7.75□□□□□ -1.17
CD44-215ENST00000525241 SNRPNP63162 240 aaKnown RBP7.75□□□□□ -1.17
CD44-215ENST00000525241 COL19A1Q14993 1142 aa7.75□□□□□ -1.17
CD44-215ENST00000525241 GRIK5Q16478 980 aa7.75□□□□□ -1.17
CD44-215ENST00000525241 PEAR1Q5VY43 1037 aaPredicted RBP7.75□□□□□ -1.17
CD44-215ENST00000525241 TTC9Q92623 222 aa7.75□□□□□ -1.17
CD44-215ENST00000525241 SPACA7Q96KW9 195 aa7.75□□□□□ -1.17
CD44-215ENST00000525241 PRDM6Q9NQX0 595 aa7.75□□□□□ -1.17
CD44-215ENST00000525241 LATS2Q9NRM7 1088 aa7.75□□□□□ -1.17
CD44-215ENST00000525241 PNMA6FA0A0J9YX94 578 aa7.74□□□□□ -1.17
CD44-215ENST00000525241 NFKBIEO00221 500 aa7.74□□□□□ -1.17
CD44-215ENST00000525241 RGS9O75916 674 aaPredicted RBP7.74□□□□□ -1.17
CD44-215ENST00000525241 ERCC3P19447 782 aa7.74□□□□□ -1.17
CD44-215ENST00000525241 MAPK8P45983 427 aa7.74□□□□□ -1.17
CD44-215ENST00000525241 ATP11AP98196 1134 aa7.74□□□□□ -1.17
CD44-215ENST00000525241 COL9A3Q14050 684 aaPredicted RBP7.74□□□□□ -1.17
CD44-215ENST00000525241 LINC00114Q6XXX2 140 aa7.74□□□□□ -1.17
CD44-215ENST00000525241 CCDC74AQ96AQ1 378 aa7.74□□□□□ -1.17
CD44-215ENST00000525241 RBSNQ9H1K0 784 aa7.74□□□□□ -1.17
CD44-215ENST00000525241 RASSF4Q9H2L5 321 aa7.74□□□□□ -1.17
CD44-215ENST00000525241 RRAGCQ9HB90 399 aa7.74□□□□□ -1.17
CD44-215ENST00000525241 JPH1Q9HDC5 661 aaPredicted RBP7.74□□□□□ -1.17
CD44-215ENST00000525241 DZANK1Q9NVP4 752 aa7.74□□□□□ -1.17
CD44-215ENST00000525241 LILRB5O75023 590 aa7.73□□□□□ -1.17
CD44-215ENST00000525241 TRPA1O75762 1119 aa7.73□□□□□ -1.17
CD44-215ENST00000525241 AFF1P51825 1210 aaKnown RBP7.73□□□□□ -1.17
CD44-215ENST00000525241 SETDB2Q96T68 719 aa7.73□□□□□ -1.17
CD44-215ENST00000525241 ZKSCAN3Q9BRR0 538 aa7.73□□□□□ -1.17
CD44-215ENST00000525241 PBX4Q9BYU1 374 aa7.73□□□□□ -1.17
CD44-215ENST00000525241 WWC3Q9ULE0 1092 aa7.73□□□□□ -1.17
CD44-215ENST00000525241 A0A1W2PP55 124 aa7.72□□□□□ -1.17
CD44-215ENST00000525241 IRS1P35568 1242 aa7.72□□□□□ -1.17
CD44-215ENST00000525241 EPS8L3Q8TE67 593 aaKnown RBP7.72□□□□□ -1.17
CD44-215ENST00000525241 HHIPQ96QV1 700 aa7.72□□□□□ -1.17
CD44-215ENST00000525241 POP1Q99575 1024 aaKnown RBP7.72□□□□□ -1.17
CD44-215ENST00000525241 OSMRQ99650 979 aa7.72□□□□□ -1.17
CD44-215ENST00000525241 NPHS2Q9NP85 383 aa7.72□□□□□ -1.17
CD44-215ENST00000525241 NID1P14543 1247 aa7.71□□□□□ -1.18
CD44-215ENST00000525241 KIAA0319Q5VV43 1072 aa7.71□□□□□ -1.18
CD44-215ENST00000525241 CEP135Q66GS9 1140 aa7.71□□□□□ -1.18
CD44-215ENST00000525241 ADAMTSL4Q6UY14 1074 aa7.71□□□□□ -1.18
CD44-215ENST00000525241 ILDR2Q71H61 639 aa7.71□□□□□ -1.18
CD44-215ENST00000525241 FBXO33Q7Z6M2 555 aa7.71□□□□□ -1.18
CD44-215ENST00000525241 STK17AQ9UEE5 414 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms