RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 CHRNA4P43681 627 aa8.24□□□□□ -1.09
HMGB1P1-201ENST00000522557 FKBP4Q02790 459 aaKnown RBP eCLIP8.24□□□□□ -1.09
HMGB1P1-201ENST00000522557 TRIM28Q13263 835 aaKnown RBP8.24□□□□□ -1.09
HMGB1P1-201ENST00000522557 ZNF211Q13398 564 aaPredicted RBP8.24□□□□□ -1.09
HMGB1P1-201ENST00000522557 COL13A1Q5TAT6 717 aaPredicted RBP8.24□□□□□ -1.09
HMGB1P1-201ENST00000522557 TTC39BQ5VTQ0 682 aaPredicted RBP8.24□□□□□ -1.09
HMGB1P1-201ENST00000522557 CD163Q86VB7 1156 aa8.24□□□□□ -1.09
HMGB1P1-201ENST00000522557 DMRTC2Q8IXT2 367 aaPredicted RBP8.24□□□□□ -1.09
HMGB1P1-201ENST00000522557 OR13H1Q8NG92 308 aa8.24□□□□□ -1.09
HMGB1P1-201ENST00000522557 SPOCK3Q9BQ16 436 aa8.24□□□□□ -1.09
HMGB1P1-201ENST00000522557 SMG9Q9H0W8 520 aaKnown RBP8.24□□□□□ -1.09
HMGB1P1-201ENST00000522557 FRRS1LQ9P0K9 344 aa8.24□□□□□ -1.09
HMGB1P1-201ENST00000522557 SPDYE3A6NKU9 549 aa8.23□□□□□ -1.09
HMGB1P1-201ENST00000522557 MSTNO14793 375 aa8.23□□□□□ -1.09
HMGB1P1-201ENST00000522557 IGHA1P01876 353 aa8.23□□□□□ -1.09
HMGB1P1-201ENST00000522557 PDGFAP04085 211 aa8.23□□□□□ -1.09
HMGB1P1-201ENST00000522557 SPATA31C1P0DKV0 1188 aa8.23□□□□□ -1.09
HMGB1P1-201ENST00000522557 SOX18P35713 384 aa8.23□□□□□ -1.09
HMGB1P1-201ENST00000522557 ILDR2Q71H61 639 aa8.23□□□□□ -1.09
HMGB1P1-201ENST00000522557 ELP3Q9H9T3 547 aa8.23□□□□□ -1.09
HMGB1P1-201ENST00000522557 TMEM63CQ9P1W3 806 aa8.23□□□□□ -1.09
HMGB1P1-201ENST00000522557 PROCP04070 461 aa8.22□□□□□ -1.09
HMGB1P1-201ENST00000522557 CYP2E1P05181 493 aaPredicted RBP8.22□□□□□ -1.09
HMGB1P1-201ENST00000522557 HOXD8P13378 290 aaPredicted RBP8.22□□□□□ -1.09
HMGB1P1-201ENST00000522557 MZF1P28698 734 aaPredicted RBP8.22□□□□□ -1.09
HMGB1P1-201ENST00000522557 SERPINB4P48594 390 aa8.22□□□□□ -1.09
HMGB1P1-201ENST00000522557 AAMPQ13685 434 aa8.22□□□□□ -1.09
HMGB1P1-201ENST00000522557 GRIK4Q16099 956 aa8.22□□□□□ -1.09
HMGB1P1-201ENST00000522557 C8orf34Q49A92 452 aa8.22□□□□□ -1.09
HMGB1P1-201ENST00000522557 PRRT3Q5FWE3 981 aa8.22□□□□□ -1.09
HMGB1P1-201ENST00000522557 DNAJC14Q6Y2X3 702 aaPredicted RBP8.22□□□□□ -1.09
HMGB1P1-201ENST00000522557 TTC9Q92623 222 aa8.22□□□□□ -1.09
HMGB1P1-201ENST00000522557 PLD4Q96BZ4 506 aa8.22□□□□□ -1.09
HMGB1P1-201ENST00000522557 POLIQ9UNA4 740 aa8.22□□□□□ -1.09
HMGB1P1-201ENST00000522557 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.22□□□□□ -1.09
HMGB1P1-201ENST00000522557 A0A0A0MRY4 1105 aa8.21□□□□□ -1.1
HMGB1P1-201ENST00000522557 SOWAHDA6NJG2 315 aa8.21□□□□□ -1.1
HMGB1P1-201ENST00000522557 FAM13AO94988 1023 aa8.21□□□□□ -1.1
HMGB1P1-201ENST00000522557 GHRHP01286 108 aa8.21□□□□□ -1.1
HMGB1P1-201ENST00000522557 SF3B2Q13435 895 aaKnown RBP8.21□□□□□ -1.1
HMGB1P1-201ENST00000522557 CCDC27Q2M243 656 aa8.21□□□□□ -1.1
HMGB1P1-201ENST00000522557 ALKBH2Q6NS38 261 aa8.21□□□□□ -1.1
HMGB1P1-201ENST00000522557 ZNF438Q7Z4V0 828 aa8.21□□□□□ -1.1
HMGB1P1-201ENST00000522557 CCER1Q8TC90 406 aaPredicted RBP8.21□□□□□ -1.1
HMGB1P1-201ENST00000522557 ABI2Q9NYB9 513 aaPredicted RBP8.21□□□□□ -1.1
HMGB1P1-201ENST00000522557 CNTN3Q9P232 1028 aa8.21□□□□□ -1.1
HMGB1P1-201ENST00000522557 FZD6O60353 706 aa8.2□□□□□ -1.1
HMGB1P1-201ENST00000522557 ECM1Q16610 540 aa8.2□□□□□ -1.1
HMGB1P1-201ENST00000522557 MSL1Q68DK7 614 aa8.2□□□□□ -1.1
HMGB1P1-201ENST00000522557 PDE12Q6L8Q7 609 aaKnown RBP8.2□□□□□ -1.1
HMGB1P1-201ENST00000522557 CCDC87Q9NVE4 849 aa8.2□□□□□ -1.1
HMGB1P1-201ENST00000522557 AMOTL2Q9Y2J4 779 aa8.2□□□□□ -1.1
HMGB1P1-201ENST00000522557 RPLP1P05386 114 aaKnown RBP8.19□□□□□ -1.1
HMGB1P1-201ENST00000522557 PCSK2P16519 638 aa8.19□□□□□ -1.1
HMGB1P1-201ENST00000522557 HYAL2Q12891 473 aa8.19□□□□□ -1.1
HMGB1P1-201ENST00000522557 XKR5Q6UX68 686 aa8.19□□□□□ -1.1
HMGB1P1-201ENST00000522557 EGFL7Q9UHF1 273 aa8.19□□□□□ -1.1
HMGB1P1-201ENST00000522557 ICMTO60725 284 aa8.18□□□□□ -1.1
HMGB1P1-201ENST00000522557 GDF6Q6KF10 455 aaPredicted RBP8.18□□□□□ -1.1
HMGB1P1-201ENST00000522557 WFDC8Q8IUA0 241 aa8.18□□□□□ -1.1
HMGB1P1-201ENST00000522557 C1orf127Q8N9H9 656 aa8.18□□□□□ -1.1
HMGB1P1-201ENST00000522557 TTC16Q8NEE8 873 aa8.18□□□□□ -1.1
HMGB1P1-201ENST00000522557 KANSL3Q9P2N6 904 aa8.18□□□□□ -1.1
HMGB1P1-201ENST00000522557 APBA3O96018 575 aa8.17□□□□□ -1.1
HMGB1P1-201ENST00000522557 BAG6P46379 1132 aa8.17□□□□□ -1.1
HMGB1P1-201ENST00000522557 ATP11AP98196 1134 aa8.17□□□□□ -1.1
HMGB1P1-201ENST00000522557 FMR1NBQ8N0W7 255 aaPredicted RBP8.17□□□□□ -1.1
HMGB1P1-201ENST00000522557 FOXD4L4Q8WXT5 416 aaPredicted RBP8.17□□□□□ -1.1
HMGB1P1-201ENST00000522557 RBSNQ9H1K0 784 aa8.17□□□□□ -1.1
HMGB1P1-201ENST00000522557 TRIM33Q9UPN9 1127 aa8.17□□□□□ -1.1
HMGB1P1-201ENST00000522557 SELPP16109 830 aa8.16□□□□□ -1.1
HMGB1P1-201ENST00000522557 RAC1P63000 192 aa8.16□□□□□ -1.1
HMGB1P1-201ENST00000522557 SHISA2Q6UWI4 295 aa8.16□□□□□ -1.1
HMGB1P1-201ENST00000522557 CEP120Q8N960 986 aa8.16□□□□□ -1.1
HMGB1P1-201ENST00000522557 SPACA7Q96KW9 195 aa8.16□□□□□ -1.1
HMGB1P1-201ENST00000522557 H3BRB1 525 aa8.15□□□□□ -1.1
HMGB1P1-201ENST00000522557 KIF4AO95239 1232 aa8.15□□□□□ -1.1
HMGB1P1-201ENST00000522557 ELNP15502 786 aa8.15□□□□□ -1.1
HMGB1P1-201ENST00000522557 CEP135Q66GS9 1140 aa8.15□□□□□ -1.1
HMGB1P1-201ENST00000522557 ADAMTSL4Q6UY14 1074 aa8.15□□□□□ -1.1
HMGB1P1-201ENST00000522557 NCAPG2Q86XI2 1143 aa8.15□□□□□ -1.1
HMGB1P1-201ENST00000522557 IL22RA1Q8N6P7 574 aa8.15□□□□□ -1.1
HMGB1P1-201ENST00000522557 RASSF4Q9H2L5 321 aa8.15□□□□□ -1.1
HMGB1P1-201ENST00000522557 TUT1Q9H6E5 874 aaKnown RBP8.15□□□□□ -1.1
HMGB1P1-201ENST00000522557 SALL4Q9UJQ4 1053 aa8.15□□□□□ -1.1
HMGB1P1-201ENST00000522557 CES1P23141 567 aa8.14□□□□□ -1.11
HMGB1P1-201ENST00000522557 GATA4P43694 442 aa8.14□□□□□ -1.11
HMGB1P1-201ENST00000522557 GLYCTKQ8IVS8 523 aa8.14□□□□□ -1.11
HMGB1P1-201ENST00000522557 ZNF428Q96B54 188 aa8.14□□□□□ -1.11
HMGB1P1-201ENST00000522557 CHRDQ9H2X0 955 aa8.14□□□□□ -1.11
HMGB1P1-201ENST00000522557 DEAF1O75398 565 aaPredicted RBP8.13□□□□□ -1.11
HMGB1P1-201ENST00000522557 TNFRSF21O75509 655 aa8.13□□□□□ -1.11
HMGB1P1-201ENST00000522557 TRPA1O75762 1119 aa8.13□□□□□ -1.11
HMGB1P1-201ENST00000522557 ACPPP15309 386 aa8.13□□□□□ -1.11
HMGB1P1-201ENST00000522557 FBXO11Q86XK2 927 aa8.13□□□□□ -1.11
HMGB1P1-201ENST00000522557 LACRTQ9GZZ8 138 aa8.13□□□□□ -1.11
HMGB1P1-201ENST00000522557 FOXD3Q9UJU5 478 aaPredicted RBP8.13□□□□□ -1.11
HMGB1P1-201ENST00000522557 USP5P45974 858 aa8.12□□□□□ -1.11
HMGB1P1-201ENST00000522557 ARHGAP4P98171 946 aa8.12□□□□□ -1.11
HMGB1P1-201ENST00000522557 DOC2BQ14184 412 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms