RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 SLC51AQ86UW1 340 aa29.95■■■□□ 2.38
PVT1-212ENST00000521951 DALRD3Q5D0E6 543 aaKnown RBP29.94■■■□□ 2.38
PVT1-212ENST00000521951 SP8Q8IXZ3 490 aa29.94■■■□□ 2.38
PVT1-212ENST00000521951 MINPP1Q9UNW1 487 aa29.94■■■□□ 2.38
PVT1-212ENST00000521951 ATP6V0A2Q9Y487 856 aa29.94■■■□□ 2.38
PVT1-212ENST00000521951 IL15P40933 162 aaPredicted RBP29.93■■■□□ 2.38
PVT1-212ENST00000521951 OS9Q13438 667 aaPredicted RBP29.93■■■□□ 2.38
PVT1-212ENST00000521951 CCDC136Q96JN2 1154 aa29.93■■■□□ 2.38
PVT1-212ENST00000521951 HSP90AB4PQ58FF6 505 aa29.92■■■□□ 2.38
PVT1-212ENST00000521951 C7orf43Q8WVR3 580 aa29.92■■■□□ 2.38
PVT1-212ENST00000521951 ZNF219Q9P2Y4 722 aaPredicted RBP29.92■■■□□ 2.38
PVT1-212ENST00000521951 SASH1O94885 1247 aa29.91■■■□□ 2.38
PVT1-212ENST00000521951 CHRNDQ07001 517 aa29.91■■■□□ 2.38
PVT1-212ENST00000521951 OLFM4Q6UX06 510 aa29.91■■■□□ 2.38
PVT1-212ENST00000521951 GTF3C3Q9Y5Q9 886 aa29.91■■■□□ 2.38
PVT1-212ENST00000521951 LRRC37AA6NMS7 1700 aa29.9■■■□□ 2.38
PVT1-212ENST00000521951 B4GALNT3Q6L9W6 998 aa29.9■■■□□ 2.38
PVT1-212ENST00000521951 GCC1Q96CN9 775 aa29.9■■■□□ 2.38
PVT1-212ENST00000521951 BCS1LQ9Y276 419 aa29.9■■■□□ 2.38
PVT1-212ENST00000521951 MROH5Q6ZUA9 1318 aa29.9■■■□□ 2.38
PVT1-212ENST00000521951 SRCAPQ6ZRS2 3230 aa29.89■■■□□ 2.38
PVT1-212ENST00000521951 APBB1O00213 710 aa29.89■■■□□ 2.38
PVT1-212ENST00000521951 C21orf2O43822 256 aa29.89■■■□□ 2.38
PVT1-212ENST00000521951 RAB11FIP3O75154 756 aa29.89■■■□□ 2.38
PVT1-212ENST00000521951 METTL24Q5JXM2 366 aa29.89■■■□□ 2.38
PVT1-212ENST00000521951 HELBQ8NG08 1087 aaPredicted RBP29.89■■■□□ 2.38
PVT1-212ENST00000521951 SMC5Q8IY18 1101 aa29.88■■■□□ 2.37
PVT1-212ENST00000521951 A0A1B0GUL6 1792 aa29.88■■■□□ 2.37
PVT1-212ENST00000521951 TFCP2Q12800 502 aa29.87■■■□□ 2.37
PVT1-212ENST00000521951 ERC1Q8IUD2 1116 aa29.87■■■□□ 2.37
PVT1-212ENST00000521951 ANKRD2Q9GZV1 360 aa29.87■■■□□ 2.37
PVT1-212ENST00000521951 TMX4Q9H1E5 349 aaPredicted RBP29.87■■■□□ 2.37
PVT1-212ENST00000521951 CEP126Q9P2H0 1117 aa29.87■■■□□ 2.37
PVT1-212ENST00000521951 GPSM2P81274 684 aa29.86■■■□□ 2.37
PVT1-212ENST00000521951 VGLL2Q8N8G2 317 aa29.86■■■□□ 2.37
PVT1-212ENST00000521951 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.86■■■□□ 2.37
PVT1-212ENST00000521951 TAF5LO75529 589 aa29.86■■■□□ 2.37
PVT1-212ENST00000521951 CC2D2BQ6DHV5 1058 aa29.86■■■□□ 2.37
PVT1-212ENST00000521951 RHPN1Q8TCX5 695 aa29.86■■■□□ 2.37
PVT1-212ENST00000521951 KDM2BQ8NHM5 1336 aa29.85■■■□□ 2.37
PVT1-212ENST00000521951 KIF1BPQ96EK5 621 aa29.85■■■□□ 2.37
PVT1-212ENST00000521951 NSFL1CQ9UNZ2 370 aaKnown RBP29.85■■■□□ 2.37
PVT1-212ENST00000521951 ARFGEF1Q9Y6D6 1849 aa29.85■■■□□ 2.37
PVT1-212ENST00000521951 PDE8BO95263 885 aa29.84■■■□□ 2.37
PVT1-212ENST00000521951 ANKIB1Q9P2G1 1089 aa29.84■■■□□ 2.37
PVT1-212ENST00000521951 XDHP47989 1333 aa29.83■■■□□ 2.37
PVT1-212ENST00000521951 MPNDQ8N594 471 aa29.83■■■□□ 2.37
PVT1-212ENST00000521951 LRRCC1Q9C099 1032 aa29.83■■■□□ 2.37
PVT1-212ENST00000521951 PODXL2Q9NZ53 605 aa29.83■■■□□ 2.37
PVT1-212ENST00000521951 CCDC93Q567U6 631 aa29.82■■■□□ 2.36
PVT1-212ENST00000521951 WTIPA6NIX2 430 aaPredicted RBP29.81■■■□□ 2.36
PVT1-212ENST00000521951 SOGA3Q5TF21 947 aa29.81■■■□□ 2.36
PVT1-212ENST00000521951 CENPQQ7L2Z9 268 aaPredicted RBP29.81■■■□□ 2.36
PVT1-212ENST00000521951 IL1RAPL2Q9NP60 686 aa29.81■■■□□ 2.36
PVT1-212ENST00000521951 LTBP1Q14766 1721 aa29.81■■■□□ 2.36
PVT1-212ENST00000521951 SNED1Q8TER0 1413 aa29.81■■■□□ 2.36
PVT1-212ENST00000521951 SNAP23O00161 211 aa29.81■■■□□ 2.36
PVT1-212ENST00000521951 SMARCA5O60264 1052 aaPredicted RBP29.81■■■□□ 2.36
PVT1-212ENST00000521951 ANKRD45Q5TZF3 282 aa29.81■■■□□ 2.36
PVT1-212ENST00000521951 GRIPAP1Q4V328 841 aa29.8■■■□□ 2.36
PVT1-212ENST00000521951 DPP8Q6V1X1 898 aaPredicted RBP29.8■■■□□ 2.36
PVT1-212ENST00000521951 ATP2B4P23634 1241 aa29.79■■■□□ 2.36
PVT1-212ENST00000521951 RTKN2Q8IZC4 609 aa29.79■■■□□ 2.36
PVT1-212ENST00000521951 GPR108Q9NPR9 543 aa29.79■■■□□ 2.36
PVT1-212ENST00000521951 GGA1Q9UJY5 639 aa29.79■■■□□ 2.36
PVT1-212ENST00000521951 LEMD3Q9Y2U8 911 aa29.79■■■□□ 2.36
PVT1-212ENST00000521951 FGFR2P21802 821 aa29.78■■■□□ 2.36
PVT1-212ENST00000521951 UBE4AQ14139 1066 aa29.78■■■□□ 2.36
PVT1-212ENST00000521951 PUM3Q15397 648 aaKnown RBP29.78■■■□□ 2.36
PVT1-212ENST00000521951 TBC1D16Q8TBP0 767 aa29.78■■■□□ 2.36
PVT1-212ENST00000521951 POLLQ9UGP5 575 aa29.78■■■□□ 2.36
PVT1-212ENST00000521951 AKAP2Q9Y2D5 859 aa29.78■■■□□ 2.36
PVT1-212ENST00000521951 ZNF804BA4D1E1 1349 aa29.78■■■□□ 2.36
PVT1-212ENST00000521951 ATP2B3Q16720 1220 aa29.77■■■□□ 2.36
PVT1-212ENST00000521951 TNNI3KQ59H18 835 aa29.77■■■□□ 2.36
PVT1-212ENST00000521951 PELP1Q8IZL8 1130 aaKnown RBP29.77■■■□□ 2.36
PVT1-212ENST00000521951 BCL11AQ9H165 835 aa29.77■■■□□ 2.36
PVT1-212ENST00000521951 FPGT-TNNI3KV9GXZ4 949 aa29.77■■■□□ 2.36
PVT1-212ENST00000521951 UFL1O94874 794 aa29.76■■■□□ 2.36
PVT1-212ENST00000521951 YBX3P16989 372 aaKnown RBP eCLIP29.76■■■□□ 2.36
PVT1-212ENST00000521951 KCNJ4P48050 445 aa29.76■■■□□ 2.36
PVT1-212ENST00000521951 TIMM10P62072 90 aa29.76■■■□□ 2.36
PVT1-212ENST00000521951 NUCB1Q02818 461 aa29.76■■■□□ 2.36
PVT1-212ENST00000521951 DUOX1Q9NRD9 1551 aa29.76■■■□□ 2.35
PVT1-212ENST00000521951 FER1L6Q2WGJ9 1857 aa29.76■■■□□ 2.35
PVT1-212ENST00000521951 C6orf229H3BNL8 230 aa29.76■■■□□ 2.35
PVT1-212ENST00000521951 CLASRPQ8N2M8 674 aaKnown RBP29.76■■■□□ 2.35
PVT1-212ENST00000521951 EAF2Q96CJ1 260 aaPredicted RBP29.76■■■□□ 2.35
PVT1-212ENST00000521951 RTFDC1Q9BY42 306 aaPredicted RBP29.76■■■□□ 2.35
PVT1-212ENST00000521951 A0A1B0GUL7 405 aa29.75■■■□□ 2.35
PVT1-212ENST00000521951 LPIN2Q92539 896 aa29.75■■■□□ 2.35
PVT1-212ENST00000521951 ZBTB47Q9UFB7 747 aaPredicted RBP29.75■■■□□ 2.35
PVT1-212ENST00000521951 ZNF609O15014 1411 aa29.74■■■□□ 2.35
PVT1-212ENST00000521951 GPR101Q96P66 508 aaPredicted RBP29.74■■■□□ 2.35
PVT1-212ENST00000521951 CHD1LQ86WJ1 897 aa29.73■■■□□ 2.35
PVT1-212ENST00000521951 NEUROD6Q96NK8 337 aa29.73■■■□□ 2.35
PVT1-212ENST00000521951 PSMD1Q99460 953 aa29.73■■■□□ 2.35
PVT1-212ENST00000521951 SLC5A1P13866 664 aa29.72■■■□□ 2.35
PVT1-212ENST00000521951 FKBP4Q02790 459 aaKnown RBP eCLIP29.72■■■□□ 2.35
PVT1-212ENST00000521951 AACSQ86V21 672 aa29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms